| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 1,579,182 | T→A | K24N (AAA→AAT) | SAUSA300_RS07725 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 1,579,182 | 0 | T | A | 100.0% | 10.3 / NA | 6 | K24N (AAA→AAT) | SAUSA300_RS07725 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (2/4); total (2/4) | |||||||||||
TTCTTCTTTACTCTCTGCCTCAACAACTGTAAACCTTTGATTGCTTTTAGCTTTAGTTATGTGTGTATGCTTGCGTCCTGTTGAATCTTTGAATGTTGTGACTAAGTATTGCGTCACTTCCCCAAAACCTCCTTGA > NC_007793/1579137‑1579272 | ccgatcttTACTCTCTGCCTCAACAACTGTAAACCTTTGATTGCTATTAGCTTTAGTTATGTGTGTATGCTTGCGTCCTGTTGAATCTTTGAAtgttgtt < 1:513691/96‑2 (MQ=255) ctcttccgatctGCCTCGACAACTGTAAACCTTTGATTGCTATTAGCTTTAGTTATGTGTGTATGCTTGCGACCTGTTGAATCTTTGAATGTTGTGACTa < 1:1724527/91‑1 (MQ=14) gCCTCAACAACTGTAAACCTTTGATTGCTATTAGCTTTAGTTATGTGTGTATGCTTGCGTCCTGTTGAATCTTTGAATGTTGTGACTAAGTATTGTGTct < 1:4831664/100‑2 (MQ=255) gCCTCAACAACTGTAAACCTTTGATTGCTATTAGCTTTAGTTATGTGTGTATGCTTGCGTCCTGTTGAATCTTTGAATGTTGTGACTAAGTATTGTGTCa > 1:1542752/1‑100 (MQ=255) gTAAACCTTTGATTGCTATTAGCTTTAGTTATGTGTGTATGCTTGCGTCCTGTTGAATCTTTGAATGTTGTGACTAAGTATTGCGTCACTTCCCCAAAAc > 1:1090787/1‑100 (MQ=255) ttGATTGCTATTAGCTTTAGTTATGTGTGTATGCTTGCGTCCTGTTGAATCTTTGAATGTTGTGACTAAGTATTGTGTCACTTCCCCAACACCTCCTTgt < 1:4338468/100‑2 (MQ=255) | TTCTTCTTTACTCTCTGCCTCAACAACTGTAAACCTTTGATTGCTTTTAGCTTTAGTTATGTGTGTATGCTTGCGTCCTGTTGAATCTTTGAATGTTGTGACTAAGTATTGCGTCACTTCCCCAAAACCTCCTTGA > NC_007793/1579137‑1579272 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |