Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,092,583	T→C	K900R (AAA→AGA)	SAUSA300_RS10580 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,092,583	0	T	C	100.0%	28.1 / NA	12	K900R (AAA→AGA)	SAUSA300_RS10580	hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (0/12);  total (0/12)

ATAAAGTGAACCGCCTGCGGTATTATTTCTAAACCTTAGATGTCCATCTTTAAGACGTGTGAATATATCATCGGTTGATCGTTTGCCTTTCCAAGTTCGTTGCACAATACCACCTAGTTCAATAGAATCATTCTGTATTTGAACATATCTGTTATTGTTACCGCCTTTAATTCCAATTCTATT  >  NC_007793/2092495‑2092677                                                                                         |                                                                                               ataAAGTGAACCGCCTGCGGTATTATTTCTAAATCTTAGGTGACCGTCTTGCAGTCGCGTAAAAATAGCGTCTGTTGAACGTGTCCCTCTCCAAGTACGt                                                                                     <  1:6554600/100‑1 (MQ=255)    aaGTGAACCGCCTGCGGTATTATTTCTAAATCTTAGGTGACCGTCTTTCAGTCGCGTAAAAATATCGTCTGTTGAACGTTTCCCTCTCCAAGTACGTTGc                                                                                  <  1:2092482/100‑1 (MQ=255)    aaGTGAACCGCCTGCGGTATTATTTCTAAATCTTAGGTGACCGTCTTTCAGTCGCGTAAAAATATCGTCTGTTGAACGTTTCCCCCTCCAAGTACGTTGc                                                                                  <  1:2274468/100‑1 (MQ=255)       tGAACCGCCTGCGGTATTATTTCTAAATCTTAGGTGACCGTCTTTCAGTCGCGTAAAAATATCGTCTGTTGAACGTTTCCCTCTCCAAGTACGTTGcaca                                                                               <  1:677552/100‑1 (MQ=255)                tGCGGTATTATTTCTAAATCTTAGGTGACCGTCTTTCAGTCGCGTAAAAATATCGTCTGTTGAACGTTTCCCTCTCCAAGTACGTTGCACAATACCACCt                                                                      <  1:4542301/100‑1 (MQ=255)                tGCGGTATTATTTCGAAATCTTAGGTGACCGTCTTTCAGTCGCGTAAAAATATCGTCTGTTGAACGTTTCCCTCTCCAAGTACGTTGCACAATACCACCt                                                                      <  1:4998740/100‑1 (MQ=255)                      attattTCTAAATCTTAGGTGACCGTCTTTCAGTCGCGTAAAAATATCGTCTGTTGAACGTTTCCCTCTCCAAGTACGTTGCACAATACCACCTAGTTCa                                                                <  1:1287582/100‑1 (MQ=255)                        tattTCTAAATCTTAGGTGACCGTCTTTCAGTCGCGTAAAAATATCGTCTGTTGAACGTTTCCCTCTCCAAGTACGTTGCACAATACCACCTAGTTCAAt                                                              <  1:2944374/100‑1 (MQ=255)                         attTCTAAATCTTAGGTGACCGTCTTTCAGTCGCGTAAAAATATCGTCTGTTGAACGTTTCCCTCTCCAAGTACGTTGCACAATACCACCTAGTTCagga                                                             <  1:1621047/100‑4 (MQ=255)                                  tcTTAGGTGACCGTCTTTCAGTCGCGTAAAAATATCGTCTGTTGAACGTTTCCCTCTCCAAGTACGTTGCACAATACCACCTAGTTCAATAGAATCATTc                                                    <  1:448293/99‑1 (MQ=255)                                                                             gaacGTTTCCCTCTCCAAGTACGTTGCTCAATACCACCTAGTTCAATAGAATCATTCTGTATTTGAACATATCTGTTATTGTCACCGCCTTTAATTCCag         <  1:844948/97‑2 (MQ=255)                                                                                    tcccTCTCCAAGTACGTTGCACAATACCACCTAGTTCAATAGAATCATTCTGTATTTGAACATATCTGTTATTGTCCCCGCCTTTAATTCCAATTCTAtt  <  1:5227041/98‑1 (MQ=255)                                                                                         |                                                                                               ATAAAGTGAACCGCCTGCGGTATTATTTCTAAACCTTAGATGTCCATCTTTAAGACGTGTGAATATATCATCGGTTGATCGTTTGCCTTTCCAAGTTCGTTGCACAATACCACCTAGTTCAATAGAATCATTCTGTATTTGAACATATCTGTTATTGTTACCGCCTTTAATTCCAATTCTATT  >  NC_007793/2092495‑2092677

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑