| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 275,084 | G→A | P81S (CCA→TCA) | SAUSA300_RS01210 ← | long‑chain‑fatty‑acid‑‑CoA ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 275,084 | 0 | G | A | 100.0% | 10.3 / NA | 6 | P81S (CCA→TCA) | SAUSA300_RS01210 | long‑chain‑fatty‑acid‑‑CoA ligase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (3/3); total (3/3) | |||||||||||
TCAGCATAGAAGAGCAGTTTTAATTGTGCATCTTCCACAATGGCTGCAATTTCTTTTGGGTTAAGCCGCCAATTCAATGGTAAAAAAACCGCACCTGTTTTAAAACAAGCAAACAATAAATCTAATATTGCAATATCATTTGGCG > NC_007793/275005‑275149 | tCAGCATAGAAGAGCAGTTTTAATTGTGCATCTTCCACAATGGCTGCAATTTCTTTTGGGTTAAGCCGCCAATTCAATGATAAAAAAACCGCACCTGttt > 1:704232/1‑100 (MQ=255) cAGCATAGAAGAGCAGTTTTAATTGTGCATCTTCCACAATGGCTGCAATTTCTTTTGGGTTAAGCCGCCAATTCAATGATAAAAAAACCGCACCTGtttt > 1:783446/1‑100 (MQ=255) aGTTTTAATTGTGCATCTTCCACAATGGCTGCAATTTCTTTTGGGTTAAGCCGCCAATTCAATGATAAAAAAACCGCACCTGTTTTAAAACAAGCAAACa < 1:2520839/100‑1 (MQ=255) tccgatctaggCTGCAATTTCTTTTGGGTTAAGCCGCCAATTCAATGATAAAAAAACCGCACCTGTTTTAAAACAAGCAAACAATAAATCTAATATTGCa < 1:1355095/91‑1 (MQ=255) taaTGGCTGCAATTTCTTTTGGGTTAAGCCGCCAATTCAATGATAAAAAAACCGCACCTGTTTTAAAACAAGCAAACAATAAATCTAATATTGCAATATc < 1:400961/99‑1 (MQ=255) gCAATTTCTTTTGGGTTAAGCCGCCAATTCAATGATAAAAAAACCGCACCTGTTTTAAAACAAGCAAACAATAAATCTAATATTGCAATATCATTTGgcg > 1:4912414/1‑100 (MQ=255) | TCAGCATAGAAGAGCAGTTTTAATTGTGCATCTTCCACAATGGCTGCAATTTCTTTTGGGTTAAGCCGCCAATTCAATGGTAAAAAAACCGCACCTGTTTTAAAACAAGCAAACAATAAATCTAATATTGCAATATCATTTGGCG > NC_007793/275005‑275149 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |