| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 270,510 | T→C | T601A (ACT→GCT) | SAUSA300_RS01200 ← | 3‑hydroxyacyl‑CoA dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 270,510 | 0 | T | C | 100.0% | 12.6 / NA | 7 | T601A (ACT→GCT) | SAUSA300_RS01200 | 3‑hydroxyacyl‑CoA dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (2/5); total (2/5) | |||||||||||
CACGTAAATAACCATAACGACGTGCCTCAAAGGCATTTGTAGAGACTTTCGCAAATGCGATATTCGTCAGTACTTTTGTCATGGAAGTTTGTTTGTCATCAAACTTATGCGATGTGCGTAATATGCGATCAGCCATTTCTGCAAGGCCACCGCCACTCGGTAATAAGCCAACACCTGCTTCA > NC_007793/270423‑270604 | cACGTAAATAACCATAACGACGTGCCTCAAAGGCATTTGTAGAGACTTTCGCAAATGCGATATTCGTCAGTACTTTTGTCATGGAAGCTTGTTTGtcatc > 1:996113/1‑100 (MQ=255) aGGCATTTGTAGAGACTTTCGCAAATGCGATATTCGTCAGTACTTTTGTCATGGAAGCTTGTTTGTCATCAAACTTATGCGATGTGCGTAATATGCGATc < 1:1043445/100‑1 (MQ=255) tAGAGACTTTCGCAAATGCGATATTCGTCAGTACTTTTGTCATGGAAGCTTGTTTGTCATCAAACTTATGCGATGTGCGTAATATGCGATCAGCCAttgc < 1:3353711/100‑3 (MQ=255) gaCTTTCGCAAATGCGATATTCGTCAGTACTTTTGTCATGGAAGCTTGTTTGTCATCAAACTTATGCGATGTGCGTAATATGCGATCAGCCATTTCTGCa < 1:4408093/100‑1 (MQ=255) gaCTTTCGCAAATGCGATATTCGTCAGTACTTTTGTCATGGAAGCTTGTTTGTCATCAAACTTACGCGATGTGCGTAATATGCGATCAGCCATTTCTGCa < 1:6006983/100‑1 (MQ=255) gCGATATTCGTCAGTACTTTTGTCATGGAAGCTTGTTTGTCATCAAACTTATGCGATGTGCGTAATATGCGATCAGCCATTTCTGCAAGGCCACCGCCag > 1:1029007/1‑99 (MQ=255) ggAAGCTTGTTTGTCATAAAATTTATGCGATGTGCGTAAGATGCGATCACCCATTTCTGAAAGGCCACCGCCACTCGGTAATAAGCCAACACCTGCtagg < 1:5352943/100‑4 (MQ=255) | CACGTAAATAACCATAACGACGTGCCTCAAAGGCATTTGTAGAGACTTTCGCAAATGCGATATTCGTCAGTACTTTTGTCATGGAAGTTTGTTTGTCATCAAACTTATGCGATGTGCGTAATATGCGATCAGCCATTTCTGCAAGGCCACCGCCACTCGGTAATAAGCCAACACCTGCTTCA > NC_007793/270423‑270604 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |