Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,098,112	T→C	I1066V (ATA→GTA)	SAUSA300_RS10590 ←	phage tail tape measure protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,098,112	0	T	C	100.0%	10.4 / NA	6	I1066V (ATA→GTA)	SAUSA300_RS10590	phage tail tape measure protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (5/1);  total (5/1)

GACCATGCAGCTTTTGTTATGTCGCCTGCAATTCCCATACCTTTAGTTAAAGAATTGAAATCAATTCCAAAAGCTTCAAGTATATAATTTAAAAGTTTGCCAGGATTTTCCATAAAATCTAAAACATCGCCAACTTTATCGCCAAGCCATTTGGTACCTTTACCTAT  >  NC_007793/2098030‑2098196                                                                                   |                                                                                     gACCATGCAGCTTTTGTTATATCGCCAGCAATACCCATACCTTTAGTTAGAGAACTGAAATCAACTCCAAACGCTTGAAGTACATAATTTAAAAGTTTGc                                                                     >  1:1920715/1‑100 (MQ=255)   ccATGCAGCTTTTGTTATATCGCCAGCAATACCCATACCTTTAGTTAGAGAACTGAAATCAACTCCAAACGCTTGAAGTACATAATTTAAAAGTTTGcct                                                                   >  1:3679199/1‑99 (MQ=255)                                    cATACCTTTAGTTAGAGAACTGAAATCAACTCCAAACGCTTGAAGTACATAATTTAAAAGTTTGCCTGGATTATCGATAAAGTCCATGACATCAcccctg                                  <  1:3549708/100‑5 (MQ=255)                                    cATACCTTTAGTTAGAGAACTGAAATCAACTCCAAACGCTTGAAGTACATAATTTAAAAGTTTGCCTGGATTATCGATAAAGTCCATGACATCACCAACt                                  >  1:5756003/1‑100 (MQ=255)                                                                   ccAAACGCTTGAAGTACATAATTTAAAAGTTTGCCTGGATTATCGATAAAGTCCATGACATCACCAACTTTATCACCAAGCCACTTTGTACCTTTACCTa   >  1:5728154/1‑100 (MQ=255)                                                                    gcaacgCTTGAAGTACATAATTTAAAAGTTTGCCTGGATTATCGATAAAGTCCATGACATCACCAACTTTATCGCCAAGCCACTTTGTACCTTTACCTAt  >  1:294051/6‑100 (MQ=255)                                                                                   |                                                                                     GACCATGCAGCTTTTGTTATGTCGCCTGCAATTCCCATACCTTTAGTTAAAGAATTGAAATCAATTCCAAAAGCTTCAAGTATATAATTTAAAAGTTTGCCAGGATTTTCCATAAAATCTAAAACATCGCCAACTTTATCGCCAAGCCATTTGGTACCTTTACCTAT  >  NC_007793/2098030‑2098196

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑