Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007793 1,706,203 C→T R158R (AGG→AGA)  SAUSA300_RS08485 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077931,706,2030CT100.0% 399.2 / NA 145R158R (AGG→AGA) SAUSA300_RS08485hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (10/135);  total (10/135)

Only 100 of 145 total aligned reads displayed.

CACCACAACCGATACATTTTAAAATGTCAGACAATCAATTTTCCTCCCATGTGATATAACCTTTTTTACTGAAATGACGTAATAATCGCCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTCGACGATTACCACCAAAT  >  NC_007793/1706115‑1706299
                                                                                        |                                                                                                
caccacAACCGATACATTTTAAAATGTCAGACAATCAATTTTCCTCCCATGTGATATAATCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTaa                                                                                       >  1:1352808/1‑100 (MQ=255)
                        tGTCAGACAATCAATTTTCCTCCCATGTGATATAACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGcc                                                               <  1:5641718/100‑1 (MQ=255)
                           cAGACAATCAATTTTCCTCCCATGTGATATAACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATc                                                            <  1:878008/100‑1 (MQ=255)
                           cAGACAATCAATTTTCCTCCCATGTGATATAACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATc                                                            <  1:2537063/100‑1 (MQ=255)
                           cAGACAATCAATTTTCCTCCCATGTGATATAACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATc                                                            <  1:2349393/100‑1 (MQ=255)
                           cAGACAATCAATTTGCCTCCCATGTGATATAACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATc                                                            <  1:4931114/100‑1 (MQ=255)
                           acgACAATCAATTTTCCTCCCATGTGATATAACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATc                                                            >  1:4136787/3‑100 (MQ=255)
                            aGACAATCAATTTTCCTCCCATGTGATATAACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCa                                                           <  1:1083219/100‑1 (MQ=255)
                              aCAATCAATTTTCCTCCCATGTGATATAACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAga                                                         >  1:5849316/1‑99 (MQ=255)
                                   cttccgatctccCATGTGATATAACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGtt                                                    <  1:5995109/92‑1 (MQ=255)
                                   ccgatctcttccCATGTGATATAACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGtt                                                    <  1:5157724/91‑1 (MQ=255)
                                    ttccgatctccCCTGTGATATAACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGttt                                                   <  1:6244182/93‑1 (MQ=255)
                                     tccgatctccCTTGTGATATAACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTa                                                  <  1:4163532/94‑1 (MQ=255)
                                          cctccCATGTGATATAACCTTTTTTACTGAAATGACGTAAAAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTgg                                             <  1:656733/100‑1 (MQ=255)
                                           ctccCGTGTGATATAACCCTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAACCTTAGTAATAAAGCCATCAGATCggaagagcaca                                            >  1:3648444/1‑90 (MQ=255)
                                           ctccCATGTGATATAACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGa                                            <  1:2251057/100‑1 (MQ=255)
                                           ctccCATGTGATATAACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCACCAGATCggaagagcaca                                            >  1:4236140/1‑90 (MQ=255)
                                             ctcgtgtgATATAACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGaac                                          <  1:3494942/96‑1 (MQ=255)
                                             cccATGTGATATAACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGaac                                          >  1:517718/1‑100 (MQ=255)
                                             cccATGTGATATAACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGaac                                          >  1:502919/1‑100 (MQ=255)
                                             cccATGTGATATAACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGaac                                          <  1:3460094/100‑1 (MQ=255)
                                              ccATGTGATATAACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGaaca                                         <  1:4774210/100‑1 (MQ=255)
                                              ccATGTGATATAACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGaaca                                         <  1:4545865/100‑1 (MQ=255)
                                                 tgtgATATAACCTTTTTTGCTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAAcc                                      <  1:6218853/100‑1 (MQ=255)
                                                   tgATATAACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCAt                                    <  1:2424068/100‑1 (MQ=255)
                                                   tgATATAACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCAt                                    <  1:4396160/100‑1 (MQ=255)
                                                    gATATAACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAGCCATa                                   <  1:91336/100‑1 (MQ=255)
                                                    gATATAACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCagg                                   <  1:3449607/100‑3 (MQ=255)
                                                    gATATAACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATa                                   <  1:2852923/100‑1 (MQ=255)
                                                    gATATAACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATa                                   >  1:6596402/1‑100 (MQ=255)
                                                    gATATAACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATa                                   <  1:3156036/100‑1 (MQ=255)
                                                     atatAACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATac                                  <  1:5644267/100‑2 (MQ=255)
                                                      tataACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAAt                                 <  1:4720136/100‑1 (MQ=255)
                                                        taACCTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATaggca                               <  1:5787887/100‑5 (MQ=255)
                                                           ccTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGtat                            <  1:2567465/100‑1 (MQ=255)
                                                           ccTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGtat                            <  1:1499378/100‑1 (MQ=255)
                                                           ccTTTTTTACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATGAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGtat                            <  1:4371276/100‑1 (MQ=255)
                                                             ttttttACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGtatat                          <  1:5215242/100‑1 (MQ=255)
                                                             ttttttACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGtatat                          <  1:5537329/100‑1 (MQ=255)
                                                             ttttttACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGtatat                          <  1:1771539/100‑1 (MQ=255)
                                                             ttttttACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGtatat                          <  1:1987667/100‑1 (MQ=255)
                                                             ttttttACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGtatat                          <  1:4807662/100‑1 (MQ=255)
                                                             ttttttACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGtatat                          <  1:6174374/100‑1 (MQ=255)
                                                             ttttttACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGtatat                          <  1:4700889/100‑1 (MQ=255)
                                                             ttttttACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGtatat                          <  1:6483984/100‑1 (MQ=255)
                                                             ttttttACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGtatat                          <  1:4586917/100‑1 (MQ=255)
                                                             ttttttACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGtatat                          <  1:1108387/100‑1 (MQ=255)
                                                             ttttttACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGtatat                          <  1:448980/100‑1 (MQ=255)
                                                             ttttttACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGtatat                          <  1:2034589/100‑1 (MQ=255)
                                                             ttttttACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGtatat                          <  1:4430049/100‑1 (MQ=255)
                                                             ttttttACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGtatat                          <  1:2021941/100‑1 (MQ=255)
                                                             ttttttACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGtatat                          <  1:3006529/100‑1 (MQ=255)
                                                             ttttttACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGtatat                          <  1:665579/100‑1 (MQ=255)
                                                             ttttttACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGtatat                          <  1:3178152/100‑1 (MQ=255)
                                                             ttttttACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGtatat                          <  1:34784/100‑1 (MQ=255)
                                                             ttttttACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGtatat                          <  1:3837435/100‑1 (MQ=255)
                                                             ttttttACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGtatat                          <  1:6557238/100‑1 (MQ=255)
                                                             ttttttACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGtatat                          <  1:3952470/100‑1 (MQ=255)
                                                             ttttttACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAAATGGAACAACCATAATTGtatat                          <  1:557385/100‑1 (MQ=255)
                                                             ttttttACTGAAATGACGTAATAATCGTCGTTCAATTAATCTATTAAACTTAGTAAGAAAGCAATCAGTTCGTTTAACTGGAACAACCATAATTGtatat                          <  1:3084129/100‑1 (MQ=255)
                                                             tttttgACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGtatat                          <  1:2164983/100‑1 (MQ=255)
                                                             gtttttACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGtatat                          <  1:5764419/99‑1 (MQ=255)
                                                              tttttACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGtatata                         <  1:2297931/100‑1 (MQ=255)
                                                               ttttACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAg                        <  1:3960819/100‑1 (MQ=255)
                                                                 ttACTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGAc                      <  1:3175386/100‑1 (MQ=255)
                                                                   aCTGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCt                    <  1:72819/100‑1 (MQ=255)
                                                                     tGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTcg                  <  1:1765470/100‑1 (MQ=255)
                                                                     tGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTcg                  <  1:2675120/100‑1 (MQ=255)
                                                                     tGAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTcg                  <  1:73788/100‑1 (MQ=255)
                                                                      gAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTcgt                 <  1:2565739/100‑2 (MQ=255)
                                                                      gAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTcgg                 <  1:4777917/100‑2 (MQ=255)
                                                                      gAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTcgg                 <  1:3483036/100‑2 (MQ=255)
                                                                      gAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTcga                 <  1:2730012/100‑1 (MQ=255)
                                                                      gAAATGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTcga                 <  1:6507314/100‑1 (MQ=255)
                                                                        aaTGACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTcgacg               <  1:2393643/100‑1 (MQ=255)
                                                                           gACGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTcgaggcaa            <  1:5343796/100‑6 (MQ=255)
                                                                            aCGTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTcgacgagca           <  1:1469545/100‑4 (MQ=255)
                                                                              gTAATAATCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTcgacgcggatg         <  1:3704397/100‑7 (MQ=255)
                                                                               taataaTCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTCGACGATTacca        <  1:1403541/100‑1 (MQ=255)
                                                                               taataaTCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTCGACGATTacca        <  1:6347064/100‑1 (MQ=255)
                                                                                aataatCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTCGACGATTaccac       <  1:814509/100‑1 (MQ=255)
                                                                                aataatCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTCGACGATTaccac       <  1:1067289/100‑1 (MQ=255)
                                                                                 ataatCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAGCCATAATTGTATATAGACCTCGACGATTaccacc      <  1:3034214/100‑1 (MQ=255)
                                                                                 ataatCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCCTAATTGTATATAGACCTCGACGATTaccacc      <  1:4482306/100‑1 (MQ=255)
                                                                                 ataatCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTCGACGATTaccagc      <  1:3586302/100‑3 (MQ=255)
                                                                                 ataatCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTCGACGATTaccacg      <  1:2660413/100‑2 (MQ=255)
                                                                                 ataatCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTCGACGATTaccacc      <  1:852026/100‑1 (MQ=255)
                                                                                  taatCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTCGACGATTaccagtt     <  1:6309640/100‑4 (MQ=255)
                                                                                  taatCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTCGACGATTaccacgg     <  1:70493/100‑3 (MQ=255)
                                                                                  taatCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTCGACGATTAccacca     <  1:4695124/100‑1 (MQ=255)
                                                                                  taatCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTCGACGATTAccacca     <  1:3554387/100‑1 (MQ=255)
                                                                                  taatCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTCGACGATTAccacca     <  1:3100208/100‑1 (MQ=255)
                                                                                  taatCGTCTTTCAATTAATCTATTAAACTCAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTCGACGATTAccacca     <  1:4306655/100‑1 (MQ=255)
                                                                                   aatCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTCGACGATTACCACCaa    <  1:5336835/100‑1 (MQ=255)
                                                                                   aatCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTCGACGATTACCACCaa    <  1:488279/100‑1 (MQ=255)
                                                                                   aatCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTCGACGATTACCACCaa    <  1:3846489/100‑1 (MQ=255)
                                                                                   aatCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTCGACGATTACCACCaa    <  1:2290255/100‑1 (MQ=255)
                                                                                    ctCGTCTTTCAATTAGTCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTCGACGATTACCACCaaa   <  1:2789345/99‑1 (MQ=255)
                                                                                    atCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTCGACGATTACCACCaag   <  1:2748281/100‑2 (MQ=255)
                                                                                     tCGTCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTCGACGATTACCACCAAAt  <  1:2470896/100‑1 (MQ=255)
                                                                                        |                                                                                                
CACCACAACCGATACATTTTAAAATGTCAGACAATCAATTTTCCTCCCATGTGATATAACCTTTTTTACTGAAATGACGTAATAATCGCCTTTCAATTAATCTATTAAACTTAGTAATAAAGCCATCAGTTCGTTTAACTGGAACAACCATAATTGTATATAGACCTCGACGATTACCACCAAAT  >  NC_007793/1706115‑1706299

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑