Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,631,245	A→G	F17F (TTT→TTC)	SAUSA300_RS08060 ←	integrase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,631,245	0	A	G	100.0%	235.6 / NA	89	F17F (TTT→TTC)	SAUSA300_RS08060	integrase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (0/89);  total (0/89)

TTTGCATTTTCAATAGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTCTTCAAATAGAGCAAACTCCTTACCTCTATCCATAGTTATACTTTTGGGTAATAATGGTTTCATAATATTTATAATCTCATTACAAACTACATTGGATTTACGTGTATT  >  NC_007793/1631150‑1631340                                                                                                |                                                                                                tttACATTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAAca                                                                                             <  1:85563/100‑2 (MQ=255)     cATTTTCAATGGAATCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCtt                                                                                         <  1:4798546/100‑1 (MQ=255)     cATTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCtt                                                                                         <  1:6146213/100‑1 (MQ=255)      aTTTTCAATGGAACTACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTa                                                                                        <  1:4937813/100‑1 (MQ=255)       ttttCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTAc                                                                                       <  1:3575429/100‑1 (MQ=255)        tttCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTAcc                                                                                      <  1:3317466/100‑1 (MQ=255)         ttCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTAccc                                                                                     <  1:623127/100‑2 (MQ=255)         ttCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACct                                                                                     <  1:5300910/100‑1 (MQ=255)         ttCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACct                                                                                     <  1:843346/100‑1 (MQ=255)          tCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTAccag                                                                                    <  1:3918626/100‑3 (MQ=255)          tCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACctg                                                                                    <  1:999421/100‑2 (MQ=255)          tCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACctc                                                                                    <  1:1656270/100‑1 (MQ=255)          tCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACctc                                                                                    <  1:5725119/100‑1 (MQ=255)          tCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACcta                                                                                    <  1:4588255/100‑2 (MQ=255)           cAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTAccatg                                                                                   <  1:5361800/100‑4 (MQ=255)           cAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACctct                                                                                   <  1:3880056/100‑1 (MQ=255)           cAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACctct                                                                                   <  1:3658229/100‑1 (MQ=255)           cAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACctct                                                                                   <  1:773519/100‑1 (MQ=255)           cAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACctct                                                                                   <  1:1272068/100‑1 (MQ=255)            aaTGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTAcccaag                                                                                  <  1:5306849/100‑5 (MQ=255)            aaTGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTAccagct                                                                                  <  1:4436747/100‑5 (MQ=255)             atggAACCACGTTGATATGGACAACCCAAATCTCTACAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTag                                                                                 <  1:6062216/97‑2 (MQ=255)             atggAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTAcccgcag                                                                                 <  1:813573/97‑6 (MQ=255)             atggAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTac                                                                                 <  1:1280461/97‑2 (MQ=255)             atggAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTAt                                                                                 <  1:2663916/97‑1 (MQ=255)              tggAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTaag                                                                                <  1:3687912/98‑3 (MQ=255)              tggAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTAtg                                                                                <  1:1362690/98‑2 (MQ=255)               ggAACCACGTTGATATGGACACCCCAAATCCCTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTCCCTCTagaa                                                                               <  1:4696689/99‑4 (MQ=255)               ggAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATcc                                                                               <  1:4487191/99‑1 (MQ=255)               ggAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATcc                                                                               <  1:4313650/99‑1 (MQ=255)               ggAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATcc                                                                               <  1:4495080/99‑1 (MQ=255)               ggAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATcc                                                                               <  1:1192364/99‑1 (MQ=255)               ggAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCCTAccagcacac                                                                               <  1:3156012/99‑8 (MQ=255)                 aaCCACGTTGATATGGACAACCCAAATCGCTAAAATAAATACTACAATTCAATTCATCTTCTATGTGTTCAAATAGAGCGAACTCCTTACCTCTATCCAt                                                                             <  1:3668945/100‑1 (MQ=255)                 aaCCACGTTGATATGGACAACCCAAATCACTAAAATAAGTACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCAt                                                                             <  1:1071928/100‑1 (MQ=255)                 aaCCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATccct                                                                             <  1:1709010/100‑3 (MQ=255)                 aaCCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCag                                                                             <  1:5084744/100‑2 (MQ=255)                 aaCCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCaa                                                                             <  1:5400412/100‑2 (MQ=255)                 aaCCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCAt                                                                             <  1:1176976/100‑1 (MQ=255)                 aaCCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCAt                                                                             <  1:1369859/100‑1 (MQ=255)                 aaCCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCAt                                                                             <  1:6374591/100‑1 (MQ=255)                 aaCCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCAt                                                                             <  1:6368693/100‑1 (MQ=255)                 aaCCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCAt                                                                             <  1:4659130/100‑1 (MQ=255)                 aaCCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCAt                                                                             <  1:4273966/100‑1 (MQ=255)                 aaCCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATGCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCAt                                                                             <  1:6112561/100‑1 (MQ=255)                  aCCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCAtg                                                                            <  1:307105/100‑2 (MQ=255)                  aCCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCAtc                                                                            <  1:5989745/100‑2 (MQ=255)                  aCCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCAtc                                                                            <  1:1640175/100‑2 (MQ=255)                  aCCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCAtc                                                                            <  1:2782363/100‑2 (MQ=255)                  aCCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCAtc                                                                            <  1:2649364/100‑2 (MQ=255)                  aCCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCATa                                                                            <  1:2566684/100‑1 (MQ=255)                   ccACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCTCCTTCTAGTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCAtgt                                                                           <  1:5870505/100‑3 (MQ=255)                   ccACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTGTTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCAtca                                                                           <  1:3600532/100‑3 (MQ=255)                   ccACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTGCCTCTATCCAtgc                                                                           <  1:4550021/100‑3 (MQ=255)                   ccACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCagct                                                                           <  1:2574585/100‑4 (MQ=255)                   ccACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCAtgg                                                                           <  1:4366307/100‑3 (MQ=255)                   ccACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCATAg                                                                           <  1:3275145/100‑1 (MQ=255)                    cACGTTGATATGGGCAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCATAGt                                                                          <  1:2704057/100‑1 (MQ=255)                    cACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCAtgat                                                                          <  1:86642/100‑4 (MQ=255)                    cACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCATAGt                                                                          <  1:2129793/100‑1 (MQ=255)                     aCGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCATAGtt                                                                         <  1:944290/100‑1 (MQ=255)                     aCGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCATAGtt                                                                         <  1:4873377/100‑1 (MQ=255)                     aCGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCATAGtt                                                                         <  1:5888045/100‑1 (MQ=255)                     aCGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCATAGtt                                                                         <  1:6125835/100‑1 (MQ=255)                     aCGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCATAGtt                                                                         <  1:5741061/100‑1 (MQ=255)                     aCGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCATAGtt                                                                         <  1:141615/100‑1 (MQ=255)                       gTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCATCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCAtgggcac                                                                       <  1:3582260/100‑7 (MQ=255)                         tGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTGCCTCTATCCATAGTtatgt                                                                     <  1:4757977/100‑3 (MQ=255)                         tGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCATAGTtagat                                                                     <  1:5272517/100‑4 (MQ=255)                          gATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCATAGTTATGCt                                                                    <  1:5382323/100‑1 (MQ=255)                          gATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCATAGTTATGCt                                                                    <  1:4567181/100‑1 (MQ=255)                           atatGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCATAGTTATGCtt                                                                   <  1:5789476/100‑1 (MQ=255)                           atatGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCATAGTTATGCtt                                                                   <  1:2832346/100‑1 (MQ=255)                           atatGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCATAGTTATGCtt                                                                   <  1:6331595/100‑1 (MQ=255)                            tatGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCATAGTTATGCttt                                                                  <  1:1663822/100‑1 (MQ=255)                            tatGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCATAGTTATGCttg                                                                  <  1:4442829/100‑2 (MQ=255)                             atGGACAACCCAAATCGCTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCATAGTTATGCtttg                                                                 <  1:994071/100‑2 (MQ=255)                                          aTCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCATAGTTATGCTTTTTGGTAATAATGGt                                                    <  1:5810732/100‑1 (MQ=255)                                            cACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTGCCTCTATCCATAGTTATGCTTTTTGGTAATAATGGttt                                                  <  1:6484515/100‑1 (MQ=255)                                                  aataaataCTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCATAGTTATGCTTTTTGGTAATAATGGTTTCataat                                            <  1:2311478/100‑1 (MQ=255)                                                                    attcaTCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCATAGTTATGCTTTTTGGTAATAATGGTTTCATAATATTTATAATCTCATTACa                          <  1:6299408/100‑1 (MQ=255)                                                                    attcaGCTTCTATTTGTGCAAATAGAGCGAACTCCTTTCCGCTACCCATATTTATGCTTTGTGGTAAGAATGGTTTCATAATATTTATAATCTCATTACa                          <  1:3063454/100‑1 (MQ=255)                                                                        aTCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTTTATCCATAGTTATGCTTTTTGGTAATAATGGTTTCATAATATTTATAATCTCATTACAAACt                      <  1:363823/100‑1 (MQ=255)                                                                            tctATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCATAGTTATGCTTTTTGGTAATAATGGTTTCATAATATTTATAATCTCATTACAAACTACag                  <  1:3705594/100‑2 (MQ=255)                                                                             ctATTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCATAGTTATGCTTTTTGGTAATAATGGTTTCATAATATTTATAATCTCATTACAAACTACAtt                 <  1:5732396/100‑1 (MQ=255)                                                                               aTTTGTTCAAATAGAGCGAACTCCTTACCTCTATCCATAGTTATGCTTTTTGGTAATAATGGTTTCATAATATTTATAATCTCATTACAAACTACATTgg               <  1:3757010/100‑1 (MQ=255)                                                                                         aTAGAGCGAACTCCTTACCTCTATCCATAGTTATGCTTTTTGGTAATAATGGTTTCATAATATTTATAATCTCATTACAAACTACATTGGATTTACgtgt     <  1:3023433/100‑1 (MQ=255)                                                                                         aTAGAGCGAACTCCCTACCTCTATCCATAGTTATGCTTTTTGGTAATAATGGTTTCATAATATTTATAATCTCATTACAAACTACATTGGATTTACgtgg     <  1:4991132/100‑2 (MQ=255)                                                                                            gagCGAACTCCTTACCTCTATCCATAGTTATGCTTTTTGGTAATAATGGTTTCATAATATTTATAATCTCATTACAAACTACATTGGATTTACGTGTAtt  <  1:6476554/100‑1 (MQ=255)                                                                                                |                                                                                                TTTGCATTTTCAATAGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTCTTCAAATAGAGCAAACTCCTTACCTCTATCCATAGTTATACTTTTGGGTAATAATGGTTTCATAATATTTATAATCTCATTACAAACTACATTGGATTTACGTGTATT  >  NC_007793/1631150‑1631340

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑