| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 1,590,116 | T→C | E164E (GAA→GAG) | SAUSA300_RS07850 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 1,590,116 | 0 | T | C | 100.0% | 38.4 / NA | 16 | E164E (GAA→GAG) | SAUSA300_RS07850 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (9/7); total (9/7) | |||||||||||
TTTAATTTGTTGTTTAAGGTCTACAAGCGTATGTTTAATATACAATTCATCGTTTGACGGTAAATCAGATACTTTGAAATCTTGTCGCTCAACTTCTAGTAAATCGAAATCGCTACCAGCTGAATTATAGGTTTTAAGTTCACCCTCTTCAATGATTCTGTTTTCAAAGTCTTTTATAACTATAAATAC > NC_007793/1590023‑1590211 | tttaatttGTTGTTTAAGGTCTACAAGTGTATGTTTAATATACAATTCATCGTTTGACGGTAAATCAGATTCTTTGAAATCTTGTCGCTCAACCTCTAGt < 1:5239522/100‑1 (MQ=255)tttaatttGTTGTTTAAGGTCTACAAGTGTATGTTTAATATACAATTCATCGTTTGACGGTAAATCAGATACTTTGAAATCTTGTCGCTCAACCTCTAGt < 1:957058/100‑1 (MQ=255) ttgttgTTTAAGGTCTACAAGTGTATGTTTAATATACAATTCATCGTTTGACGGTAAATCAGATACTTTGAAATCTTGTCGCTCAACCTCTAGTaaatcg > 1:2567347/1‑100 (MQ=255) ctAAGGTCTACAAGTGTATGTTTAATATACAATTCATCGTTTGACGGTAAATCAGATACTTTGAAATCTTGTCGCTCAACCTCTAGTAAATCGAAATCGc > 1:4498920/2‑100 (MQ=255) accaGGTCTACAAGTGTATGTTTAATATACAATTCATCGTTTGACGGTAAATCAGATACTTTGAAATCTTGTCGCTCAACCCCTAGGagatcggaagagc > 1:2048078/4‑96 (MQ=255) tAAGGTCTACAAGTGTATGTTTAATATACAATTCATCGTTTGACGGTAAATCAGATACTTTGAAATCTTGTCGCTCAACCTCTAGTAAATCGAAATCGCt > 1:2284352/1‑100 (MQ=255) tAAGGTCTACAAGTGTATGTTTAATATACAATTCATCGTTTGACGGTAAATCAGATACTTTGAAATCTTGTCGCTCAACCTCTAGTAAATCGAAATCGCt > 1:3510625/1‑100 (MQ=255) ggTCTACAAGTGTATGTTTAATATACAATTCATCGTTTGACGGTAAATCAGATACTTTGAAATCTTGTCGCTCAACCTCTAGTAAATCGAAATCGCTAcc < 1:5344864/100‑1 (MQ=255) aCAAGTGTATGTTTAATATACAATTCATCGTTTGACGGTAAATCAGATACTTTGAAATCTTGTCGCTCAACCTCTAGTAAATCGAAATCGCTACCAGCTg < 1:1529613/100‑1 (MQ=255) aCAAGTGTATGTTTAATATACAATTCATCGTTTGACGGTAAATCAGATACTTTGAAATCTTGTCGCTCAACCTCTAGTAAATCGAAATCGCTACCAGCTg > 1:2107007/1‑100 (MQ=255) aCAAGTGTATGTTTAATATACAATTCATCGTTTGACGGTAAATCAGATACTTTGAAATCTTGTCGCTCAACCTCTAGTAAATCGAAATCGCTACCAGCTg < 1:5037247/100‑1 (MQ=255) aCAAGTGTATGTTTAATATACAATTCATCGTTTGACGGTAAATCAGATACTTTGAAATCTTGTCGCTCAACCTCTAGTAAATCGAAATCGCCACCAgatc > 1:3622139/1‑97 (MQ=255) aaTATACAATTCATCGTTTGACGGTAAATCAGATACTTTGAAATCTTGTCGCTCAACCTCTAGTAAATCGAAATCGCTACCAGCTGAATTATAGGTTTTa < 1:4501403/100‑1 (MQ=255) cATCGTTTGACGGTAAATCAGATACTTTGAAATCTTGTCGCTCAACCTCTAGTAAATCGAAATCGCTACCAGCTGAATTATAGGTTTTAAGTTCACCctc > 1:1032502/1‑100 (MQ=255) tGACGGTAAATCAGATACTTTGAAATCTTGTCGCTCAACCTCTAGTAAATCGAAATCGCTACCAGCTGAATTATAGGTTTTAAGTTCACCCTCTTCAATg < 1:4987374/100‑1 (MQ=255) cAACCTCTAGTAAATCGAAATCGCTACCAGCTGAATTATAGGTTTTAAGTTCAGCCTCTTCAATGATTCTGTTTTCAAAGTCTTTAATAACTATAAATAc > 1:1618829/1‑100 (MQ=255) | TTTAATTTGTTGTTTAAGGTCTACAAGCGTATGTTTAATATACAATTCATCGTTTGACGGTAAATCAGATACTTTGAAATCTTGTCGCTCAACTTCTAGTAAATCGAAATCGCTACCAGCTGAATTATAGGTTTTAAGTTCACCCTCTTCAATGATTCTGTTTTCAAAGTCTTTTATAACTATAAATAC > NC_007793/1590023‑1590211 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |