| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 277,058 | C→T | intergenic (‑146/‑223) | SAUSA300_RS01215 ← / → SAUSA300_RS01220 | hypothetical protein/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 277,058 | 0 | C | T | 100.0% | 13.6 / NA | 7 | intergenic (‑146/‑223) | SAUSA300_RS01215/SAUSA300_RS01220 | hypothetical protein/membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (7/0); total (7/0) | |||||||||||
TACAAGAAATATAACATAACGACGTTTAAAATCAATTAGAAATATCTTTTTATTCTGATAATAGACACAGTATAGACACATTTTGACGGTCGATAACAATTGTAATATCAAGGGTTTGTAATGAATTGAATATCATTAAAATACTTATATAAAAATATTGTTCGGAATATAAAAAGTTAAATA > NC_007793/276972‑277154 | tACAAGAAATATAACATAACGACGTTTAAAATCAATTAGAAATATCTTTTTATTCTGCTAATAGGCACAATATAGACACATTTTGATGGTCGATAACAAt > 1:5671851/1‑100 (MQ=255) cctaacataacGACGTTTAACATCAATTAGAAATATCTTTTTCTTCTGATAATAGGCACACTATAGACACATTTTGATGGTCGATAACAATTGTAATATc > 1:5881602/3‑100 (MQ=255) ataGGCACAATATAGACACATTTTGATGGTCGATAACAATTGTAATATCAAGGGTTTGTAATGAATTGAATATCATTAAAATACTTATATAAAAATATTg > 1:4066981/1‑100 (MQ=255) aGACACATTTTGATGGTCGATAACAATTGTAATATCAAGGGTTTGTAATGAATTGAATATCATTAAAATACTTATATAAAAATATTGTTCGGAATATaaa > 1:1091897/1‑100 (MQ=255) gACACATTTTGATGGTCGATAACAATTGTAATATCAAGGGTTTGTAATGAATTGAATATCATTAAAATACTTATATAAAAATATTGTTCGGAATATaaaa > 1:3860776/1‑100 (MQ=255) tGATGGTCGATAACAATTGTAATATCAAGGGTTTGTAATGAATTGAATATCATTAAAATACTTATATAAAAATATTGTTCGGAATATAAAAAGTTAAATa > 1:3787783/1‑100 (MQ=255) tGATGGTCGATAACAATTGTAATATCAAGGGTTTGTAATGAATTGAATATCATTAAAATACTTATATAAAAATATTGTTCGGAATATAAAAAGTTAAATa > 1:720544/1‑100 (MQ=255) | TACAAGAAATATAACATAACGACGTTTAAAATCAATTAGAAATATCTTTTTATTCTGATAATAGACACAGTATAGACACATTTTGACGGTCGATAACAATTGTAATATCAAGGGTTTGTAATGAATTGAATATCATTAAAATACTTATATAAAAATATTGTTCGGAATATAAAAAGTTAAATA > NC_007793/276972‑277154 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |