| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 1,693,739 | T→C | T145A (ACA→GCA) | SAUSA300_RS08410 ← | coproporphyrinogen III oxidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 1,693,739 | 0 | T | C | 100.0% | 20.8 / NA | 10 | T145A (ACA→GCA) | SAUSA300_RS08410 | coproporphyrinogen III oxidase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (1/9); total (1/9) | |||||||||||
CCATATCTAAAGCTAGATCTAAACTTTGTTCAAAATCTTCAATCGTCTGTTTCGGTAAATGATACATTAAATCTAAACTGATTGATTTAATACCTGTGTTTTTAGCATTTAACACCGAAGTGTAAATATCTTCAGTATTGTGCGTTCTACCTAAAACAGACAATAACTCCGGCTTGA > NC_007793/1693643‑1693819 | ccATATCTAAAGCTAGATCTAAACTTTGTTCAAAATCTTCAATCGTCTGTTTCGGTAAATGATACATTAAATCTAAACTGATTGATTTAATACCTgcgta < 1:3411607/100‑2 (MQ=255) gatCTCAAGTTAGATCTAAACTTTGTTCAAAATCTTCAATCGTCTGTTTCGGTAAATGATACATTAAATCTAAACTGATTGATTTAATACCTGCGttttt < 1:4567514/99‑1 (MQ=255) cTAAACTTTGTTCAAAATCTTCAATCGTCTGTTTCGGTAAATGATACATTAAATCTAAACTGATTGATTTAATACCTGCGTTTTTAGCATTTAACACCGa < 1:3370136/100‑1 (MQ=255) aaaCTTTGTTCAAAATCTTCAATCGTCTGTTTCGGTAAATGATACATTAAGTCTAAACTGATTGATTTAATACCTGCGTTTTTAGCATTTAACACCGAAg > 1:4145259/1‑100 (MQ=255) cTGTTTCGGTAAATGATACATTAAATCTAAACTGATTGATTTAATACCTGCGTTTTTAGCATTTAACACCGAAGTGTAAATATCTTCAGTATTGTGCGtt < 1:3566820/100‑1 (MQ=255) cTGTTTCGGTAAATGATACATTAAATCTAAACTGATTGATTTAATACCTGCGTTTTTAGCATTTAACACCGAAGTGTAAATATCTTCAGTATTGTGCGtt < 1:6019868/100‑1 (MQ=255) cTGTTTCGGTAAATGATACATTAAATCGAAACTGATTGATTTAATACCGGCGTTTTTAGCATTTAACACCGAAGTGTAAATATCTTCAGTATTGTGCGtt < 1:569278/100‑1 (MQ=255) tGTTTCAGTAAATGATACATTAAATCTAAACTGATTGATTTAATACCTGCGTTTTTAGCATTTAACACCGAAGTGTAAATATCTTCAGTATTGTGCGttt < 1:5301596/100‑2 (MQ=255) gTTTCGGTAAATGATACATTAAATCTAAACTGATTGATTTAATACCTGCGTTTTTAGCATTTAACACCGAAGTGTAAATATCTTCAGTATTGTGCGTTca < 1:911391/100‑2 (MQ=255) aaCTGATTGATTTAATACCTGCGTTTTTAGCATTTAACACCGAAGTGTAAATATCTTCAGTATTGTGCGTTCTACCTAAAACAGACAATAACTCCGGCtt < 1:974384/100‑1 (MQ=255) cTGATTGATTTAATACCTGCGTTTTTAGCATTTAACACCGAAGTGTAAATATCTTCAGTATTGTGCGTTCTACCTAAAACAGACAATAACTCCGGCTTGa < 1:41475/100‑1 (MQ=255) | CCATATCTAAAGCTAGATCTAAACTTTGTTCAAAATCTTCAATCGTCTGTTTCGGTAAATGATACATTAAATCTAAACTGATTGATTTAATACCTGTGTTTTTAGCATTTAACACCGAAGTGTAAATATCTTCAGTATTGTGCGTTCTACCTAAAACAGACAATAACTCCGGCTTGA > NC_007793/1693643‑1693819 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |