D3A :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,087,587	A→C	T50T (ACT→ACG)	SAUSA300_RS10535 ←	peptidoglycan hydrolase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,087,587	0	A	C	99.4%	860.0 / ‑5.0	330	T50T (ACT→ACG)	SAUSA300_RS10535	peptidoglycan hydrolase
Reads supporting (aligned to +/- strand): ref base A (0/2); new base C (2/326); total (2/328)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.79e-01

Only 100 of 331 total aligned reads displayed.

ACCTCTCCTGTCGCTATATAACGACGTTGTCCACTATTAGCAATATAAGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATAGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGTTATTACCTTTAACATTGGCAACTGTGTAATAACC  >  NC_007793/2087492‑2087682

aCCTTTCCTGTCGCTATATAACAACGTTGTCCATTATTAGCAATATAAGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTg                                                                                             >  1:3207972/1‑100 (MQ=18)

 gatctcCTGTTGCTATATAACAACGTTGTCCATTATTAGCAATATAAGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGc                                                                                            <  1:1290352/98‑1 (MQ=18)

  cactcCTTTCCCTAAATGACAACGTTGTCCATTATTAGCCAAGAAAGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGct                                                                                           <  1:291149/98‑2 (MQ=255)

     tcCTGTCGCTATATAACAACGTTGTCCATTATTAGCAATATAAGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTa                                                                                        <  1:6575457/100‑1 (MQ=255)

      ccTGTCGCTATATAACAACGTTGTCCATTATTGTCAATATAAGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGAgcgttgcgttgg                                                                                       <  1:6269135/100‑3 (MQ=18)

                   aacaacGTTGTCCATTATTAGCAATATAAGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACAcc                                                                          <  1:1139326/100‑1 (MQ=255)

                    acaacgTTGTCCATTATTAGCAATATAAGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATGTTTGATCGTTGCGTTATTGGGTAATACACCt                                                                         <  1:3372513/97‑1 (MQ=18)

                     caacgTTGTCCATTATTAGCAATATAAGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCtt                                                                        <  1:199505/98‑2 (MQ=255)

                      aacgTTGTCCATTATTAGCAATATAAGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGt                                                                       <  1:5378686/99‑1 (MQ=255)

                      aacgTTGTCCATTATTAGCAATATAAGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGt                                                                       <  1:1834742/99‑1 (MQ=255)

                      aacgTTGTCCATTATTAGCAATATAAGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGt                                                                       <  1:2738528/99‑1 (MQ=255)

                      aacgTTGTCCATTATTAGCAATATAAGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGt                                                                       <  1:29641/99‑1 (MQ=255)

                      aacgTTGTCCATTATTAGCAATATAAGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGt                                                                       <  1:3881339/99‑1 (MQ=255)

                      aacgTTGTCCATTATTAGCAATATAAGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGt                                                                       <  1:3989926/99‑1 (MQ=255)

                      aacgTTGTCCATTATTAGCAATATAAGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGt                                                                       <  1:528775/99‑1 (MQ=255)

                      aacgTTGTCCATTATTAGCAATATAAGTAATCCAGCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGt                                                                       <  1:5404527/99‑1 (MQ=255)

                       acgTTGTCCATTATTAGCAATATAAGTATTCCCTCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTa                                                                      <  1:6072061/100‑1 (MQ=18)

                       acgTTGTCCATTATTAGCAATATAAGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTggt                                                                      <  1:4404373/100‑3 (MQ=255)

                       acgTTGTCCATTATTAGCAATATAAGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTgag                                                                      <  1:642882/100‑3 (MQ=255)

                       acgTTGTCCATTATTAGCAATATAAGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTa                                                                      <  1:4646387/100‑1 (MQ=255)

                       acgTTGTCCATTATTAGCAATATAAGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTa                                                                      <  1:1061706/100‑1 (MQ=255)

                       acgTTGTCCATTATTAGCAATATAAGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTa                                                                      <  1:1521214/100‑1 (MQ=255)

                        cgctGTCCATTATTAGCAATATAAGTAATACATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTaa                                                                     <  1:3364801/97‑1 (MQ=18)

                        cgTTGTCCATTATTAGCAATATAAGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTac                                                                     <  1:1368078/100‑2 (MQ=255)

                              ccATTATTAGCAATATAAGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCtgt                                                               <  1:3311162/100‑3 (MQ=255)

                              ccATTATTAGCAATATAAGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTg                                                               <  1:2671988/100‑1 (MQ=255)

                                attATTAGCAATATAAGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGaa                                                             <  1:4984576/98‑1 (MQ=255)

                                          atatAAGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAggggcag                                                   <  1:1213664/100‑7 (MQ=255)

                                              gctcttccgaTCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGcc                                               <  1:4295464/91‑1 (MQ=21)

                                              gctcttccgaTCTAACGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGcc                                               <  1:5560351/91‑1 (MQ=18)

                                              aaGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGcc                                               <  1:1802393/100‑1 (MQ=255)

                                              aaGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGcc                                               <  1:4498019/100‑1 (MQ=255)

                                              aaGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGcc                                               <  1:206116/100‑1 (MQ=255)

                                              aaGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGcc                                               <  1:2883073/100‑1 (MQ=255)

                                              aaGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGcc                                               <  1:2238780/100‑1 (MQ=255)

                                              aaGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGcc                                               <  1:815747/100‑1 (MQ=255)

                                              aaGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGcc                                               <  1:1385763/100‑1 (MQ=255)

                                              aaGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGcc                                               <  1:6221434/100‑1 (MQ=255)

                                              aaGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGcc                                               <  1:1440323/100‑1 (MQ=255)

                                              aaGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGcc                                               <  1:6128447/100‑1 (MQ=255)

                                              aaGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAAGAGcc                                               <  1:3395663/100‑1 (MQ=255)

                                               aGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCa                                              <  1:60874/100‑1 (MQ=255)

                                               aGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCa                                              <  1:119854/100‑1 (MQ=255)

                                               aGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCa                                              <  1:4054318/100‑1 (MQ=255)

                                               aGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCa                                              <  1:2273473/100‑1 (MQ=255)

                                                gTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCAt                                             <  1:4547878/100‑1 (MQ=255)

                                                gTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCAt                                             <  1:1904889/100‑1 (MQ=255)

                                                gTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCAt                                             <  1:3447809/100‑1 (MQ=255)

                                                  ttccgaTCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATca                                           <  1:55514/95‑2 (MQ=255)

                                                  aaTCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATTCTCCTGTAATTCTTGAATTAGTTGAATAGCCAtag                                           <  1:2989697/100‑3 (MQ=18)

                                                  aaTCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATcg                                           <  1:2545142/100‑2 (MQ=255)

                                                   aTCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATccc                                          <  1:5347903/100‑1 (MQ=255)

                                                    tCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCt                                         <  1:4103937/100‑1 (MQ=255)

                                                    tCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCt                                         <  1:724745/100‑1 (MQ=255)

                                                     ccATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCtg                                        <  1:1396133/100‑2 (MQ=255)

                                                     ccATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTc                                        <  1:6198035/100‑1 (MQ=255)

                                                     ccATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTc                                        <  1:5087225/100‑1 (MQ=255)

                                                     ccATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTc                                        <  1:2756609/100‑1 (MQ=255)

                                                       aTCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATccccgcc                                      <  1:5527317/100‑5 (MQ=255)

                                                       aTCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCag                                      <  1:5039545/100‑2 (MQ=255)

                                                        tCTATAGCCATCAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACg                                     <  1:4180441/100‑1 (MQ=255)

                                                         cTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCtaggga                                    <  1:6407438/100‑6 (MQ=255)

                                                         cTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTccacg                                    <  1:1598483/100‑5 (MQ=255)

                                                         cTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCAGGt                                    <  1:4365331/100‑1 (MQ=255)

                                                         cTATAGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGt                                    <  1:865614/100‑1 (MQ=255)

                                                          tataGCCATTAATGCGATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGtt                                   <  1:694056/100‑1 (MQ=255)

                                                          tataGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGtt                                   <  1:1101716/100‑1 (MQ=255)

                                                          tataGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGtt                                   <  1:3536258/100‑1 (MQ=255)

                                                          tataGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGtt                                   <  1:1004907/100‑1 (MQ=255)

                                                          tataGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGtt                                   <  1:3249382/100‑1 (MQ=255)

                                                          tataGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGtg                                   <  1:471436/100‑2 (MQ=255)

                                                          tataGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGtg                                   <  1:1683728/100‑2 (MQ=255)

                                                          tataGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGtc                                   <  1:6004654/100‑2 (MQ=255)

                                                          tataGCCATTAATGCAATATGCGCCGTCATATTTGATAGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGtt                                   <  1:5751348/100‑1 (MQ=255)

                                                           ataGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGtta                                  <  1:4611931/100‑1 (MQ=255)

                                                           ataGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGtca                                  <  1:2472333/100‑3 (MQ=255)

                                                            taGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGttat                                 <  1:3627823/100‑1 (MQ=255)

                                                            taGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGttat                                 <  1:2582091/100‑1 (MQ=255)

                                                            taGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGttac                                 <  1:2196897/100‑2 (MQ=255)

                                                            taGCCATTAATGCAATATGCGCCGTCATATTGGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGttat                                 <  1:4014943/100‑1 (MQ=255)

                                                             aGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGttatt                                <  1:3470685/100‑1 (MQ=255)

                                                             aGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGttatt                                <  1:156771/100‑1 (MQ=255)

                                                             aGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGttatt                                <  1:1511628/100‑1 (MQ=255)

                                                             aGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGttatt                                <  1:3773410/100‑1 (MQ=255)

                                                             aGCCATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGttatg                                <  1:5259697/100‑2 (MQ=255)

                                                               ccATTAATGCAATATGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGttattag                              <  1:2630784/100‑2 (MQ=255)

                                                                   tAATGCAATATGCGTCGTCATACTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGTTATTACCttt                          <  1:4884248/100‑1 (MQ=255)

                                                                          atatGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGTTATTACCTTTAACAtgg                   <  1:4447847/100‑3 (MQ=255)

                                                                            atGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGTTATTACCTTTAACATTGGc                 <  1:3167715/100‑1 (MQ=255)

                                                                            atGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGTTATTACCTTTAACATTGGc                 <  1:5663750/100‑1 (MQ=255)

                                                                            atGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGTTATTACCTTTAACATTGGc                 <  1:3049977/100‑1 (MQ=255)

                                                                            atGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGTTATTACCTTTAACATTGGc                 <  1:2876769/100‑1 (MQ=255)

                                                                             tGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGGATAGCCATCCCTCACGTTATTACCTTTAACATTGGCa                <  1:394366/100‑1 (MQ=255)

                                                                             tGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGTTATTACCTTTAACATTGGcc                <  1:5807816/100‑2 (MQ=255)

                                                                             tGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGTTATTACCTTTAACATTGGCa                <  1:3125514/100‑1 (MQ=255)

                                                                             tGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGTTATTACCTTTAACATTGGCa                <  1:2365870/100‑1 (MQ=255)

                                                                             tGCGCCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGTTATTACCTTTAACATTGGCa                <  1:6356892/100‑1 (MQ=255)

                                                                              gcgcCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGTTATTACCTTTAACATTGGCaa               <  1:5322895/100‑1 (MQ=255)

                                                                               cgcCGTCATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGTTATTACCTTTAACATTGGCaaa              <  1:885297/100‑2 (MQ=255)

                                                                                     cATATTTGATCGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGTTATTCCCTTTAACATTGGCAACTGTGta        <  1:1714205/100‑1 (MQ=255)

ACCTCTCCTGTCGCTATATAACGACGTTGTCCACTATTAGCAATATAAGTAATCCATCTATAGCCATTAATGCAATATGCGCCGTCATATTTGATAGTTGCGTTATTGGGTAATACACCTGTAATTCTTGAATTAGTTGAATAGCCATCCCTCACGTTATTACCTTTAACATTGGCAACTGTGTAATAACC  >  NC_007793/2087492‑2087682

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`