| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 311,367 | T→G | L187V (TTG→GTG) | SAUSA300_RS01380 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 311,367 | 0 | T | G | 100.0% | 14.8 / NA | 8 | L187V (TTG→GTG) | SAUSA300_RS01380 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (7/1); total (7/1) | |||||||||||
ACCGTTCAATGGTTTAATATCTATGATTGTACCAACTAAGCATGCAGTTGGTATTCAATCAGAAGACGGTGTGGACATAGTCATTCATATTGGCTTGAATACAGTTGACTTGGAAGGTAAAGGGTTCAAGTGCTTTGTAAAGCAAAATGATCATGTTGAAGCAGGGCAAACGTTGTTGCAATTCGACCAG > NC_007793/311273‑311462 | actgTTCAATGGTTTAATATCTATGATTGTACCAACTAAGCATGCAGTTGGTATTCAATCAGAAGACGGTGTGGACATAGTCATTCATATTGGCGTGAAt > 1:2330757/4‑100 (MQ=255) aaTGGTTTAATATCTATGATTGTACCAACTAAGCATGCAGTTGGTATTCAATCAGAAGACGGTGTGGACATAGTCATTCATATTGGCGTGAATACAGTTg < 1:4110966/100‑1 (MQ=255) aaGCATGCAGTTGGTATTCAATCAGAAGACGGTGTGGACATAGTCATTCATATTGGCGTGAATACAGTTGACTTGGAAGGTAAAGGGTTCAAGTGCTTTg > 1:5357859/1‑100 (MQ=255) aaGCATGCAGTTGGTATTCAATCAGAAGACGGTGTGGACATAGTCATTCATATTGGCGTGAATACAGCTGGCTTGGAAGGTAAAGGGTTCAAGTGCTTTg > 1:803009/1‑100 (MQ=255) ttGCAGTTGGTATTCAATCAGAAGACGGTGTGGACATAGTCATTCATATTGGCGTGAATACAGTTGACTTGGAAGGTAAAGGGTTCAAGTGCTTTGTaaa > 1:4461769/2‑100 (MQ=255) aagaCGGTGTGGACATAGTCATTCATATTGGCGTGAATACAGTTGACTTGGAAGGTAAAGGGTTCAAGTGCTTTGTAAAGCAAAATGATCATGTTGAAGc > 1:1183174/1‑100 (MQ=255) ggACATAGTCATTCATATTGGCGTGACTACAGTTGACTTGGAAGGTAAAGGGTTCAAGTGCATTGTAAAGCAAAATGATCATGTTGAAGCAGGGCagatc > 1:4537885/1‑96 (MQ=255) tGGCGTGAATACAGTTGACTTGGAAGGTAAAGGGTTCAAGTGCTTTGTAAAGCAAAATGATCATGTTGAAGCAGGGCAAACGTTGTTGCAATTCGACCAg > 1:4395560/1‑100 (MQ=255) | ACCGTTCAATGGTTTAATATCTATGATTGTACCAACTAAGCATGCAGTTGGTATTCAATCAGAAGACGGTGTGGACATAGTCATTCATATTGGCTTGAATACAGTTGACTTGGAAGGTAAAGGGTTCAAGTGCTTTGTAAAGCAAAATGATCATGTTGAAGCAGGGCAAACGTTGTTGCAATTCGACCAG > NC_007793/311273‑311462 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |