Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,098,446	C→T	T954T (ACG→ACA)	SAUSA300_RS10590 ←	phage tail tape measure protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,098,446	0	C	T	100.0%	16.7 / NA	8	T954T (ACG→ACA)	SAUSA300_RS10590	phage tail tape measure protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (0/8);  total (0/8)

TATCTGTATTAGGTGTGATTACACGTTTACCATTAGGGAATTCAATTATTTCATTTCTGAAACCATTCGGACCATTTCCACGTCCTTTATCCCCAACCGTAGCGAACGTATCCCGCGCAATCTTACCGTTCTTAACTAATCTTGTAGTAGTATGTGTGTGTTCTGTACCAGTGTGTAACTTAGGTATTTTATCC  >  NC_007793/2098349‑2098542                                                                                                  |                                                                                                 taTCTGTATTTGGTGTGATTACACGTTTACCATTAGGGAATTCAATCATTTCATTTCTAAAACCATTTGGACCATTTCCGCGTCCCTTATCCCCAACTGt                                                                                                <  1:5425801/100‑1 (MQ=255) taTCTGTATTTGGTGTGATTACACGTTTACCATTAGGGAATTCAATCATTTCATTTCTAAAACCATTTGGACCATTTCCGCGTCCCTTATCCCCAACTGt                                                                                                <  1:5470077/100‑1 (MQ=255)  aTCTGTATTTGGTGTGATTACACGTTTACCATTAGGGAATTCAATCATTTCATTTCTAAAACCATTTGGACCATTTCCGCGTCCCTTATCCCCAACTGTa                                                                                               <  1:607635/100‑1 (MQ=255)                                                 tttcatttcTAAAACCATTTGGACCATTTCCGCGTCCCTTATCCCCAGCTGTAGCGAATGTGTCGCGTGTAATCTTACCGTTCTTAACTAATCTTgtagt                                                <  1:5035086/100‑1 (MQ=255)                                                            aaaCCATTTGGACCATTTCCGCGTCCCTTATCCCCAACTGTAGCGAATGTGTCACGTGTAATCTTACCGTTCTTAACTAATCTTGTAGTAGTAtgtgtgt                                     <  1:2558854/100‑1 (MQ=255)                                                            aaaCCATTTGGACCATTTCCGCGTCCCTTATCCCCAACTGTAGCGAATGTGTCACGTGTAATCTTACCGTTCTTAACTAATCTTGTAGTAGTAtgtgtgt                                     <  1:315131/100‑1 (MQ=255)                                                                      gACCATTTCCGCGTCCCTTATCCCCAACTGTAGCGAATGTGTCACGTGTAATCTTACCGTTCTTAACTAATCTTATAGTAGTATGTGTGTGCTCTGTAcc                           <  1:2149253/100‑1 (MQ=255)                                                                                               aaCTGTAGCGAATGTGTCACGTGTAATCTTACCGTTCTTAACTAATCTTGTAGTAGTATGTGTGTGCTCTGTACCAGTGTGTAACCTAGGTATTTCATcc  <  1:5942197/100‑1 (MQ=255)                                                                                                  |                                                                                                 TATCTGTATTAGGTGTGATTACACGTTTACCATTAGGGAATTCAATTATTTCATTTCTGAAACCATTCGGACCATTTCCACGTCCTTTATCCCCAACCGTAGCGAACGTATCCCGCGCAATCTTACCGTTCTTAACTAATCTTGTAGTAGTATGTGTGTGTTCTGTACCAGTGTGTAACTTAGGTATTTTATCC  >  NC_007793/2098349‑2098542

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑