| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,092,837 | T→C | L815L (TTA→TTG) | SAUSA300_RS10580 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,092,837 | 0 | T | C | 100.0% | 16.2 / NA | 8 | L815L (TTA→TTG) | SAUSA300_RS10580 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (5/3); total (5/3) | |||||||||||
CGCATATTTTGGATAAGAAGGTTTATTTCTCTATTACCGTTAATATCAATTTTATCAGCATTTAATCTAATACCACGTGGCCCCACATTTAAAGCTTGAGCCACTCCGTTATCATCATATCTGATTGTTGTTCCATCTGTAACGTTTTGGACAATCTCGTTTAATATA > NC_007793/2092748‑2092915 | cGCATATTTTGGATAAGAAGGTTTATTTCTCTATTACCGTTAATATCAATTTTATCAGCATTTAATCTAATACCACGTGGCCCCACATTCAAAGCTTGAg > 1:1668261/1‑100 (MQ=255) agGTTTATTTCTCTATTACCGTTAATATCAATTTTATCAGCATTTAATCTAATACCACGTGGCCCCACATTCAAAGCTTGAGCCACTCCGTTATcatcat < 1:497585/100‑1 (MQ=255) ttACCGTTAATATCAATTTTATCAGCATTTAATCTAATACCACGTGGCCCCACATTCAAAGCTTGAGCCACTCCGTTATCATCATATCTGATTGTTGTTc > 1:5697207/1‑100 (MQ=255) tACCGTTAATATCAATTTTATCAGCATTTAATCTAATACCACGTGGCCCCACATTCAAAGCTTGAGCCACTCCGTTATCATCATATCTGATTGTTGTTcc > 1:3677634/1‑100 (MQ=255) tatCAATTTTATCAGCATTTAATCTAATACCACGTGGCCCCACATTCAAAGCTTGAGCCACTCCGTTATCATCATATCTGATTGTTGTTCCATCTGTAAc < 1:3667078/100‑1 (MQ=255) aTTTTATCAGCATTTAATCTAATACCACGTGGCCCCACATTCAAAGCTTGAGCCACTCCGTTATCATCATATCTGATTGTTGTTCCATCTGTAACAtttg < 1:3009622/100‑2 (MQ=255) tAATCTAATACCACGTGGCCCCACATTCAAAGCTTGAGCCACTCCGTTATCATCATATCTGATTGCTGTTCCATCTGTAACATTTTGAACAACCTCGttt > 1:4809655/1‑100 (MQ=255) aaTACCACGTGGCCCCACATTCAAAGCTTGAGCCACTCCGTTATCATCATATCTGATTGTTGTTCCATCTGTAACATTTTGAACAATCTCGTTTAatata > 1:2691677/1‑100 (MQ=255) | CGCATATTTTGGATAAGAAGGTTTATTTCTCTATTACCGTTAATATCAATTTTATCAGCATTTAATCTAATACCACGTGGCCCCACATTTAAAGCTTGAGCCACTCCGTTATCATCATATCTGATTGTTGTTCCATCTGTAACGTTTTGGACAATCTCGTTTAATATA > NC_007793/2092748‑2092915 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |