| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 1,578,993 | G→A | L20L (CTA→TTA) | SAUSA300_RS07720 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 1,578,993 | 0 | G | A | 100.0% | 29.4 / NA | 12 | L20L (CTA→TTA) | SAUSA300_RS07720 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (2/10); total (2/10) | |||||||||||
TTTAACCCATACTTCATTGTTGAACACATCTTTGACCGGAAGAAAATCCTCAATCACTAGATTCATAACAAGATTAATATAATCGTCAGAAGCTAGATCTGTTGTTGTGTAATAAACTCTATCTGAAATAGTTTTAATTTTAACCTCCGTCATTTCCCACACTCCCTTATATTTTCAAATAACTGACCCACTT > NC_007793/1578898‑1579090 | tttAACCCATACTTCATTGTTGAACACATCTTTGACCGGAAGAAAATCCTCAAACACTAGGTTCATAACAAGATTAATATAATCGTCAGAAGCTAAATCt > 1:6387324/1‑100 (MQ=255) cTTCATTGTTGAACACATCTTTGACCGGAAGAAAATCCTCAAACACTAGGTTCATAACAAGATTAATATAATCGTCAGAAGCTAAATCTGTTGTTGTGta < 1:6564458/100‑1 (MQ=255) ttGACCGGAAGAAAATCCTCAAACACTAGGTTCATAACAAGATTAATATAATCGTCAGAAGCTAAATCTGTTGTTGTGTAATAAACTCTATCTGAAATAg > 1:4552620/1‑100 (MQ=255) aaacACTAGGTTCATAACAAGATTAATAGAATCGTCAGAAGCTAAATCTGTTGTTGTGTAATAAACTCTATCTGAAATAGTTTTAATTTTAACCACCgcc < 1:6269197/97‑3 (MQ=255) acACTAGGTTCATAACAAGATTAATATAATCGTCAGAAGCTAAATCTGTTGTTGTGTAATAAACTCTATCTGAAATAGTTTTAATTTTAACCACCGTCAt < 1:2691460/99‑1 (MQ=255) cACTAGGTTCATAACAAGATTAATATAATCGTCAGAAGCTAAATCTTTTGTTGTGTAACAAACTCTATCTGAAATAGTTTTAATTTTAACCACCGTCAtg < 1:805665/100‑2 (MQ=255) aCTAGGTTCATAACAAGATTAATATAATCGTCAGAAGCTAAATCTGTTGTTGTGTAATAAACTCTATCTGAAATAGTTTTAATTTTAACCACCATCAttg < 1:5856423/100‑2 (MQ=255) gttCATAACAAGATTAATATAATCGTCAGAAGCTAAATCTGTTGTTGTGTAATAAACTCTATCTGAAATAGTTTTAATTTTAACCACCGTCATTTCCcac < 1:174955/99‑1 (MQ=255) gttCATAACAAGATTAATATAATCGTCAGAAGCTAAATCTGTTGTTGTGTAATAAACTCTATCTGAAATAGTTTTAATTTTAACCACCGTCATTTCCcac < 1:360057/99‑1 (MQ=255) tCATAACAAGATTAATATAATCGTCAGAAGCTAAATCTGTTGTTGTGTAATAAACTCTATCTGAAATAGTTTTAATTTTAACCACCGTCATTTCCcacag < 1:4161458/100‑2 (MQ=255) aaGATTAATATAATCGTCAGAAGCTAAATCTGTTGTTGTGTAATAAACTCTATCTGAAATAGTTTTAATTTTAACCACCGTCATTTCCCACACTCCCtgt < 1:4748137/100‑3 (MQ=255) tataATCGTCAGAAGCTAAATCTGTTGTTGTGTAATAAACTCTATCTGAAATAGTTTTAATTTTAACCACCGTCATTTCCCACACTCCCTTATATTTTCa < 1:2903441/100‑1 (MQ=255) ccgATCTGTTGTTGTGTAATAAACTCTATCTGAAATAGTTTTAATTTTAACCACCGTCATTTCCCACACTCCCTTATATTTTCAAACAACTGACTCACta < 1:4121431/98‑2 (MQ=37) | TTTAACCCATACTTCATTGTTGAACACATCTTTGACCGGAAGAAAATCCTCAATCACTAGATTCATAACAAGATTAATATAATCGTCAGAAGCTAGATCTGTTGTTGTGTAATAAACTCTATCTGAAATAGTTTTAATTTTAACCTCCGTCATTTCCCACACTCCCTTATATTTTCAAATAACTGACCCACTT > NC_007793/1578898‑1579090 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |