Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,111,559	C→T	G57S (GGT→AGT)	SAUSA300_RS10685 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,111,559	0	C	T	100.0%	17.7 / NA	10	G57S (GGT→AGT)	SAUSA300_RS10685	hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (2/8);  total (2/8)

TTTTAATCATTTCCCACACTCCCTTATATTTTCAAACAACTGACCCACTTTAATAACTGCATCCCTTTTAACTTGTTTCTCGTACTTCTCTTTCGCTTCTTCTTTACTCTCTGCCTCAACAACTGTAAACCTTTGAT  >  NC_007793/2111515‑2111651                                             |                                                                                             ccaccgtCATTTCCCACACTCCCTTATATTTTCAAACAACTGACTCACTTTAATAATTGCATCCCTTTTAACTTGCGCCTCGCACTTCTCTTTCGcttct                                       <  1:2438005/94‑1 (MQ=14)   tccgatctttCCCCCACTCCCTTATATTTTCAAACAACTGACTCACTTTAATAATTGCATCCCTTTTAACTTGCGCCTCGTACTTCTCTTTCGcttctgg                                     <  1:4781932/93‑3 (MQ=17)              ccACGCTTCCTTATATTTTCAAATAACTGACTCACTTTAATAATTGCATCCCTTTTAACTTGTTTCTCGTACTTCTCTTTCGCTTCTTCTTTACTCTCTg                          <  1:2989507/100‑1 (MQ=18)                    tCCCTTATATTTTCAAACAACTGACTCACTTTAATAATTGCATCCCTTTTAACTTGCGCCTCGTACTTCTCTTTCGCTTCTTCTTTACTCTCTGCCTcat                    <  1:3031839/100‑2 (MQ=17)                     cccTAATATTTTCAAACAACTGACTCACTTTAATAATTGCATCACTTTTAACTTGCGCCTCGTACTTCTCTTTCGCTTCTTCTTTACTCTCTGccagatc                   >  1:678923/1‑95 (MQ=17)                      ccTTGTATTTTCAAACAACTGACTCACTTTAATAATTGCATCCCTTTTAACTTGCGCCTCGTACTTCTCTTTCGCTTCTTCTTTACTCTCTGCCTcaaca                  <  1:1744293/100‑1 (MQ=17)                           tatTTTCAAACAACTGACTCACTTTAATAATTGCATCCCTTTTAACTTGCGCCTCGTACTTCTCTTTCGCTTCTTCTTTACTCTCTGCCTCAACAACTGt             <  1:3316700/100‑1 (MQ=17)                             atttCAAATAACTGACTCACTTTAATAATTGCATCCCTTTTAACTTGTTTCTCGTACTTCTCTTTCGCTTCTTCTTTACTCTCTGCCTCAACAACTGTaa           >  1:6466512/2‑100 (MQ=255)                                    acaacTGACTCACTTTAATAATTGCATCCCTTTTAACTTGCGCCTCGTACTTCTCTTTCGCTTCTTCTTTACTCTCTGCCTCAACAACTGTAAAcgtctg    <  1:366099/100‑6 (MQ=17)                                      aacTGACTCACTTTAATAATTGCATCCCTTTTAACTTGTTTCTCGTACTTCTCTTTCGCTTCTTCTTTACTCTCTGCCTCAACAACTGTAAACCTTTGAt  <  1:2596221/100‑1 (MQ=255)                                             |                                                                                             TTTTAATCATTTCCCACACTCCCTTATATTTTCAAACAACTGACCCACTTTAATAACTGCATCCCTTTTAACTTGTTTCTCGTACTTCTCTTTCGCTTCTTCTTTACTCTCTGCCTCAACAACTGTAAACCTTTGAT  >  NC_007793/2111515‑2111651

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑