| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 1,929,175 | T→A | intergenic (‑261/‑160) | SAUSA300_RS09560 ← / → SAUSA300_RS09565 | transposase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 1,929,175 | 0 | T | A | 95.2% | 729.8 / 16.3 | 269 | intergenic (‑261/‑160) | SAUSA300_RS09560/SAUSA300_RS09565 | transposase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (7/6); new base A (254/1); total (262/7) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.41e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.64e-01 | |||||||||||
Only 100 of 304 total aligned reads displayed.
CTCAGGCGTCAATTTAGACGCAGAGAGGAGGTGTA‑T‑AAGGTGATGCTTATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCCATTGCGTTTTTTTCTTATTGGCTAAGTAGACGCAATACAAAATAGGTGACATATAGCCGCACCAATAAAAATCCCCTCACTACCGCA > NC_007793/1929078‑1929254 | ctcAGGCGTCAA‑‑TCGACGAAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGtatta > 1:2541613/1‑99 (MQ=255)ctcAGGCGTCAA‑‑TCGACGAAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGtatta > 1:1959723/1‑99 (MQ=255)ctcAGGCGTCAA‑‑TCGACGAAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGtatta > 1:3505065/1‑99 (MQ=255)ctcAGGCGTCAA‑‑TCGACGAAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGtatta > 1:6407005/1‑99 (MQ=255)atcAGGCGTCAA‑‑TCGACGAAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGCCATCAGTGGCTGTGCTGTTGCGtatta > 1:745744/2‑99 (MQ=255) cAACTTAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTAt > 1:1797487/1‑100 (MQ=255) cAACTTAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTGCGCTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTAt > 1:1424970/1‑100 (MQ=255) tgctAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTg > 1:4279011/4‑100 (MQ=255) ccttAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTAATCAGTGGCTGTGCTGTTGCGTATTATACTTATTg > 1:808598/3‑100 (MQ=255) acttAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCATATTATACTTATTg > 1:4885946/3‑100 (MQ=255) tatAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTgg > 1:1662356/3‑100 (MQ=255) tatAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTgg > 1:2226034/3‑100 (MQ=255) cttAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTgg > 1:3248128/2‑100 (MQ=255) cttAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTgg > 1:6158960/2‑100 (MQ=255) cttAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTgg > 1:4972966/2‑100 (MQ=255) cttAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTgg > 1:6245874/2‑100 (MQ=255) cttAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTgg > 1:3429492/2‑100 (MQ=255) cttAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTgg > 1:1911935/2‑100 (MQ=255) cttAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTgg > 1:5480596/2‑100 (MQ=255) cttAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTgg > 1:4443496/2‑100 (MQ=255) cttAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTgg > 1:262281/2‑100 (MQ=255) cttAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTgg > 1:2452219/2‑100 (MQ=255) cttAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTgg > 1:2470301/2‑100 (MQ=255) ctcaggcGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTgg > 1:637399/7‑100 (MQ=255) agcaggcGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTgg > 1:55559/7‑100 (MQ=255) ttAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGc > 1:4067307/1‑100 (MQ=255) ttAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGc > 1:5115454/1‑100 (MQ=255) tccggcGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGc > 1:1488371/6‑100 (MQ=255) ctAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGc > 1:893765/2‑100 (MQ=255) ctAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGc > 1:4402161/2‑100 (MQ=255) ctAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGc > 1:5221683/2‑100 (MQ=255) ctAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGc > 1:5944056/2‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGca > 1:212611/1‑99 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:3860525/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:4791607/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:5739677/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:5344073/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:4181759/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:4927272/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:4239735/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:4840842/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:4331900/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:4511624/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:4608383/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:4783637/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:1233956/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:1330037/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:1546472/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:1866671/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:2242411/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:2669630/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:3823313/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:2705022/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:111218/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:2754098/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:12028/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:2957403/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:305426/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:313733/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:3614825/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:3631838/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:3657678/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:3685068/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:1019973/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCACTCCTCAGTGGCTGCCTTGTTGCGTATTATACTTATTGGCt > 1:951275/1‑100 (MQ=255) tAGGCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGGGCACATCATAGCACCAGTCATCAGTGACTGTGCTGTTGCGTATTATACTTATTGGCt > 1:5874497/1‑100 (MQ=255) tAGACGCAGAGAGGAGGTGTA‑T‑AAGGTGATGCTTATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCCATTGCGTTTTTTTCTTATTGGcca > 1:5008233/1‑98 (MQ=255) tAGACGCAGAGAGGAGGTGTA‑T‑AAGGTGATGCTTATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCCATTGCGTTTTTTTCTTATTGGCTa < 1:3229701/100‑1 (MQ=255) ccggcGCAGAGAGGAGGTGCA‑TCACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:5425810/5‑100 (MQ=255) ccgACGCAGAGAGGAGGTGTA‑T‑AAGGTGATGCTTATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCCATTGCGTTTTTTTCTTATTGGCTa > 1:3757535/3‑100 (MQ=255) ccgACGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:2783522/3‑100 (MQ=255) caggcGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt > 1:6033614/5‑100 (MQ=255) cggcGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCtt > 1:1281760/4‑99 (MQ=255) cgACGCAGAGAGGAGGTGTA‑T‑AAGGTGATGCTTATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCCATTGCGTTTTTTTCTTATTGGCTaa > 1:6130324/2‑100 (MQ=255) aggcGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCtt > 1:6428980/4‑99 (MQ=255) aggcGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCtt > 1:6096466/4‑99 (MQ=255) aggcGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCtt > 1:6575168/4‑99 (MQ=255) aggcGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCtt < 1:6205288/97‑2 (MQ=255) aggcGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCtt > 1:6509727/4‑99 (MQ=255) aggcGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCtt > 1:6634788/4‑99 (MQ=255) aggcGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCtt > 1:5587922/4‑99 (MQ=255) aggcGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCtt > 1:5241491/4‑99 (MQ=255) aggcGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCtt > 1:5141524/4‑99 (MQ=255) aggcGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCtt > 1:4697447/4‑99 (MQ=255) aggcGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCtt > 1:4583123/4‑99 (MQ=255) aggcGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCtt > 1:3925356/4‑99 (MQ=255) aggcGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCtt > 1:3380275/4‑99 (MQ=255) aggcGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCtt > 1:2356057/4‑99 (MQ=255) aggcGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCtt > 1:1376760/4‑99 (MQ=255) aggcGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGCGGCTGTGCTGTTGCGTATTATACTTATCGGCtc > 1:4187909/4‑99 (MQ=255) aGACGCAGAGAGGAGGTGTA‑T‑AAGGTGATGCTTATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCCATTGCGTTTTTTTCTTATTGGCTat > 1:171750/1‑99 (MQ=255) ggcGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTTGCtta > 1:4366867/3‑98 (MQ=255) ggcGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCtta > 1:2997028/3‑98 (MQ=255) gcGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCTTAg > 1:1038479/2‑100 (MQ=255) ccGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCTTAg > 1:5648864/2‑100 (MQ=255) aCGCAGAGAGGAGGTGTA‑T‑AAGGTGATGCTTATTTTCGTTCACATCACAGCACCAGTCATCAGTGGCTGTGCCATTGCGTTTTTTTCTTATTGGCTAAGt < 1:2896195/100‑1 (MQ=255) aCGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCTTAg > 1:6259217/1‑100 (MQ=255) cGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCTTAGt > 1:4014104/1‑100 (MQ=255) cGCAGAGAGGAGGTGCATT‑ACTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCTTAGt > 1:1071122/1‑100 (MQ=255) aGTCATCAGTGGCTGTGCCATTGCGTTTTTTTCTTATTGGCTAAGTAGACGCAATACAAAATAGGTGACATATAGCCGCACCAATAAAAATCCCCTCACt < 1:4132452/100‑1 (MQ=255) | CTCAGGCGTCAATTTAGACGCAGAGAGGAGGTGTA‑T‑AAGGTGATGCTTATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCCATTGCGTTTTTTTCTTATTGGCTAAGTAGACGCAATACAAAATAGGTGACATATAGCCGCACCAATAAAAATCCCCTCACTACCGCA > NC_007793/1929078‑1929254 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |