| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 1,578,958 | A→G | N31N (AAT→AAC) | SAUSA300_RS07720 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 1,578,958 | 0 | A | G | 100.0% | 39.1 / NA | 17 | N31N (AAT→AAC) | SAUSA300_RS07720 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (4/13); total (4/13) | |||||||||||
CTCCTTAATAAATGTAAATGATTCAATCTCATCTCTTTTAACCCATACTTCATTGTTGAACACATCTTTGACCGGAAGAAAATCCTCAATCACTAGATTCATAACAAGATTAATATAATCGTCAGAAGCTAGATCTGTTGTTGTGTAATAAACTCTATCTGAAATAGTTTTAATTTTAACCTCCGTCATTT > NC_007793/1578862‑1579052 | ctcctTAATAAATGTAAATGATTCAATCTCATCTCTTTTAACCCATACTTCATTGTTGAACACATCTTTGACCGGAAGAAAATCCTCAAACACTAGGTTc < 1:987903/100‑1 (MQ=255) tcctTAATAAATGTAAATGATTCAATCTCATCTCTTTTAACCCATACTTCATTGTTGAACACATCTTTGACCGGAAGAAAATCCTCAAACACTAGGTTCa < 1:184235/100‑1 (MQ=255) ctTAATAAATGTAAATGATTCAATCTCATCTCTTTTAACCCATACTTCATTGTTGAACACATCTTTGACCGGAAGAAAATCCTCAAACACTAGGTTCAtg < 1:5106245/100‑2 (MQ=255) taaatgATTCAATCTCATCTCTTTTAACCCATACTTCATTGTTGAACACATCTTTGACCGGAAGAAAATCCTCAAACACTAGGTTCATAACAAGATTAat < 1:2258866/100‑1 (MQ=255) taaatgATTCAATCTCATCTCTTTTAACCCATACTTCATTGTTGAACACATCTTTGACCGGAAGAAAATCCTCAAACACTAGGTTCATAACAAGATTAat < 1:6588081/100‑1 (MQ=255) cAATCTCATCTCTTTTAACCCATACTTCATTGTTGAACACATCTTTGACCGGAAGAAAATCCTCAAACACTAGGTTCATAACAAGATTAATATAATCGTc < 1:2723360/100‑1 (MQ=255) cAATCTCATCTCTTTTAACCCATACTTCATTGTTGAACACATCTTTGACCGGAAGAAAATCCTCAAACACTAGGTTCATAACAAGATTAATATAATCGTc < 1:247867/100‑1 (MQ=255) ctcatctcTTTTAACCCATACTTCATTGTTGAACACATCTTTGACCGGAAGAAAATCCTCAAACACTAGGTTCATAACAAGATTAATATAATCGTCAGat < 1:3304512/100‑2 (MQ=255) catctcTTTTAACTCATACTTCATTGTTGAACACATCTTTGACCGGAAGAAAATCCTCAAACACTAGGTTCATAACAAGATTAATATAATCGTCAGAAGc > 1:5126384/1‑100 (MQ=255) catctcTTTTAACCCATACTTCATTGTTGAACACATCTTTGACCGGAAGAAAATCCTCAAACACTAGGTTCATAACAAGATTAATATAATCGTCAGAAGc > 1:5170450/1‑100 (MQ=255) tttAACCCATACTTCATTGTTGAACACATCTTTGACCGGAAGAAAATCCTCAAACACTAGGTTCATAACAAGATTAATATAATCGTCAGAAGCTAAATCt > 1:6387324/1‑100 (MQ=255) cTTCATTGTTGAACACATCTTTGACCGGAAGAAAATCCTCAAACACTAGGTTCATAACAAGATTAATATAATCGTCAGAAGCTAAATCTGTTGTTGTGta < 1:6564458/100‑1 (MQ=255) ttGACCGGAAGAAAATCCTCAAACACTAGGTTCATAACAAGATTAATATAATCGTCAGAAGCTAAATCTGTTGTTGTGTAATAAACTCTATCTGAAATAg > 1:4552620/1‑100 (MQ=255) aaacACTAGGTTCATAACAAGATTAATAGAATCGTCAGAAGCTAAATCTGTTGTTGTGTAATAAACTCTATCTGAAATAGTTTTAATTTTAACCACCgcc < 1:6269197/97‑3 (MQ=255) acACTAGGTTCATAACAAGATTAATATAATCGTCAGAAGCTAAATCTGTTGTTGTGTAATAAACTCTATCTGAAATAGTTTTAATTTTAACCACCGTCAt < 1:2691460/99‑1 (MQ=255) cACTAGGTTCATAACAAGATTAATATAATCGTCAGAAGCTAAATCTTTTGTTGTGTAACAAACTCTATCTGAAATAGTTTTAATTTTAACCACCGTCAtg < 1:805665/100‑2 (MQ=255) aCTAGGTTCATAACAAGATTAATATAATCGTCAGAAGCTAAATCTGTTGTTGTGTAATAAACTCTATCTGAAATAGTTTTAATTTTAACCACCATCAttg < 1:5856423/100‑2 (MQ=255) | CTCCTTAATAAATGTAAATGATTCAATCTCATCTCTTTTAACCCATACTTCATTGTTGAACACATCTTTGACCGGAAGAAAATCCTCAATCACTAGATTCATAACAAGATTAATATAATCGTCAGAAGCTAGATCTGTTGTTGTGTAATAAACTCTATCTGAAATAGTTTTAATTTTAACCTCCGTCATTT > NC_007793/1578862‑1579052 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |