| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 1,630,832 | C→T | intergenic (‑245/+110) | SAUSA300_RS08055 ← / ← SAUSA300_RS08060 | acetyl‑CoA carboxylase biotin carboxyl carrier protein subunit/integrase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 1,630,832 | 0 | C | T | 100.0% | 36.9 / NA | 16 | intergenic (‑245/+110) | SAUSA300_RS08055/SAUSA300_RS08060 | acetyl‑CoA carboxylase biotin carboxyl carrier protein subunit/integrase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (0/16); total (0/16) | |||||||||||
AGAAAAATGAGAATTTCTTAATTTTTTTTAATAAATATTACTAAAAGAGTACAGAAGAAGAAAAAGAAGCATTTTACTAGTAATATCTGTCAAAAACCACAGATTTAAATAGTATGCTTCTTTTTAGATTATGCATTTTACATACAAAATTTATTCGTCCTGTCCTTCCGCGCTCATTGTAAACCATTCGCTT > NC_007793/1630736‑1630928 | aGAAAAATGAGAATTTCTTAAATTTTTTTAATAAATATTACTAAAAGAGTACAGAAGAAGAAAAAGAAGCATTTTACTAGTAATATCTGTCAAAAATcac < 1:241463/100‑1 (MQ=255)aGAAAAATGAGAATTTCTTAAATTTTTTTAATAAATATTACTAAAAGAGTACAGAAGAAGAAAAAGAAGCATTTTACTAGTAATATCTGTCAAAAATcac < 1:3097402/100‑1 (MQ=255) aCTAAAAGAGTACAGAAGAAGAAAAAGAAGCATTTTACTAGTAATATCTGTCAAAAATCACAGATTTAAATAGTATGCTTCTTTTTAGATTATGCAtttg < 1:905399/100‑2 (MQ=255) aagaagCATTTTACTAGTAATATCTGTCAAAAATCACAGATTTAAATAGTATGCTTCTTTTTAGATTATGCATTTTATATACAAAATTTATTCgtcctgt < 1:5448907/100‑1 (MQ=255) agaagCAATTTACTAGTAATATCTGTCAAAAATCACAGATTTAAATAGTATGCTTCTTGTTAGATTAAGCAATTTAGATACAAAATTTATTCgtcctgag < 1:2302210/100‑3 (MQ=255) aagCATTTTCCTAGTAATATCTGTCAAAAATCACAGATTTAAATAGTATGCTTCTTTTTAGATTATGCATTTTATATACAAAATTTATTCgtcctgtcca < 1:5072619/100‑2 (MQ=255) agCATTTTACTAGTAATATCTGTCAAAAATCACAGATTTAAATAGTATGCTTCTTTTTAGATTATGCATTTTATATACAAAATTTATTCgtcctgtcctg < 1:2944321/100‑2 (MQ=255) agCATTTTACTAGTAATATCTGTCAAAAATCACAGATTTAAATAGTATGCTTCTTTTTAGATTATGCATTTTATATACAAAATTTATTCGTCCTGTCCtt < 1:4106653/100‑1 (MQ=255) agCATTTTACTAGTAATATCTGTCAAAAATCACAGATTTAAATAGTATGCTTCTTTTTAGATTATGCATTTTATATACAAAATTTATTCGTCCTGTCCtt < 1:6603651/100‑1 (MQ=255) aCTAGTAATATCTGTCAAAAATCACAGATTTAAATAGTATGCTTCTTTTTAGATTATGCATTTTATATACAAAATTTATTCGTCCTGTCCTTCCGCGCTc < 1:1401006/100‑1 (MQ=255) gTAATATCTGTCAAAAATCACAGATTTAAATAGTATGCTTCTTTTTAGATTATGCATTTTATATACAAAATTTATTCGTCCTGTCCTTCCGCGCTCATTg < 1:514123/100‑1 (MQ=255) tAATATCTGTCAAAAATCACAGATTTAAATAGTATGCTTCTTTTTAGATTATGCATTTTATATACAAAATTTATTCGTCCTGTCCTTCCGCGCTCATTGt < 1:5441885/100‑1 (MQ=255) aaTATCTGTCAAAAATCACAGATTTAAATAGTATGCTTCTTTTTAGATTATGCATTTTATATACAAAATTTATTCGTCCTGTCCTTCCGCGCTCATTGTa < 1:4323631/100‑1 (MQ=255) atatCTGTCAAAAATCACAGATTTAAATAGTATGCTTCTTTTTAGATTATGCATTTTATATACAAAATTTATTCGTCCTGTCCTTCCGCGCTCATTgcct < 1:4205105/100‑4 (MQ=255) atatCTGTCAAAAATCACAGATTTAAATAGTATGCTTCTTTTTAGATTATGCATTTTATATACAAAATTTATTCGTCCTGTCCTTCCGCGCTCATTGTaa < 1:6653061/100‑1 (MQ=255) aaaTCACAGATTTAAATAGTATGCTTCTTTTTAGATTATGCATTTTATATACAAAATTTATTCGTCCTGTCCTTCCGCGCTCATTGTAAACCATTCGCtt < 1:1358662/100‑1 (MQ=255) | AGAAAAATGAGAATTTCTTAATTTTTTTTAATAAATATTACTAAAAGAGTACAGAAGAAGAAAAAGAAGCATTTTACTAGTAATATCTGTCAAAAACCACAGATTTAAATAGTATGCTTCTTTTTAGATTATGCATTTTACATACAAAATTTATTCGTCCTGTCCTTCCGCGCTCATTGTAAACCATTCGCTT > NC_007793/1630736‑1630928 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |