D3A :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	372,740	T→C	M109T (ATG→ACG)	SAUSA300_RS01705 →	lipase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	372,740	0	T	C	99.5%	1075.9 / ‑6.2	408	M109T (ATG→ACG)	SAUSA300_RS01705	lipase
Reads supporting (aligned to +/- strand): ref base T (2/0); new base C (392/14); total (394/14)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01

Only 100 of 408 total aligned reads displayed.

GCATAAAGAGAATGGTAAAAGTGGAACAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAATGCAAAATGATAATCAAGTAAAGC‑AAGATTCTGAACGACAAGGTTCTAAACAGTCACACCAAAATAATGCGACTAATAATACTGAACGTCAAAATGA  >  NC_007793/372642‑372836

        tgaATGGTAAAAGTGGAACAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGa                                                                                          >  1:696464/2‑100 (MQ=255)

        cccaTGGTAAAAGTGGAACAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGa                                                                                          >  1:3894526/4‑100 (MQ=255)

        acaaTGGTAAAAGTGGAACAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGa                                                                                          >  1:3869445/3‑100 (MQ=255)

         taaTGGTAAAAGTGGAACAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGAt                                                                                         >  1:5417972/2‑100 (MQ=255)

             ggTAAAAGTGGAACAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAGTCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATc                                                                                     >  1:5880213/1‑100 (MQ=255)

             ggTAAAAGTGGAACAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATc                                                                                     >  1:1387657/1‑100 (MQ=255)

             ggTAAAAGTGGAACAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATc                                                                                     >  1:2505253/1‑100 (MQ=255)

             ggTAAAAGTGGAACAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATc                                                                                     >  1:6163799/1‑100 (MQ=255)

             ggTAAAAGTGGAACAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATc                                                                                     >  1:2239718/1‑100 (MQ=255)

              ttAAAAGTGGAACAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATcc                                                                                    >  1:6257272/2‑99 (MQ=255)

               caaaaGTGGAACAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCaa                                                                                   >  1:2393193/2‑100 (MQ=255)

                aaaaGTGGAACAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAg                                                                                  >  1:244701/1‑100 (MQ=255)

                 gtaGTGGAACAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGt                                                                                 >  1:2823036/3‑100 (MQ=255)

                 aaaGTGGAACAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGt                                                                                 >  1:672580/1‑100 (MQ=255)

                  aaGTGGAACAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAGATGagagatcggaa                                                                                >  1:3778337/1‑90 (MQ=255)

                   aGTGGAACAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTaa                                                                               >  1:1426401/1‑100 (MQ=255)

                   aGTGGAACAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTaa                                                                               >  1:1710745/1‑100 (MQ=255)

                    gTGGAACAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTaaa                                                                              >  1:4973715/1‑100 (MQ=255)

                    gTGGAACAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTaaa                                                                              >  1:1062275/1‑100 (MQ=255)

                    gTGGAACAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTaaa                                                                              >  1:6620733/1‑100 (MQ=255)

                      tgccttgTGACAGAAGGTAAAGATATGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGc                                                                            >  1:5835413/7‑100 (MQ=255)

                      ggAACAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTaagac                                                                            >  1:3801866/1‑97 (MQ=255)

                      ggAACAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGc                                                                            >  1:3457209/1‑100 (MQ=255)

                       cgtacctGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGACCGCAAAATGATAATCAAGTGAAGC‑a                                                                          >  1:4444964/7‑100 (MQ=255)

                        caCAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑aa                                                                         >  1:5064112/2‑100 (MQ=255)

                         ccAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAACAGTAAAACAATCAGAACGCAAAACGATAATCAAGTAAAGC‑AAg                                                                        >  1:2632509/2‑100 (MQ=255)

                         aCAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAg                                                                        >  1:4134865/1‑100 (MQ=255)

                          ttgTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGa                                                                       >  1:4012090/3‑100 (MQ=255)

                          ttgTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGa                                                                       >  1:4105/3‑100 (MQ=255)

                          taGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGT‑AAGC‑AAGAt                                                                      >  1:2584040/2‑100 (MQ=255)

                          cAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGa                                                                       >  1:2677559/1‑100 (MQ=255)

                          cAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGa                                                                       >  1:4239738/1‑100 (MQ=255)

                           gctGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGaa                                                                      >  1:3257431/3‑99 (MQ=255)

                           cctGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGAt                                                                      >  1:4921743/3‑100 (MQ=255)

                           cctGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGAt                                                                      >  1:4596590/3‑100 (MQ=255)

                           cctGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGAt                                                                      >  1:5021675/3‑100 (MQ=255)

                           aGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGGACGCAAAATGATAATCAAGtcgcgagatcg                                                                       >  1:3613698/1‑90 (MQ=255)

                           aGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTGAAAC‑AAGAt                                                                      >  1:634588/1‑100 (MQ=255)

                           aGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGAt                                                                      >  1:5300219/1‑100 (MQ=255)

                           aGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGAt                                                                      >  1:1624734/1‑100 (MQ=255)

                           aGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGAt                                                                      >  1:1901676/1‑100 (MQ=255)

                            gTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGAtt                                                                     >  1:5615134/1‑100 (MQ=255)

                            gTGACAGAAGGAAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAggag                                                                     >  1:3068474/1‑97 (MQ=255)

                            ctGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTGAAGC‑AAGAtc                                                                     >  1:5753168/2‑99 (MQ=255)

                            ctGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAGGC‑AAGAtc                                                                     >  1:4171624/2‑99 (MQ=255)

                             tGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCaagcaaagc‑agatcgg                                                                    >  1:5186240/1‑94 (MQ=255)

                             tGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCaagcaaagc‑agatcgg                                                                    >  1:5337113/1‑94 (MQ=255)

                             tGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTGAAGC‑AAGAtcg                                                                    >  1:315754/1‑98 (MQ=255)

                             tGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGAtcg                                                                    >  1:4283570/1‑98 (MQ=255)

                             tGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGATTc                                                                    >  1:39289/1‑100 (MQ=255)

                              gACAGAAGGTAAAGATACGCTTCAATCATCGACGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGCGAAGAtcg                                                                    >  1:2199015/1‑98 (MQ=255)

                              gACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTGAAGC‑AAGAtcgg                                                                   >  1:3630764/1‑97 (MQ=255)

                              gACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTGAAGC‑AAGAtcgg                                                                   >  1:3477190/1‑97 (MQ=255)

                              gACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAGAGC‑AAGAtcgg                                                                   >  1:1156310/1‑97 (MQ=255)

                              gACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAGGC‑AAGAtcgg                                                                   >  1:861837/1‑97 (MQ=255)

                              gACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGagatc                                                                   >  1:3000028/1‑96 (MQ=255)

                              gACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGAtcgg                                                                   >  1:1098838/1‑97 (MQ=255)

                              gACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGAtcgg                                                                   >  1:6434385/1‑97 (MQ=255)

                              gACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGAtcgg                                                                   >  1:5693551/1‑97 (MQ=255)

                              gACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGAtcgg                                                                   >  1:6048082/1‑97 (MQ=255)

                              gACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGAtcgg                                                                   >  1:1925000/1‑97 (MQ=255)

                              gACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGAtcgg                                                                   >  1:2087942/1‑97 (MQ=255)

                              gACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGAtcgg                                                                   >  1:2958055/1‑97 (MQ=255)

                              gACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGATTCt                                                                   >  1:912280/1‑100 (MQ=255)

                              gACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGATTCt                                                                   >  1:4497885/1‑100 (MQ=255)

                              gACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGATTCt                                                                   >  1:369670/1‑100 (MQ=255)

                              gACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGATTCt                                                                   >  1:1943939/1‑100 (MQ=255)

                              gACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGCAAAGC‑GAGAtcgg                                                                   >  1:2177341/1‑97 (MQ=255)

                              gACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAAACAGAACGCAAAATGATAATCAAGTACAGC‑AAGAtcgg                                                                   >  1:6382319/1‑97 (MQ=255)

                              gACAGAAGGTAAAGATACGCCTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGAtcgg                                                                   >  1:5959392/1‑97 (MQ=255)

                              accAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTGAAGC‑AAGAtcgg                                                                   >  1:1220534/3‑97 (MQ=255)

                                cAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTGAAGC‑GAGAtcggaa                                                                 >  1:5514976/1‑95 (MQ=255)

                                cAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAAC‑AAGAtcggaa                                                                 >  1:5451503/1‑95 (MQ=255)

                                 ctaaGGAAAAGATACGCTTCAATCATCGAAGCATCAATCAACCCAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAAC‑AAGAtcggaag                                                                >  1:6320284/3‑94 (MQ=255)

                                   caGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAGGC‑AAGATTCTGAGCg                                                              >  1:2002611/2‑100 (MQ=255)

                                   caGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGT‑AAGC‑AAGAtcggaagagc                                                             >  1:2743761/2‑91 (MQ=255)

                                    aGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGATTCTGAACGa                                                             >  1:3384401/1‑100 (MQ=255)

                                              aCGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACGATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGATTCTGAACGACAAGGTTCTa                                                   >  1:6546063/1‑100 (MQ=255)

                                              aCGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGATTCTGAACGACAAGGTTCTa                                                   >  1:75663/1‑100 (MQ=255)

                                                       tcatcGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGATTCTGAACGACAAGGTTCTAAACAGTcac                                          <  1:3538849/100‑1 (MQ=255)

                                                           cGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGATTCTGAACGACAAGGTTCTAAACAGTCACACCa                                      >  1:4058265/1‑100 (MQ=255)

                                                            caaGCATCAATCAACACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGATTCTGAACGACAAGGTTCTAAACAGTCACACCaa                                     >  1:3342778/2‑100 (MQ=255)

                                                                 ctcaatcaaCACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGATTCTGAACGACAAGGTTCTAAACAGTCACACCAAaataa                                >  1:1488699/2‑100 (MQ=255)

                                                                  tcaatcaaCACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGATTCTGAACGACAAGGTTCTAAACAGTCACACCAAaataat                               >  1:5797746/1‑100 (MQ=255)

                                                                   caatcaaCACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGATTCTGAACGACAAGGTTCTAAACAGTCACACCAAAATAATg                              >  1:2778915/1‑100 (MQ=255)

                                                                   caatcaaCACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGATTCTGAACGACAAGGTTCTAAACAGTCACACCAAAATAATg                              >  1:4749236/1‑100 (MQ=255)

                                                                       caaCACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGATTCTGAACGACAAGGTTCTAAACAGTCACACCAAAATAATGCGAc                          >  1:2044216/1‑100 (MQ=255)

                                                                        aaCACAAAATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGATTCTGAACGACAAGGTTCTAAACAGTCACACCAAAATAATGCGACt                         >  1:1304717/1‑100 (MQ=255)

                                                                          cacaACATAGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGATTCTGAACGACAAGGTTCTAAACAGTCACACCACAATAATGCGACtaa                       >  1:4802683/1‑100 (MQ=255)

                                                                                  gctcttccgaTCTGAACGCAAAATGATAATCAGGTAAAGC‑AAGATTCTGAACGACAAGGTTCTAAACAGTCACACCAAAATAATGCGACTAATAATACTg               <  1:1514027/91‑1 (MQ=255)

                                                                                  aGTAAAACAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGATTCTGAACGACAAGGTTCTAAACAGTCACACCAAAATAATGCGACTAATAATACTg               >  1:2897223/1‑100 (MQ=255)

                                                                                     caggcAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGATTCTGAACGACAAGGTTCTAAACAGTCACACCAAAATAATGCGACTAATAATACTGAAc            >  1:4381362/5‑100 (MQ=255)

                                                                                     aaaaCAATCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGATTCTGAACGACAAGGTTCTAAACAGTCACACCAAAATAATGCGACTAATAATACTGAAc            >  1:4705718/1‑100 (MQ=255)

                                                                                         gatctaGAACGCAAAATGATAATCAAGTAAAGC‑AAGATTCTGAACGACAAGGTTCTAAACAGTCACACCAAAATAATCCGACTAATAATACTGAACGtac        <  1:1469877/95‑3 (MQ=255)

                                                                                           aTCAGAACGCAAAATGATAATCAAGTAAAGC‑AAGATTCTGAACGACAAGGTTCTAAACAGTCACACCAAAATAATGCGACTAATAATACTGaagatcgga      >  1:1791391/1‑93 (MQ=255)

                                                                                             ttgAACGCAAAATGATAATCAAGTAAAGC‑AAGATTCTGAACGACAAGGTTCTAAACAGTCACACCAAAATAATGCGACTAATAATGCTGAACGTCAAAAt    >  1:4881335/3‑100 (MQ=255)

                                                                                             gcgAACGCAAAATGATAATCAAGTAAAGC‑AAGATTCTGAACGACAAGGTTCTAAACAGTCACACCAAAATAATGCGACTAATAATACTGAACGTCAAAAt    >  1:3048907/3‑100 (MQ=255)

                                                                                              cgAACGCAAAATGATAATCAAGTAAAGC‑AAGATTCTGAACGACAAGGTTCTAAACAGTCACACCAAAATAATGCGACTAATAATACTGAACGTCAAAATg   >  1:365331/2‑100 (MQ=255)

                                                                                               gAACGCAAAATGATAATCAAGTAAAGC‑AAGATTCTGAACGACAAGGTTCTAAACAGTCACACCAAAATAATGCGACTAATAATACTGAACGTCAAAATGa  >  1:6105184/1‑100 (MQ=255)

                                                                                               gAACGCAAAATGATAATCAAGTAAAGC‑AAGATTCTGAACGACAAGGTTCTAAACAGTCACACCAAAATAATGCGACTAATAATACTGAACGTCAAAATGa  >  1:3358101/1‑100 (MQ=255)

GCATAAAGAGAATGGTAAAAGTGGAACAGTGACAGAAGGTAAAGATACGCTTCAATCATCGAAGCATCAATCAACACAAAATAGTAAAACAATCAGAATGCAAAATGATAATCAAGTAAAGC‑AAGATTCTGAACGACAAGGTTCTAAACAGTCACACCAAAATAATGCGACTAATAATACTGAACGTCAAAATGA  >  NC_007793/372642‑372836

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`