Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,580,674	A→G	Y42Y (TAT→TAC)	SAUSA300_RS07750 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,580,674	0	A	G	100.0%	34.3 / NA	16	Y42Y (TAT→TAC)	SAUSA300_RS07750	hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (1/15);  total (1/15)

TGCTAAATCCTCATGACCATTCTTTAACGGTGCTCTAGACAAGTATTTGATTGCATTACCTATTGCGAATGCTAATTGTGGTGGATACTGTGCCGTAACTTGTTCGATGAAATCTATAATTTCAATGTCGCCGTATGTGTAATGCGCAGGTTGTTTAACATTGTCTTGTGTTTCATTC  >  NC_007793/1580590‑1580767                                                                                     |                                                                                              cgccataTCCTCATGACCATTCTTTAACGGTGCTCTAGACAAGTATTTAATTGCATTACCTATTGCGAATGCTAATTGTGGTGGGTACTGTGCCGTAACt                                                                                <  1:2577533/94‑1 (MQ=255)           tCATGACCATTCTTTAACGGTGCTCTAGACAAGTATTTAATTGCATTACCTATTGCGAATGCTAATTGTGGTGGGTACTGTGCCGTAACTTGTTCAAtaa                                                                      >  1:6005339/1‑98 (MQ=255)                         tAACGGTGCTCTAGACAAGTATTTAATTGCATTACCTATTGCGAATGCTAATTGTGGTGGGTACTGTGCCGTAACTTGTTCAATAAAATCTATAATTTCa                                                        <  1:3991288/100‑1 (MQ=255)                                      gACAAGTATTTAATTGCATTACCTATTGCGAATGCTAATTGTGGTGGGTACTGTGCCGTAACTTGTTCAATAAAATCTATAATTTCAATGTCGCCGTAtg                                           <  1:25278/100‑1 (MQ=255)                                       ctaggTATTTAATTGCATTACCTATTGCGAATGCTAATTGTGGTGGGTACTGTGCCGTAACTTGTTCAATAAAAACTATAATTTCAATGTCGCCGTAtgt                                          <  1:4392507/96‑1 (MQ=255)                                        cAAGTATTTAATTGCATTACCTATTGCGAATGCTAATTGTGGTGGGTACTGTGCCGTAACTTGTTCAATAAAATCTATAATTTCAATGTCGCCGTAtgcg                                         <  1:1512488/100‑3 (MQ=255)                                         aaGTATTTAATTGCATTACCTATTGCGAATGCTAATTGTGGTGGGTACTGTGCCGTAACTTGTTCAATAAAATCTATAATTTCAATGTCGCCGTATgtgt                                        <  1:1544237/100‑1 (MQ=255)                                         aaGTATTTAATTGCATTACCTATTGCGAATGCTAATTGTGGTGGGTACTGTGCCGTAACTTGTTCAATAAAATCTATAATTTCAATGTCGCCGTATgtgt                                        <  1:2870058/100‑1 (MQ=255)                                          aGTATTTAATTGCATTACCTATTGCGAATGCTAATTGTGGTGGGTACTGTGCCGTAACTTGTTCAATAAAATCTATAATTTCAATGTCGCCGTATGTGTa                                       <  1:4371998/100‑1 (MQ=255)                                          aGTAATTAATTGCATTGCCTATTGCGAATGCTAATTGTGGTGGGTCCTGTGCCGTAAATTGTTCAATAAAATCTATAATTTCAATGTCGCCGTATGTGTa                                       <  1:195713/100‑1 (MQ=255)                                           gTATTTAATTGCATTACCTATTGCGAATGCTAATTGTGGTGGGTACTGTGCCGTAACTTGTTCAATAAGATCTATAATTTCAATGTCGCCGTATGTGTat                                      <  1:1519736/100‑2 (MQ=255)                                              tttAATTGCATTACCTATTGCGAATGCTAATTGTGGTGGGTACTGTGCCGTAACTTGTTCAATAAAATCTATAATTTCAATGTCGCCGTATGTGTAATga                                   <  1:32965/100‑2 (MQ=255)                                                   ttGCATTACCTATTGCGAATGCTAATTGTGGTGGGTACTGTGCCGTAACTTGTTCAATAAAATCTATAATTTCAATGTCGCCGTATGTGTAATGTGCTgg                              <  1:2799314/100‑1 (MQ=255)                                                   ttGCATTACCTATTGCGAATGCTAATTGTGGTGGGTACTGTGCCGTAACTTGTTCAATAAAATCTATAATTTCAATGTCGCCGTATGTGTAATGTGCTgg                              <  1:3671227/100‑1 (MQ=255)                                                    tGCATTACCTATTGCGAATGCTAATTGTGGTGGGTACTGTGCCGTAACTTGTTCAATAAAATCTATAATTTCAATGTCGCCGTATGTGTAATGTGCTGgt                             <  1:4267203/100‑1 (MQ=255)                                                                               tggtggGTACTGTGCCGTAACTTGTTCAATAAAATCTATAATTTCAATGTCGCCGTATGTGTAATGTGCTGGTTGCTTAACATTGTCTTGCATttcattc  <  1:2660787/100‑1 (MQ=255)                                                                                     |                                                                                              TGCTAAATCCTCATGACCATTCTTTAACGGTGCTCTAGACAAGTATTTGATTGCATTACCTATTGCGAATGCTAATTGTGGTGGATACTGTGCCGTAACTTGTTCGATGAAATCTATAATTTCAATGTCGCCGTATGTGTAATGCGCAGGTTGTTTAACATTGTCTTGTGTTTCATTC  >  NC_007793/1580590‑1580767

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑