D3A :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,644,501	T→C	T159A (ACA→GCA)	SAUSA300_RS08135 ←	elongation factor P

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,644,501	0	T	C	99.9%	2181.9 / NA	760	T159A (ACA→GCA)	SAUSA300_RS08135	elongation factor P
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (1/758); total (1/759)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.32e-01

Only 100 of 763 total aligned reads displayed.

TAACAAATTAGAGATTATCCTCTTGAAATGTAGCTTCCATCACCAGTGTTGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGTATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAGGTTCTGTTTCAGTTACTGTTAATTCAACAGTTTT  >  NC_007793/1644404‑1644597

    aaaTTAGAGATTATCCTCTTGAAATGTAGCTTCCATCACCAGTGTTGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAAcc                                                                                            <  1:5804530/100‑1 (MQ=255)

      aTTAGAGATTATCCTCTTGAAATGTAGCTTCCATCACCAGTGTTGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAg                                                                                          <  1:5322600/100‑1 (MQ=255)

      aTTAGAGATTATCCTCTTGAAATGTAGCTTCCATCACCAGTGTTGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAg                                                                                          <  1:1009616/100‑1 (MQ=255)

        tAGAGATTATCCTCTTGAAATGTAGCTTCCATCACCAGTGTTGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGtc                                                                                        <  1:4033903/100‑2 (MQ=255)

         agagATTATCCTCTTGAAATGTAGCTTCCATCACCAGTGTTGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGttt                                                                                       <  1:5570455/100‑1 (MQ=255)

         agagATTATCCTCTTGAAATGTAGCTTCCATCACCAGTGTTGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGttt                                                                                       <  1:2123942/100‑1 (MQ=255)

           agaTTATCCTCTTGAAATGTAGCTTCCATCACCAGTGTTGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCa                                                                                     <  1:4239696/100‑1 (MQ=255)

             aTTATCCTCTTGAAATGTAGCTTCCATCACCAGTGTTGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAAc                                                                                   <  1:4286385/100‑1 (MQ=255)

                aTCCTCTTGAAATGTAGCTTCCATCACCAGTGTTGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGt                                                                                <  1:3438791/100‑1 (MQ=255)

                     ctTGAAATGTAGCTTCCATCACCAGTGTTGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCg                                                                           <  1:3835594/100‑1 (MQ=255)

                     ctTGAAATGTAGCTTCCATCACCAGTGTTGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCg                                                                           <  1:1826723/100‑1 (MQ=255)

                               tcttccgaTCTCCGGTGTTGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGc                                                                 <  1:1494540/93‑1 (MQ=255)

                                 cTTCCATCACCAGTGTTGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCat                                                               <  1:394386/100‑2 (MQ=255)

                                 cTTCCATCACCAGTGTTGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCAc                                                               <  1:2500370/100‑1 (MQ=255)

                                  ttCCATCACCAGTGTTGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCaag                                                              <  1:4399667/100‑3 (MQ=255)

                                      tctcccAGCGTTGACAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAgag                                                          <  1:4909447/96‑3 (MQ=255)

                                        ttccAGTGTTGATAATTAAAACGTCACCTTCGTTTACAAATAACGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGc                                                        <  1:4194994/98‑1 (MQ=255)

                                        taCCAATGTTGATAATTAAAACGTCTCCTTCGTTTACAAATAAAGGTTCATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGc                                                        <  1:5002348/99‑1 (MQ=255)

                                        ctccAGCGTTGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGc                                                        <  1:5964635/98‑1 (MQ=255)

                                        cACCAGTGTTGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGc                                                        <  1:415051/100‑1 (MQ=255)

                                        cACCAGTGTTGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGc                                                        <  1:2750066/100‑1 (MQ=255)

                                          ctaGTGTTGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAg                                                      >  1:4346940/3‑100 (MQ=255)

                                          ccAGTGTTGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGccg                                                      <  1:1735203/100‑3 (MQ=255)

                                           cAGTGTTGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAgg                                                     <  1:645984/100‑2 (MQ=255)

                                           cAGTGTTGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGt                                                     <  1:1328028/100‑1 (MQ=255)

                                           cAGCGTTGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGt                                                     <  1:6337818/100‑1 (MQ=255)

                                           cAGCGTTGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGt                                                     <  1:2632969/100‑1 (MQ=255)

                                              tgtTGATAATTAAAACGTCACCTTCGTTTACAAATAAAGATACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATc                                                  <  1:3619180/100‑1 (MQ=255)

                                              cgtTGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATc                                                  <  1:1213625/99‑1 (MQ=255)

                                                ttGATAATTAAAACGTCGCCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAGCAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCag                                                <  1:188200/100‑2 (MQ=255)

                                                ttGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCAc                                                <  1:2824208/100‑1 (MQ=255)

                                                 tGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCAcc                                               <  1:5708099/100‑1 (MQ=255)

                                                 tGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCAcc                                               <  1:609785/100‑1 (MQ=255)

                                                   aTAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCtt                                             <  1:705189/100‑1 (MQ=255)

                                                    tAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCttt                                            <  1:5408122/100‑1 (MQ=255)

                                                    tAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCttg                                            <  1:2991974/100‑2 (MQ=255)

                                                     aaTTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTa                                           <  1:5261941/100‑1 (MQ=255)

                                                      aTTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTat                                          <  1:2178310/100‑2 (MQ=255)

                                                       ttAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAAt                                         <  1:1375281/100‑1 (MQ=255)

                                                       ttAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAAt                                         <  1:3978056/100‑1 (MQ=255)

                                                          aaaCGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCGGTATCACCTTTAATAcc                                      <  1:1415704/100‑1 (MQ=255)

                                                          aaaCGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCCCCTTTAATAcc                                      <  1:1162544/100‑1 (MQ=255)

                                                          aaaCGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATAcc                                      <  1:4083319/100‑1 (MQ=255)

                                                          aaaCGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATAcc                                      <  1:5136860/100‑1 (MQ=255)

                                                          aaaCGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATAcc                                      <  1:5621734/100‑1 (MQ=255)

                                                          aaaCGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATAcc                                      <  1:484938/100‑1 (MQ=255)

                                                          aaaCGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATAcc                                      <  1:3398148/100‑1 (MQ=255)

                                                          aaaCGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATAcc                                      <  1:664429/100‑1 (MQ=255)

                                                          aaaCGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATAcc                                      <  1:93419/100‑1 (MQ=255)

                                                          aaaCGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATAcc                                      <  1:73738/100‑1 (MQ=255)

                                                          aaaCGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATAcc                                      <  1:2374211/100‑1 (MQ=255)

                                                          aaaCGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATAcc                                      <  1:2428909/100‑1 (MQ=255)

                                                          aaaCGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATAcc                                      <  1:3893619/100‑1 (MQ=255)

                                                          aaaCGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATAcc                                      <  1:2666461/100‑1 (MQ=255)

                                                          aaaCGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATAcc                                      <  1:6521887/100‑1 (MQ=255)

                                                          aaaCGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATAcc                                      <  1:313124/100‑1 (MQ=255)

                                                          aaaCGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATAcc                                      <  1:6244134/100‑1 (MQ=255)

                                                          aaaCGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATAca                                      <  1:2282151/100‑2 (MQ=255)

                                                          aaaCGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGCTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATAcc                                      <  1:5355824/100‑1 (MQ=255)

                                                          aaaCGTCACCTTCGTTTACAAAGAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATAcc                                      <  1:3356073/100‑1 (MQ=255)

                                                          aaaCGGCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATAcc                                      <  1:1132304/100‑1 (MQ=255)

                                                          aaaCGACACCGTCGTTTACAAATAAAGGTACAGTTAATGCATACCCAGTTTCAACAGTTGCCGAGTTAGTGGCACCAGTTGCAGTATCACCTTTAATAcc                                      <  1:848742/100‑1 (MQ=255)

                                                           aaCGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCa                                     <  1:3264371/100‑1 (MQ=255)

                                                           aaCGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCa                                     <  1:3516159/100‑1 (MQ=255)

                                                            aCGTCTCCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAg                                    <  1:4749990/100‑1 (MQ=255)

                                                            aCGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCTCCAGTTGCAGTATCACCTTTAATACCAg                                    <  1:3480139/100‑1 (MQ=255)

                                                            aCGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCat                                    <  1:886837/100‑2 (MQ=255)

                                                            aCGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAg                                    <  1:6544473/100‑1 (MQ=255)

                                                            aCGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAg                                    <  1:79838/100‑1 (MQ=255)

                                                            aCGTCACCTTCGTTGACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAg                                    <  1:4801720/100‑1 (MQ=255)

                                                            aCGTCACCTGCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGACGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAg                                    <  1:4466903/100‑1 (MQ=255)

                                                             cGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAgg                                   <  1:4112297/100‑1 (MQ=255)

                                                             cGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAgg                                   <  1:5169340/100‑1 (MQ=255)

                                                             cGTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAgg                                   <  1:2084051/100‑1 (MQ=255)

                                                              gTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAGCAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAggg                                  <  1:6293433/100‑2 (MQ=255)

                                                              gTCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAGGt                                  <  1:3034199/100‑1 (MQ=255)

                                                               tCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAggga                                 <  1:5880644/100‑3 (MQ=255)

                                                               tCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAGGtt                                 <  1:1639584/100‑1 (MQ=255)

                                                               tCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAGGtt                                 <  1:2563625/100‑1 (MQ=255)

                                                               tCACCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAGGtt                                 <  1:3546632/100‑1 (MQ=255)

                                                                 aCCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCGGTTTCAACAGTTGCCGATTTAGTGGCGCCAGTTGCAGTATCACCTTTAATACCAGGTTCt                               <  1:1055619/100‑1 (MQ=255)

                                                                 aCCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAGGTTCt                               <  1:5919423/100‑1 (MQ=255)

                                                                 aCCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAGGTTCt                               <  1:1259170/100‑1 (MQ=255)

                                                                 aCCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAGGTTCt                               <  1:458650/100‑1 (MQ=255)

                                                                 aCCTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAGGTTCt                               <  1:2889209/100‑1 (MQ=255)

                                                                  ccTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAGGTTCTg                              <  1:6414389/100‑1 (MQ=255)

                                                                   cTTCGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCGCCAGTTGCAGTATCACCTTTAATACCAGGTTCTGt                             <  1:4265984/100‑1 (MQ=255)

                                                                      cGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAGGTTCTGTTTc                          <  1:6181002/100‑1 (MQ=255)

                                                                      cGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAGGTTCTGTTTc                          <  1:2009818/100‑1 (MQ=255)

                                                                      cGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAGGTTCTGTTTc                          <  1:4620289/100‑1 (MQ=255)

                                                                      cGTTTACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAGGTTCTGTTTc                          <  1:6593136/100‑1 (MQ=255)

                                                                          tACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAGGTTCTGTTTCAggg                      <  1:3761938/100‑3 (MQ=255)

                                                                          tACAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAGGTTCTGTTTCAGtt                      <  1:5053287/100‑1 (MQ=255)

                                                                           aCAAATAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAGGTTCTGTTTCAggct                     <  1:3179959/100‑4 (MQ=255)

                                                                             aaaTAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAGGTTCTGTTTCAGTTACt                   <  1:4700624/100‑1 (MQ=255)

                                                                             aaaTAAAGGTACATTTAATGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAGGTTCTGTTTCAGTTACt                   <  1:5736573/100‑1 (MQ=255)

                                                                                             aaTGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAGGTTCTGTTTCAGTTACTGTTAATTCAACAgcgc   <  1:3689071/100‑4 (MQ=255)

                                                                                              aTGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAGGTTCTGTTTCAGTTACTGTTAATTCAACAGtttt  <  1:3220977/100‑1 (MQ=255)

                                                                                              aTGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAGGTTCTGTTTCAGTTACTGTTAATTCAACAGtttt  <  1:1952493/100‑1 (MQ=255)

                                                                                              aTGCATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAGGTTCTGTTTCAGTTACTGTTAATTCAACAGtttt  <  1:5482698/100‑1 (MQ=255)

TAACAAATTAGAGATTATCCTCTTGAAATGTAGCTTCCATCACCAGTGTTGATAATTAAAACGTCACCTTCGTTTACAAATAAAGGTACATTTAATGTATAACCAGTTTCAACAGTTGCCGATTTAGTGGCACCAGTTGCAGTATCACCTTTAATACCAGGTTCTGTTTCAGTTACTGTTAATTCAACAGTTTT  >  NC_007793/1644404‑1644597

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`