| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,092,528 | C→T | R918R (AGG→AGA) | SAUSA300_RS10580 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,092,528 | 0 | C | T | 100.0% | 33.6 / NA | 15 | R918R (AGG→AGA) | SAUSA300_RS10580 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (0/15); total (0/15) | |||||||||||
ACCGGATGAACCTCCGTCTTCGCCTTCTCCATCAATATATGTTGAAATACCAAAATGTGACATATAAAGTGAACCGCCTGCGGTATTATTTCTAAACCTTAGATGTCCATCTTTAAGACGTGTGAATATATCATCGGTTGATCGTTTGCCTTTCCAAGTTCGTTGCACAATACCACCTAGTTCAATA > NC_007793/2092432‑2092618 | aCCGGATGAACCTCCGTCTTCGCCTTCTCCATCAATATATGTTGAAATACCAAAATGTGACATATAAAGTGAACCGCCTGCGGTATTATTTCTAAATCtt < 1:6169814/100‑1 (MQ=255) tcCCTCAATATATGTTGAAATCCCAAAATGTGACATATAAAGTGAACCGCCTGCGGTATTATTTCTAAATCTTAGGTGACCGTCTTTCAGTCGCGTaaaa < 1:4152571/100‑2 (MQ=255) tcCATCAATATATGTTGAAATACCAAAATGTGACATATAAAGTGAACCGCCTGCGGTATTATTTCTAAATCTTAGGTGACCGTCTTTCAGTCGCGTaaaa < 1:3503636/100‑2 (MQ=255) atGTTGAAATACCAAAATGTGACATATAAAGTCAACCGCCTGCGGTATTATTTCTAAATCTTAGGTGACCGTCTTTCAGTCGCGTGAAAATATCGTCTGt < 1:5662151/100‑1 (MQ=255) ggTTGAAATACCAAAATGTGACATATAAAGTGAACCGCCTGCGGTATTATTTCTAAATCTTAGGTGACCGTCTTTCAGTCGCGTAAAAATATCGTCTGta < 1:3470188/99‑2 (MQ=255) gTTGAAATACCAAAATGTGACATATAAAGTGAACCGCCTGCGGTATTATTTCTAAATCTTAGGTGACCGTCTTTCAGTCGCGTAAAAATATCGTCTGTTg < 1:544055/100‑1 (MQ=255) ataAAGTGAACCGCCTGCGGTATTATTTCTAAATCTTAGGTGACCGTCTTGCAGTCGCGTAAAAATAGCGTCTGTTGAACGTGTCCCTCTCCAAGTACGt < 1:6554600/100‑1 (MQ=255) aaGTGAACCGCCTGCGGTATTATTTCTAAATCTTAGGTGACCGTCTTTCAGTCGCGTAAAAATATCGTCTGTTGAACGTTTCCCTCTCCAAGTACGTTGc < 1:2092482/100‑1 (MQ=255) aaGTGAACCGCCTGCGGTATTATTTCTAAATCTTAGGTGACCGTCTTTCAGTCGCGTAAAAATATCGTCTGTTGAACGTTTCCCCCTCCAAGTACGTTGc < 1:2274468/100‑1 (MQ=255) tGAACCGCCTGCGGTATTATTTCTAAATCTTAGGTGACCGTCTTTCAGTCGCGTAAAAATATCGTCTGTTGAACGTTTCCCTCTCCAAGTACGTTGcaca < 1:677552/100‑1 (MQ=255) tGCGGTATTATTTCTAAATCTTAGGTGACCGTCTTTCAGTCGCGTAAAAATATCGTCTGTTGAACGTTTCCCTCTCCAAGTACGTTGCACAATACCACCt < 1:4542301/100‑1 (MQ=255) tGCGGTATTATTTCGAAATCTTAGGTGACCGTCTTTCAGTCGCGTAAAAATATCGTCTGTTGAACGTTTCCCTCTCCAAGTACGTTGCACAATACCACCt < 1:4998740/100‑1 (MQ=255) attattTCTAAATCTTAGGTGACCGTCTTTCAGTCGCGTAAAAATATCGTCTGTTGAACGTTTCCCTCTCCAAGTACGTTGCACAATACCACCTAGTTCa < 1:1287582/100‑1 (MQ=255) tattTCTAAATCTTAGGTGACCGTCTTTCAGTCGCGTAAAAATATCGTCTGTTGAACGTTTCCCTCTCCAAGTACGTTGCACAATACCACCTAGTTCAAt < 1:2944374/100‑1 (MQ=255) attTCTAAATCTTAGGTGACCGTCTTTCAGTCGCGTAAAAATATCGTCTGTTGAACGTTTCCCTCTCCAAGTACGTTGCACAATACCACCTAGTTCagga < 1:1621047/100‑4 (MQ=255) | ACCGGATGAACCTCCGTCTTCGCCTTCTCCATCAATATATGTTGAAATACCAAAATGTGACATATAAAGTGAACCGCCTGCGGTATTATTTCTAAACCTTAGATGTCCATCTTTAAGACGTGTGAATATATCATCGGTTGATCGTTTGCCTTTCCAAGTTCGTTGCACAATACCACCTAGTTCAATA > NC_007793/2092432‑2092618 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |