D3A :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,230,768	C→T	K138K (AAG→AAA)	SAUSA300_RS11390 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,230,768	0	C	T	99.8%	1276.0 / NA	448	K138K (AAG→AAA)	SAUSA300_RS11390	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (92/355); minor base A (0/1); total (92/356)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 456 total aligned reads displayed.

CACGTTCGCCACCAATCTTTTTCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGCTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCGACCAC‑GATCGGATCCTTCATATGCTGAAA  >  NC_007793/2230671‑2230860

cACGTTCGCCACCAATCTTTTTCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGttt                                                                                             <  1:5374662/100‑1 (MQ=255)

cACGTTCGCCACCAATCTTTTTCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGttt                                                                                             <  1:4483085/100‑1 (MQ=255)

cACGTTCGCCACCAATCTTTTTCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGttt                                                                                             <  1:2018446/100‑1 (MQ=255)

   gTTCGCCACCAATCTTTTTCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAat                                                                                          <  1:6439924/100‑1 (MQ=255)

      cGCCACCAATCTTTTTCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATatg                                                                                       <  1:5468848/100‑1 (MQ=255)

       gCCACCAATCTTTTTCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATatgc                                                                                      <  1:272311/100‑1 (MQ=255)

       gCCACCAATCTTTTTCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATatgc                                                                                      <  1:373263/100‑1 (MQ=255)

       gCCACCAATCTTTTTCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATatgc                                                                                      <  1:4736463/100‑1 (MQ=255)

        ccaccaATCTTTTTCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATatgca                                                                                     <  1:3272019/100‑1 (MQ=255)

        ccaccaATCTTTTTCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATatgca                                                                                     <  1:5623731/100‑1 (MQ=255)

          accaATCTTTTTCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATatgcatg                                                                                   <  1:4228472/100‑1 (MQ=255)

          accaATCTTTTTCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATatgcatg                                                                                   <  1:4358037/100‑1 (MQ=255)

          accaATCTTTTTCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATatgcaca                                                                                   <  1:1498142/100‑3 (MQ=255)

           ccaATCTTTTTCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATatgcatgt                                                                                  <  1:3321416/100‑2 (MQ=255)

           ccaATCTTTTTCGGCCTAGATGTGGCAATAGCTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATatgcaggc                                                                                  <  1:870598/100‑1 (MQ=255)

             aaTCTTTTTCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCt                                                                                <  1:2580356/100‑1 (MQ=255)

             aaTCTTTTTCGGCCCAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCt                                                                                <  1:4847013/100‑1 (MQ=255)

             aaTCTTTTTCGGCCCAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCt                                                                                <  1:4900152/100‑1 (MQ=255)

              aTCTTTTTCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATatgcatgcagt                                                                               <  1:1552950/100‑4 (MQ=255)

              aTCTTTTTCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTa                                                                               <  1:2088712/100‑1 (MQ=255)

               tCTTTTTCGGCTTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTAt                                                                              <  1:376942/100‑1 (MQ=255)

               tCTTTTTCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCtgc                                                                              <  1:6222070/100‑3 (MQ=255)

               tCTTTTTCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTAt                                                                              <  1:6312802/100‑1 (MQ=255)

               gatcttttGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTac                                                                              <  1:4029990/96‑2 (MQ=255)

               gatctttCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTAt                                                                              <  1:2415115/96‑1 (MQ=255)

                cTTTTTCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCtgta                                                                             <  1:5565535/100‑4 (MQ=255)

                cTTTTTCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTAtt                                                                             <  1:5305017/100‑1 (MQ=255)

                  ttttCGGCCTAGATGTGGCCATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTaa                                                                           >  1:1714110/1‑100 (MQ=255)

                  ttttCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTaa                                                                           >  1:1438837/1‑100 (MQ=255)

                  ttttCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTaa                                                                           >  1:4067992/1‑100 (MQ=255)

                  ttttCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTaa                                                                           >  1:4176780/1‑100 (MQ=255)

                  ttttCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTaa                                                                           >  1:3681658/1‑100 (MQ=255)

                  ttttCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTaa                                                                           >  1:3459776/1‑100 (MQ=255)

                  ttttCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTaa                                                                           >  1:2461311/1‑100 (MQ=255)

                  ttttCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTaa                                                                           >  1:438960/1‑100 (MQ=255)

                  ttttCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTaa                                                                           >  1:3087633/1‑100 (MQ=255)

                  ttttCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTaa                                                                           >  1:2935263/1‑100 (MQ=255)

                  ttttCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTaa                                                                           >  1:6241792/1‑100 (MQ=255)

                  ttttCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTaa                                                                           >  1:2888311/1‑100 (MQ=255)

                  ttttCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGCCCTTACAGGCACACATACATGTTTAATATGCATGCCTATTaa                                                                           >  1:2676671/1‑100 (MQ=255)

                  ttttCGGCCTAGATGTGGCAATAGTTACAATTGCCTGGCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTGTTaa                                                                           >  1:5040858/1‑100 (MQ=255)

                     tCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTacggg                                                                        <  1:6176968/100‑5 (MQ=255)

                       ggCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGttg                                                                      <  1:4294578/100‑2 (MQ=255)

                           tAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGAcc                                                                  <  1:3342562/100‑1 (MQ=255)

                           tAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGAcc                                                                  <  1:5685531/100‑1 (MQ=255)

                            aGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCa                                                                 >  1:1156825/1‑100 (MQ=255)

                            aGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCa                                                                 >  1:5970661/1‑100 (MQ=255)

                                    cAATAGTTACAATTGCCTGTCCTACTTGCTTTGCTGAGGTTCTTGCTGGTACACATTCATTTTTAATATGCTTTCCTATTATCGTTTGTCCAATATCAAt                                                         <  1:5643278/100‑1 (MQ=255)

                                         gTTACAATTGCCTGGCCTACTTGCTTTACTGAGTTCCGTACAGGTACACATACATGATTAATAAGCATGCCTATTAACGTTTGACCAATATCAATTCcac                                                    <  1:4970125/100‑1 (MQ=255)

                                          ttACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCcaca                                                   <  1:680667/100‑1 (MQ=255)

                                          ttACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCcaca                                                   <  1:121781/100‑1 (MQ=255)

                                          ttACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCcaca                                                   <  1:2339302/100‑1 (MQ=255)

                                          ttACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCcaca                                                   <  1:3638745/100‑1 (MQ=255)

                                          ttACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCcaca                                                   <  1:6374289/100‑1 (MQ=255)

                                          ttACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCcaca                                                   <  1:4444781/100‑1 (MQ=255)

                                          ttACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCcaca                                                   <  1:4777155/100‑1 (MQ=255)

                                           tACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCcaggc                                                  <  1:2549643/100‑4 (MQ=255)

                                           tACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCcacac                                                  <  1:3149153/100‑2 (MQ=255)

                                            cttccgatcTGTCCTGCTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACaaa                                                 <  1:2799102/92‑2 (MQ=255)

                                              aaTTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGa                                               <  1:4194666/100‑1 (MQ=255)

                                                ttGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAAc                                             <  1:5020751/100‑1 (MQ=255)

                                                    cagTCCTACTTGCTTTACTGAGTTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTa                                         <  1:1840407/98‑1 (MQ=255)

                                                        ccTACTTGCTTTACTGAGGTCCTTACAGGAACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAatat                                     >  1:3603973/1‑100 (MQ=255)

                                                          tACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGt                                   >  1:1317659/1‑100 (MQ=255)

                                                          tACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGt                                   >  1:51500/1‑100 (MQ=255)

                                                           aCTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGtt                                  >  1:525277/1‑100 (MQ=255)

                                                           aCTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGtt                                  >  1:4513416/1‑100 (MQ=255)

                                                           aCTTGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGtt                                  >  1:1984137/1‑100 (MQ=255)

                                                           aCTCGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGtt                                  >  1:2482310/1‑100 (MQ=255)

                                                             ttGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCg                                <  1:6517735/100‑1 (MQ=255)

                                                              tGCTTTACTGAGGTCCTTACAGGTACACGTACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCGa                               >  1:1630905/1‑100 (MQ=255)

                                                              tGCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCCTGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCGa                               >  1:5892529/1‑100 (MQ=255)

                                                               gCTTTACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCgcc                              >  1:3410376/1‑98 (MQ=255)

                                                                 tttACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCGACCa                            <  1:5403417/100‑1 (MQ=255)

                                                                 tttACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCGACCa                            <  1:1025955/100‑1 (MQ=255)

                                                                 tttACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCGACCa                            <  1:6055381/100‑1 (MQ=255)

                                                                   tACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCGACCAC‑g                         <  1:1377341/100‑1 (MQ=255)

                                                                   tACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCGACCAC‑g                         <  1:1240151/100‑1 (MQ=255)

                                                                   tACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCGACCAC‑g                         <  1:2138624/100‑1 (MQ=255)

                                                                   tACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCGACCAC‑g                         <  1:2904289/100‑1 (MQ=255)

                                                                   tACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCGACCAC‑g                         <  1:2667755/100‑1 (MQ=255)

                                                                   tACTGAGGTCCTTACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATGCCACAAGGAACAGTAATATGTTCGACCAC‑g                         <  1:4656076/100‑1 (MQ=255)

                                                                               tACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCGACCACAGATCGGaagagc              >  1:2772209/1‑95 (MQ=255)

                                                                               tACAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCGACCA‑‑GATCGGaagagcac            >  1:3914405/1‑93 (MQ=255)

                                                                                 cAGGTACACATACATGTTTAATATGCATTCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCGCCCAC‑GATCGGATCCTTCat           <  1:4105813/100‑1 (MQ=255)

                                                                                 cAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCGACCAC‑GATCGGATCCTTCat           <  1:224145/100‑1 (MQ=255)

                                                                                 cAGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCGACCAC‑GATCGGATCCTTCat           <  1:818588/100‑1 (MQ=255)

                                                                                  aGGTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCGACCAC‑GATCGGATCCtagggg          <  1:3845926/100‑6 (MQ=255)

                                                                                   ggTACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCGACCAC‑GATCGGATCCTTCatat         <  1:5220455/100‑1 (MQ=255)

                                                                                     tACACATACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCTCAAGGATCAGTAATATGTTCGACCAC‑GATCGGATCCTTCATATgg       <  1:5759729/100‑2 (MQ=255)

                                                                                       cacaTACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCGACCAC‑GATCGGATCCTTCATATGCTg     <  1:4583909/100‑1 (MQ=255)

                                                                                       cacaTACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCGACCAC‑GATCGGATCCTTCATATGCTg     <  1:4686092/100‑1 (MQ=255)

                                                                                       cacaTACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCGACCAC‑GATCGGATCCTTCATATGCTg     <  1:3993605/100‑1 (MQ=255)

                                                                                       cacaTACATGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCGACCAC‑GATCGGATCCTTCATATGCTg     <  1:3798421/100‑1 (MQ=255)

                                                                                        acatacatGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCGACCTC‑GATCGGATCCTTCATATGCTgg    <  1:2184794/100‑2 (MQ=255)

                                                                                        acatacatGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCGACCAC‑GATCGGATCCTTCATATGCTgt    <  1:3437959/100‑2 (MQ=255)

                                                                                        acatacatGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCGACCAC‑GATCGGATCCTTCATATGCTgg    <  1:106053/100‑2 (MQ=255)

                                                                                         catacatGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCGACCAC‑AATCGGATCCTTCATATGCttag   <  1:6128110/100‑4 (MQ=255)

                                                                                          atacatGTTTAATATGTATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATGTGTTCGACCAC‑GATCGGATCCTTCATATGCTGaaa  <  1:5276373/100‑1 (MQ=255)

                                                                                          atacatGTTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCGACCAC‑GATCGGATCCTTCATATGCTGaaa  <  1:6481692/100‑1 (MQ=255)

CACGTTCGCCACCAATCTTTTTCGGCCTAGATGTGGCAATAGTTACAATTGCCTGTCCTACTTGCTTTACTGAGGTCCTTACAGGTACACATACATGCTTAATATGCATGCCTATTAACGTTTGACCAATATCAATTCCACAAGGAACAGTAATATGTTCGACCAC‑GATCGGATCCTTCATATGCTGAAA  >  NC_007793/2230671‑2230860

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`