| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 271,976 | G→C | A112G (GCT→GGT) | SAUSA300_RS01200 ← | 3‑hydroxyacyl‑CoA dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 271,976 | 0 | G | C | 100.0% | 10.7 / NA | 6 | A112G (GCT→GGT) | SAUSA300_RS01200 | 3‑hydroxyacyl‑CoA dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (2/4); total (2/4) | |||||||||||
GAAATGTAGACCAAAGAATCGTTCTTGATCCTTCTCGTTAAATGCTTGAGCAATCGCATTAATTGGAATACCTGATGTATTTGTAGCGAATAAAGCATCTTCTTTAGCATGTTGTAGAACTTGTTGCCAAACAGCATGCTTAATTTCAATATCTTCTTTGACTGCTTCGATATATAAATCAGCATCATCAT > NC_007793/271882‑272072 | gAAATGTAGACCAAAGAATCGTTCTTGATCCTTCTCGTTAAATGCTTGAGCAATCGCATTAATTGGAATACCTGATGTATTTGTAGCGAATAAACCAtct < 1:6159683/100‑1 (MQ=255) gAATCGTTCTTGATCCTTCTCGTTAAATGCTTGAGCAATCGCATTAATTGGAATACCTGATGTATTTGTAGCGAATAAACCATCTTCTTTAGCAtgttgt < 1:319730/100‑1 (MQ=255) ctttCTAGTTAAATGCTTGAGCAATCGCATTAATTGGAATACCTGATGTATTTGTAGCGAATAAACCATCTTCTTTAGCATGTTGTAGAACTTGTTGCCa < 1:2063881/98‑1 (MQ=255) ctcGTTAAATGCTTGAGCAATCGCATTAATTGGAATACCTGATGTATTTGTAGCGAATAAACCATCTTCTTTAGCATGTTGTAGAACTTGTTGCCAAACa > 1:5927299/1‑100 (MQ=255) aTACCTGATGTATTTGTAGCGAATAAACCATCTTCTTTAGCATGTTGTAGAACTTGTTGCCAAACAGCATGCTTAATTTCAATATCTTCTTTGACTGCtt < 1:6589766/100‑1 (MQ=255) aaaCCATCTTCTTTAGCATGTTGTAGAACTTGTTGCCAAACAGCATGCTTAATTTCAATATCTTCTTTGACTGCTTCGATATATAAATCAGcatcatcat > 1:2230678/1‑100 (MQ=255) | GAAATGTAGACCAAAGAATCGTTCTTGATCCTTCTCGTTAAATGCTTGAGCAATCGCATTAATTGGAATACCTGATGTATTTGTAGCGAATAAAGCATCTTCTTTAGCATGTTGTAGAACTTGTTGCCAAACAGCATGCTTAATTTCAATATCTTCTTTGACTGCTTCGATATATAAATCAGCATCATCAT > NC_007793/271882‑272072 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |