Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,622,675	C→T	V34V (GTG→GTA)	SAUSA300_RS08010 ←	dihydrolipoamide dehydrogenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,622,675	0	C	T	100.0%	247.6 / NA	90	V34V (GTG→GTA)	SAUSA300_RS08010	dihydrolipoamide dehydrogenase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (1/89);  total (1/89)

TACTGTTTGAAATACTTCAGCAGATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCCACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCTCCACCGAGAACGACTAAATCATATTGTTT  >  NC_007793/1622585‑1622767                                                                                           |                                                                                             tACTGTTTGAAATACTTCAGCAGATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACATGGACCTCCTAATAGTTGTCGTTCTACTATTGcc                                                                                     >  1:405010/1‑100 (MQ=255) tACTGTTTGAAATACTTCAGCAGATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTGCCTCCTAATAGTTGTCGTTCTACTATTGcc                                                                                     <  1:621380/100‑1 (MQ=255) tACTGTTTGAAATACTTCAGCAGATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACtcaggct                                                                                     <  1:5239752/100‑7 (MQ=255) tACTGTTTGAAATACTTCAGCAGATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGcc                                                                                     <  1:5346743/100‑1 (MQ=255) tACTGTTTGAAATACTTCAGCAGATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGcc                                                                                     <  1:768989/100‑1 (MQ=255)  aCTGTTTGAAATACTTCAGCAGATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCa                                                                                    <  1:6530801/100‑1 (MQ=255)  aCTGTTTGAAATACTTCAGCAGATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATAGAGACAAGTCCCTCCTAATAGTTGTCGTTCTACTATTGCCa                                                                                    <  1:1554812/100‑1 (MQ=255)   cTGTTTGAAATACTTCAGCAGATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCAc                                                                                   <  1:2337104/100‑1 (MQ=255)    tGTTTGAAATACTTCAGCAGATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTAtaagtttg                                                                                  <  1:3678594/100‑8 (MQ=255)    tGTTTGAAATACTTCAGCAGATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACt                                                                                  <  1:6477636/100‑1 (MQ=255)    tGTTTGAAATACTTCAGCAGATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACt                                                                                  <  1:169799/100‑1 (MQ=255)     gTTTGAAATACTTCAGCAGATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCAcag                                                                                 <  1:1288865/100‑3 (MQ=255)     gTTTGAAATACTTCAGCAGATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCAcag                                                                                 <  1:5061932/100‑3 (MQ=255)             tACTTCAGCAGATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCt                                                                         <  1:1205345/100‑1 (MQ=255)             tACTTCAGCAGATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTCGTCGTTCTACTATTGCCACTTTTTTACCt                                                                         <  1:1165217/100‑1 (MQ=255)              aCTTCAGCAGATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTCATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTa                                                                        <  1:4820902/100‑1 (MQ=255)              aCTTCAGCAGATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCtt                                                                        <  1:5258080/100‑2 (MQ=255)              aCTTCAGCAGATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTa                                                                        <  1:6559473/100‑1 (MQ=255)               cTTCAGCAGATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTaa                                                                       <  1:1072866/100‑1 (MQ=255)                ttCAGCAGATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTagg                                                                      <  1:3256877/100‑3 (MQ=255)                  cagcagATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTTCCTAATTg                                                                    <  1:773450/100‑1 (MQ=255)                  cagcagATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTAccgcagat                                                                    <  1:422619/100‑7 (MQ=255)                  cagcagATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTg                                                                    <  1:5345582/100‑1 (MQ=255)                  cagcagATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTg                                                                    <  1:5392152/100‑1 (MQ=255)                  cagcagATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTg                                                                    <  1:5484000/100‑1 (MQ=255)                  cagcagATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTg                                                                    <  1:6143907/100‑1 (MQ=255)                  cagcagATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTg                                                                    <  1:6191913/100‑1 (MQ=255)                  cagcagATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTg                                                                    <  1:4996403/100‑1 (MQ=255)                  cagcagATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTg                                                                    <  1:6443967/100‑1 (MQ=255)                  cagcagATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTg                                                                    <  1:72286/100‑1 (MQ=255)                  cagcagATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTg                                                                    <  1:466062/100‑1 (MQ=255)                  cagcagATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTg                                                                    <  1:2312621/100‑1 (MQ=255)                  cagcagATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAATTGTCGTTCTACTATTGCCACTTTTTTACCTAATTg                                                                    <  1:6087593/100‑1 (MQ=255)                    gcagATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTgag                                                                  <  1:892305/100‑1 (MQ=255)                    gcagATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTgag                                                                  <  1:761929/100‑1 (MQ=255)                           tAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACg                                                           <  1:5051807/100‑1 (MQ=255)                                   gATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCgcag                                                   <  1:5205784/100‑1 (MQ=255)                                    aTTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCgcagc                                                  <  1:3691755/100‑1 (MQ=255)                                      ttAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCgcagcag                                                <  1:2028001/100‑2 (MQ=255)                                      ttAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCaa                                                <  1:6430691/100‑1 (MQ=255)                                      ttAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGCTCTACCATTGCCACTTTTTTACCTAATTGAGACGCACGTATCgcagcag                                                <  1:398371/100‑2 (MQ=255)                                       tagtagGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAAc                                               <  1:3581793/100‑1 (MQ=255)                                         gtagGAATACAACCTTTATGGAGACAAGTTCCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACat                                             <  1:4548545/100‑1 (MQ=255)                                         gtagGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACat                                             <  1:2415495/100‑1 (MQ=255)                                         gtagGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACat                                             <  1:380539/100‑1 (MQ=255)                                               aTACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATccct                                       <  1:3189464/100‑3 (MQ=255)                                               aTACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTg                                       <  1:1642309/100‑1 (MQ=255)                                                tACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTGCCTAATTGAGACGCACGTATCGCAGCAACATATCCTGc                                      <  1:5754952/100‑1 (MQ=255)                                                tACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGc                                      <  1:3225797/100‑1 (MQ=255)                                                tACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGc                                      <  1:2997927/100‑1 (MQ=255)                                                tACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGc                                      <  1:3736451/100‑1 (MQ=255)                                                tACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGc                                      <  1:4433507/100‑1 (MQ=255)                                                 aCAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTGCCTAATTGAGACGCACGTATTGCAGCAACATATCCTGCa                                     <  1:5135580/100‑1 (MQ=255)                                                  cAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCat                                    <  1:2327403/100‑2 (MQ=255)                                                  cAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAg                                    <  1:6297212/100‑1 (MQ=255)                                                   aaCCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGt                                   <  1:123637/100‑1 (MQ=255)                                                   aaCCTTTATGGAGACAAGTACCTCCTAATAGTTGGCGTTCTACTATTGCCACTGTTTTACCTAAATAAGACGCGCGTATCGCAGCAACATATCCTGCAGt                                   <  1:5460832/100‑1 (MQ=255)                                                    aCCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTGTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTa                                  <  1:1266175/100‑1 (MQ=255)                                                    aCCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGtg                                  <  1:2182551/100‑2 (MQ=255)                                                    aCCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTa                                  <  1:3980994/100‑1 (MQ=255)                                                      cTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTAcc                                <  1:5631996/100‑1 (MQ=255)                                                       tttATGGAGACAAGTTCCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCt                               <  1:196475/100‑1 (MQ=255)                                                       tttATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCt                               <  1:1019575/100‑1 (MQ=255)                                                       tttATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCt                               <  1:2064370/100‑1 (MQ=255)                                                       tttATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCt                               <  1:4489720/100‑1 (MQ=255)                                                        ttATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCTc                              <  1:2323671/100‑1 (MQ=255)                                                        ttATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCTc                              <  1:2030057/100‑1 (MQ=255)                                                         tATGGAGACAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCTcc                             <  1:908900/100‑1 (MQ=255)                                                             ttccgatctACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCTCCACCg                         <  1:1269430/92‑1 (MQ=255)                                                             gagaCAAGTACCTCTTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCTCCAcca                         <  1:4794096/100‑2 (MQ=255)                                                             gagaCAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCTCCACCg                         <  1:439112/100‑1 (MQ=255)                                                             gagaCAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCTCCACCg                         <  1:1296645/100‑1 (MQ=255)                                                             gagaCAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCTCCACCg                         <  1:1274651/100‑1 (MQ=255)                                                             gagaCAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCTCCACCg                         <  1:926523/100‑1 (MQ=255)                                                             gagaCAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCTCCACCg                         <  1:6264160/100‑1 (MQ=255)                                                             gagaCAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCTCCACCg                         <  1:5932443/100‑1 (MQ=255)                                                             gagaCAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCTCCACCg                         <  1:5658237/100‑1 (MQ=255)                                                             gagaCAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCTCCACCg                         <  1:484108/100‑1 (MQ=255)                                                             gagaCAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCTCCACCg                         <  1:2631378/100‑1 (MQ=255)                                                             gagaCAAGTACCTCCTAATAGTTGTCGTTCTACTATCGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCTCCACCg                         <  1:2588527/100‑1 (MQ=255)                                                             gagaCAAGTACCTCCTAATAGTTGTCGTTCTACCATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCTCCACCg                         <  1:5358208/100‑1 (MQ=255)                                                             cttccgatctcctcctAATAGTTGTCGTTCTGCTATTGCTACTTTTTTTCCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCTCCACCg                         <  1:810010/90‑1 (MQ=255)                                                              agaCAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCTCCACCgc                        <  1:4619179/100‑2 (MQ=255)                                                               gaCAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCTCCACCgag                       <  1:1585827/100‑1 (MQ=255)                                                                aCAAGTACCTCCTAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCTCCACCggca                      <  1:6596347/100‑4 (MQ=255)                                                                         tcctAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCTCCACCGAGAACGACTaaa             <  1:5077247/100‑1 (MQ=255)                                                                         tcctAATAGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCTCCACCGAGAACGACTaaa             <  1:5023523/100‑1 (MQ=255)                                                                                aGTTGTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCTCCACCGAGAACGACTAAATCATAtt      <  1:2844640/100‑1 (MQ=255)                                                                                   tGTCGTTCTACTATTGCCAC‑TTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCTCCACCGAGAACGACTAAATCATATTGttt  <  1:6619653/100‑1 (MQ=255)                                                                                    gTCGTTCTACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCTCCACCGAGAACGACTAAATCATATTGttg  <  1:493825/100‑2 (MQ=255)                                                                                           |                                                                                             TACTGTTTGAAATACTTCAGCAGATTTAAGCAGCGATTTAGTAGGAATACAACCTTTATGGAGACAAGTACCTCCTAATAGTTGTCGTTCCACTATTGCCACTTTTTTACCTAATTGAGACGCACGTATCGCAGCAACATATCCTGCAGTACCTCCACCGAGAACGACTAAATCATATTGTTT  >  NC_007793/1622585‑1622767

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑