| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 1,578,544 | G→A | L28L (CTA→TTA) | SAUSA300_RS07710 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 1,578,544 | 0 | G | A | 100.0% | 24.1 / NA | 15 | L28L (CTA→TTA) | SAUSA300_RS07710 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (1/14); total (1/14) | |||||||||||
TATTTATCTGTAATAGTTCCTTGATGTAATTCTTTGTGTTGGTAACTAGCCACTGTATAGATAGGCAATGTGATAACAAGTAGCAATGCGAATATACCGAATAATGACAGTATTCCAACAATAAAGATGTCGAACCCATCCATATTTTTAAGTTTTTTAATCATCATTGTCATCTCCAG > NC_007793/1578462‑1578640 | tatTTATCTGTAATTGTTCCTTGGTGCGTTTCTTTGTGTTGGTAACTAGCCACTGTATAGATAGGAAATGTGACAACAAGTAACAATGCGAATATGCCgg < 1:3316740/100‑2 (MQ=14) tgTTCCTTGGTGCGTTTCTTTGTGTTGGTAACTAGCCACTGTATAGATAGGAAATGTGACAACAAGTAACAATGCGAATATGCCGAATAATGACAGTact < 1:5489666/99‑3 (MQ=14) tgcgtttCTTTGTGTTGGTAACTAGCCACTGTATAGATAGGAAATGTGACAACAAGTAACAATGCGAATATGCCGAATAATGACAGTACTCCAACAATaa < 1:2252707/95‑1 (MQ=14) tgcgtttCTTTGTGTTGGTAACTAGCCACTGTATAGATAGGAAATGTGACAACAAGTAACAATGCGAATATGCCGAATAATGACAGTACTCCAACAATaa < 1:3221420/95‑1 (MQ=14) tgcgtttCTTTGTGTTGGTAACTAGCCACTGTATAGATAGGAAATGTGACAACAAGTAACAATGCGAATATGCCGAATAATGACAGTACTCCAACAATaa < 1:4634423/95‑1 (MQ=14) tgcgtttCTTTGTGTTGGTAACTAGCCACTGTATAGATAGGAAATGTGACAACAAGTAACAATGCGAATATGCCGAATAATGACAGTACTCCAACAATaa < 1:5817031/95‑1 (MQ=14) cgtttCTTTGTGTTGGTAACTAGCCACTGTATAGATAGGAAATGTGACAACAAGTAACAATGCGAATATGCCGAATAATGACAGTACTCCAACAATAAAg < 1:5513359/97‑1 (MQ=14) gacaaCAAGTAACAATGCGAATATGCCGAATAATGACAGTTCTCCAACAATAAAGATATCGAACCAATCCATATTTTTAAGTTTTTTAATCATCATTGTc < 1:827633/97‑1 (MQ=14) gacaaCAAGTAACAATGCGAATATGCCGAATAATGACAGTACTCCAACAATAAAGATATCGAACCAATCCATATTTTTAAGTTTTTTAATCATCATTGTc < 1:1074854/97‑1 (MQ=14) gacaaCAAGTAACAATGCGAATATGCCGAATAATGACAGTACTCCAACAATAAAGATATCGAACCAATCCATATTTTTAAGTTTTTTAATCATCATTGTc < 1:2655141/97‑1 (MQ=14) caaCAAGTAACAATGCGAATATGCCGAATAATGACAGTACTCCAACAATAAAGATATCGAACCAATCCATATTTTTAAGTTTTTTAATCATCATTGTCaa < 1:1597321/99‑2 (MQ=14) caaCAAGTAACAATGCGAATATGCCGAATAATGACAGTACTCCAACAATAAAGATATCGAACCAATCCATATTTTTAAGTTTTTTAATCATCATTGTCAt < 1:2765804/99‑1 (MQ=14) caaCAAGTAACAATGCGAATATGCCGAATAATGACAGTACTCCAACAATAAAGATATCGAACCAATCCATATTTTTAAGTTTTTTAATCATCATTGTCAt > 1:3260378/2‑100 (MQ=14) caaCAAGTAACAATGCGAATATGCCGAATAATGACAGTACTCCAACAATAAAGATATCGAACCAATCCATATTTTTAAGTTTTTTAATCATCATTGTCAt < 1:4967706/99‑1 (MQ=14) gTAACAATGCGAACATGCCGAATAATGACAGTACTCCAACAATAAAGATATCGAACCAATCCATATTTTTAAGTTTTTTAATCATCATTGTCATCTCCAg < 1:6025373/100‑1 (MQ=17) | TATTTATCTGTAATAGTTCCTTGATGTAATTCTTTGTGTTGGTAACTAGCCACTGTATAGATAGGCAATGTGATAACAAGTAGCAATGCGAATATACCGAATAATGACAGTATTCCAACAATAAAGATGTCGAACCCATCCATATTTTTAAGTTTTTTAATCATCATTGTCATCTCCAG > NC_007793/1578462‑1578640 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |