| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 1,578,476 | A→T | T50T (ACT→ACA) | SAUSA300_RS07710 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 1,578,476 | 0 | A | T | 100.0% | 27.1 / NA | 15 | T50T (ACT→ACA) | SAUSA300_RS07710 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (1/14); total (1/14) | |||||||||||
AATAATAAGTCGGAATTTTCAATGACTTGTTTGTTGTCTAATACAATATAGAACTTGTCTTCTTTATCTTGTCTCTTGTTATATTTATCTGTAATAGTTCCTTGATGTAATTCTTTGTGTTGGTAACTAGCCACTGTATAGATAGGCAATGTGATAACAAGTAGCAATGCGAATATACCGA > NC_007793/1578381‑1578561 | aataatAAGTCGGAATTTTCAATGACTTGCTTGTTGTCTAATACAATATAGAACTTGTCTTCTTTATCTTGTCTCTTGTTATATTTATCTGTAATTGTTc < 1:4103600/100‑1 (MQ=255) ataaGTCGGAATTTTCAATGACTTGCTTGTTGTCTAATACAATATAGAACTTGTCTTCTTTATCTTGTCTCTTGTTATATTTATCTGTAATTGTTCCTTg < 1:2355152/100‑1 (MQ=255) tCGGAATTTTCAATGACTTGCTTGTTGTCTAATACAATATAGATCTTGTCTTCTTTATCTTGTCTCTTGTTATATTTATCTGTAATTGTTCCTTGGTgcg < 1:3987297/100‑3 (MQ=18) ggAATTTTCAATGACTTGCTTGTTGTCTAATACAATATAGAACTTGTCTTCTTTATCTTGTCTCTTGTTATATTTATCTGTAATTGTTCCTTGGTgcgtt < 1:1264401/100‑5 (MQ=18) ggAATTTTCAATGACTTGCTTGTTGTCTAATACAATATAGAACTTGTCTTCTTTATCTTGTCTCTTGTTATATTTATCTGTAATTGTTCCTTGGTgcgtt < 1:6587635/100‑5 (MQ=18) gAATTTTCAATGACTTGCTTGTTGTCTAATACAATATAGAACTTGTCTTCTTTATCTTGTCTCTTGTTATATTTATCTGTAATTGTTCCTTGGTgcgggg < 1:787369/100‑6 (MQ=18) tttCAATGACTTGCTTGTTGTCTAATACAATATAGAACTTGTCTTCTTTATCTTGTCTCTTGTTATATTTATCTGTAATTGTTCCTTGGTgcgtttcttg < 1:763062/100‑10 (MQ=17) ccgatcTTGTTTGTTGTCTAATACAATATAGAACTTGTCTTCTTTATCTTGTCTCTTGTTATATTTATCTGTAAGTGTTCCTTGGTGCGTTTCTTTgtgt < 1:6490527/95‑1 (MQ=17) aCTTGCTTGTTGTCTAATACAATATAGAACTTGTCTTCTTTATCTTGTCTCTTGTTATATTTATCTGTAATTGTTCCTTGGTGCGTTTCTTTGTGTTGGt < 1:4682882/100‑1 (MQ=17) aaTACAATATAGAACTTGTCTTCTTTATCTTGTCTCTTGTTATATTTATCTGTAATTGTTCCTTGGTGCGTTTCTTTGTGTTGGTAACTAGCCACTGtat < 1:1190554/100‑1 (MQ=14) aaTACAATATAGAACTTGTCTTCTTTATCTTGTCTCTTGTTATATTTATCTGTAATTGTTCCTTGGTGCGTTTCTTTGTGTTGGTAACTAGCCACTGtat < 1:6154367/100‑1 (MQ=14) aaTACAATATAAAACTTGTCTTCTTTATCTTGTCTCTTGTTATATTTATCTGTAATTGTTCCTTGGTGCGTTTCTTTGTGTTGGTAACTAGcctcgtata > 1:461009/1‑93 (MQ=14) aTACAATATAGAACTTGTCTTCTTTATCTTGTCTCTTGTTATATTTATCTGTAATTGTTCCTTGGTGCGTTTCTTTGTGTTGGTAACTAGCCACTGtata < 1:4351254/100‑1 (MQ=14) cttccgaTCTTGTCTCTTGTTATATTTATCTGTAATTGTTCCTTGGTGCGTTTCTTTGTGTTGGTAACTAGCCACTGTATAGATAGGAAATGTGacaaca < 1:3054264/94‑1 (MQ=11) tatTTATCTGTAATTGTTCCTTGGTGCGTTTCTTTGTGTTGGTAACTAGCCACTGTATAGATAGGAAATGTGACAACAAGTAACAATGCGAATATGCCgg < 1:3316740/100‑2 (MQ=14) | AATAATAAGTCGGAATTTTCAATGACTTGTTTGTTGTCTAATACAATATAGAACTTGTCTTCTTTATCTTGTCTCTTGTTATATTTATCTGTAATAGTTCCTTGATGTAATTCTTTGTGTTGGTAACTAGCCACTGTATAGATAGGCAATGTGATAACAAGTAGCAATGCGAATATACCGA > NC_007793/1578381‑1578561 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |