Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,120,665	A→C	L10V (TTA→GTA)	SAUSA300_RS10770 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,120,665	0	A	C	100.0%	10.2 / NA	6	L10V (TTA→GTA)	SAUSA300_RS10770	hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base C (5/1);  total (5/1)

CCACGCTGTAGTGAAGTACAGCAATGGCATAAGCACAATCGCTAAGACTGTGAAACATAGCACTGCTAATAGGTAGCTTTTATATGTGTCGCTCATTTTATTCTCTCCTTATATATTTCATTGAAATGCTCATCGACGAATTTATTCATCTTTCTTGCGTT  >  NC_007793/2120597‑2120757                                                                     |                                                                                             ccATGCAGTAGTGAAGTATAGAAACGGCATAAGTACAATTGCTAAGACTGTAAAGCACAGTACTGCTACTAGGTAGCTTTTATAAATGTTGCTCATTTTa                                                               >  1:3082779/1‑100 (MQ=255) ccATGCAGTAGTGAAGTATAGAAACGGCATAAGTACAATTGCTAAGACTGTAAAGCACAGTACTGCTACTAGGTAGCTTTTATAAATGTTGCTCATTTTa                                                               >  1:390789/1‑100 (MQ=255)                                         gCTAAGACTGTAAAGCACAGTACTGCTACTAGGTAGCTTTTATAAATGTTGCTCATTTTATTCTCTCCTTATATATTTCATTGAAATGCTCATCGACGaa                       >  1:1255198/1‑100 (MQ=25)                                         gCTAAGACTGTAAAGCACAGTACTGCTACTAGGTAGCTTTTATAAATGTTGCTCATTTTATTCTCTCCTTATATATTTCATTGAAATGCTCATCGACGaa                       >  1:5866592/1‑100 (MQ=25)                                                       ctgcagtaCTGCTACTAGGTAGCTTTTATAAATGTTGCTCATTTTATTCTCTCCTTATATATTTCATTGAAATGCTCATCGACGAATTTATTCAtctttc         >  1:5309111/8‑100 (MQ=255)                                                              aCTGCTACTAGGTAGCTTTTATAAATGTTGCTCATTTTATTCTCTCCTTATATATTTCATTGAAATGCTCATCGACGAATTTATTCATCTTTCTTGCGtt  <  1:101600/100‑1 (MQ=255)                                                                     |                                                                                             CCACGCTGTAGTGAAGTACAGCAATGGCATAAGCACAATCGCTAAGACTGTGAAACATAGCACTGCTAATAGGTAGCTTTTATATGTGTCGCTCATTTTATTCTCTCCTTATATATTTCATTGAAATGCTCATCGACGAATTTATTCATCTTTCTTGCGTT  >  NC_007793/2120597‑2120757

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑