| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 1,579,978 | T→C | E30E (GAA→GAG) | SAUSA300_RS07735 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 1,579,978 | 0 | T | C | 100.0% | 24.7 / NA | 15 | E30E (GAA→GAG) | SAUSA300_RS07735 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (2/13); total (2/13) | |||||||||||
CTTCATCAAGACCAATATCTTCTTTGAGTGCATCTTGCATAGCATTAGGTAAACCTTCAAGTATTTCATCAAACGCTTGCGCTTTCTTATACACGTCTTCAATCTCTTTTAGTAATCCCTCTGTGTCATTGCCGTTATACGCACTAGCACTGATAATTGATTGTTCAATTTGTTCGCGGTTATTCA > NC_007793/1579881‑1580066 | cTTCATCAAGACCAATATCTTCTTTGAGTGCATCTTGCATAGCATTAGGTAAACCCTCAAGTATTTCATCAAACGCTTGTGCTTTCTTATACACGTCCTc < 1:3080428/100‑1 (MQ=255) aCCAATATCTTCTTTGAGTGCATCTTGCATAGCATTAGGTAAACCCTCAAGTATTTCATCAAACGCTTGTGCTTTCTTATACACGTCCTCAATCTCtttt < 1:5115415/100‑1 (MQ=255) cAATACCTTCTTTAACTGTATGTTGAATAGCATTTGTCATTCCCTCCAGTATTTCATCAAACGCTTGCGCTTTCTTATATACGTCCTCAATCTCTTTTAg > 1:5519834/1‑100 (MQ=9) atacCTTCTTTAACTGAATGTTGAATAGCATTTGTCATTCCCTCAAGTATTTCATCAAACGCTTGCGCTTTCTTATATACGTCCTCAATCTCTTTTAGTa < 1:640791/100‑1 (MQ=9) tcttTGAGTGCATCTTGCATAGCATTAGGTAAACCCGCAAGTATTTCATCAAACGCTTGTGCTTTCTTATACACGGCCTCAATCGCTTTTAGCAATCCct < 1:3203830/100‑1 (MQ=21) ctgaatgttGAATAGCATTTGTCATTCCCTCAAGTATTTCATCAAACGCTTGCGCTTTCTTATATACGTCCTCAATCTCTTTTAGTAATCCCTCTGTGTc < 1:148918/93‑1 (MQ=14) ctgaatgttGAATAGCATTTGTCATTCCCTCAAGTATTTCATCAAACGCTTGCGCTTTCTTATATACGTCCTCAATCTCTTTTAGTAATCCCTCTGTGTc < 1:5710706/93‑1 (MQ=14) gaatgttGAATAGCATTTGTCATTCCCTCAAGTATTTCATCAAACGCTTGCGCTTTCTTATATACGTCCTCAATCTCTTTTAGTAATCCCTCTGTGTCag < 1:1708752/95‑2 (MQ=14) gaatgttGAATAGCATTTGTCATTCCCTCAAGTATTTCATCAAACGCTTGCGCTTTCTTATATACGTCCTCAATCTCTTTTAGTAATCCCTCTGTGTCAt < 1:5183183/95‑1 (MQ=14) atgttGAATAGCATTTGTCATTCCCTCAAGTATTTCATCAAACGCTTGCGCTTTCTTATATACGTCCTCAATCTCTTTTAGTAATCCCTCTGTGTCAtga < 1:352948/97‑3 (MQ=14) tGCATAGCATTAGGTAAACCCTCAAGTATTTCATCAAACGCTTGTGCTTTCTTATACACGTCCTCAATCTCTTTTAGCAATCCCTCCGCGTCagatcgga > 1:3569134/1‑93 (MQ=17) aTAGCATTAGGTAAACCCTCAAGTATTTCATCAAACGCTTGTGCTTTCTTATACACGTCCTCAATCTCTTTTAGCAATCCCTCTGTGTCATTACCGTtat < 1:3264323/100‑1 (MQ=17) tAAACCCTCAAGTATTTCATCAAACGCTTGTGCTTTCTTATACACGTCCTCAATCTCTTTTAGCAATCCCTCTGTGTCATTACCGTTATACGCACTAggc < 1:2068406/100‑3 (MQ=14) gcTTTCTTATATACGTCCTCAATCTCTTTTAGTAATCCCTCTGTGTCATTGCCGTTATACGCACTAGCACTTATAACGGATTGTTCTATTTGTTCACGGt < 1:6000039/100‑1 (MQ=11) ttATATACGTCCTCAATCTCTTTTAGTAATCCCTCTGTGTCATTGCCGTTATACGCACTAGCACTTATAACGGATTGTTCTATTTGTTCACGGtcgcagt < 1:4017374/100‑7 (MQ=11) | CTTCATCAAGACCAATATCTTCTTTGAGTGCATCTTGCATAGCATTAGGTAAACCTTCAAGTATTTCATCAAACGCTTGCGCTTTCTTATACACGTCTTCAATCTCTTTTAGTAATCCCTCTGTGTCATTGCCGTTATACGCACTAGCACTGATAATTGATTGTTCAATTTGTTCGCGGTTATTCA > NC_007793/1579881‑1580066 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |