| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 1,544,669 | C→A | M1M (ATG→ATT) † | SAUSA300_RS07525 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 1,544,669 | 0 | C | A | 100.0% | 26.5 / NA | 11 | M1M (ATG→ATT) † | SAUSA300_RS07525 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (0/11); total (0/11) | |||||||||||
TCTGTATTTGTGTCTTTTTTTGATTCATTATTCATCGCTGAACATCCTGATAACAGTAGCGTTGCTATTAAGATTAATTTCGCCTTTTTAAACATAGCTCATCACCCATTTATGTGTTTATATAGAATATTAAAAAGCATTTT‑‑AAAAAAATTTATTCATCTTTACGATACACTCCATATTCTATTGG > NC_007793/1544577‑1544763 | tctgtatttgtGTCTTTTTTTGATTCATTATTCATCGCTGAACATCCTGATAACAGTAGCGTTGCTATTAAGATTAATTTCGCCTTTTTAAAAATAGCtt < 1:2157680/100‑2 (MQ=255) ttgtGTCTTTTTTTGATTCATTATTCATCGCTGAACATCCTGATAACAGTAGCGTTGCTATTAAGATTAATTTCGCCTTTTTAAAAATAGCTCATCAccc < 1:533777/100‑1 (MQ=255) tgtgTCTTTTTTTGATTCACTATTCATCGCTGAACATCCTGATAACAGTAGCGTTGCTATTAAGATTAATTTCGCCTTTTTAAAAATAGCTCATCACCCa < 1:1469499/100‑1 (MQ=255) tgtCTTTTTTTGATTCATTATTCATCGCTGAACATCCTGATAACAGTAGCGTTGCTATTAAGATTAATTTCGCCTTTTTAAAAATAGCTCATCACCCAtc < 1:117152/100‑2 (MQ=255) gtCTTTTTTTGATTCATTATTCATCGCTTAACATCCTGATAACAGTAGCGTTGCTATTAAGATTAATTTCGCCTTTTTAAAAATAGCTCATCTCCCAtaa < 1:5452318/100‑3 (MQ=37) cttccgatctGATTCGTTATTCATCGCTGAACATCCTGATAACAGTAGCGTTGCTATTAAGATTAATTTCGCCTTTTTAAAAATAGCTCATCACCCAttt < 1:4525790/91‑1 (MQ=21) ctCATCGCTGAACATCCTGATAACAGTAGCGTTGCTATTAAGATTAATTTCGCCTTTTTAAAAATAGCTCATCACCCATTTATGTGTTTATATAGAatat < 1:2649100/99‑1 (MQ=255) gCCTTTTTAAAAATAGCTCATCACCCATTTATGTGTTTATATAGAATATTAAAAAGCATTTT‑‑AAAAAAATTTATTCATCTTTACGATACACTCCatacac < 1:1056930/100‑4 (MQ=255) ttttAAAAATAGCTCATCGCCCATTTATGTGTTTATATAGAATATTAAAAAGCATTTT‑‑AAAAAAATTTATTCATCTTTACGATACACTCCATATTCTAtt < 1:5719516/100‑1 (MQ=255) ttAAAAATAGCTCATCACCCATTTATGTGTTTATATAGAATATTAAAAAGCATTTTAAAAAAAAATTTATTCATCTTTACGATACACTCCATATTCTAtt < 1:5140299/100‑1 (MQ=38) ttAAAAATAGCTCACCACCCATTTATGTGTTTATATAGAATATTAAAAAGCATTTT‑‑AAAAAAATTTATTCATCTTTACGATACACTCCATATTCTATTgg < 1:4989915/100‑1 (MQ=255) | TCTGTATTTGTGTCTTTTTTTGATTCATTATTCATCGCTGAACATCCTGATAACAGTAGCGTTGCTATTAAGATTAATTTCGCCTTTTTAAACATAGCTCATCACCCATTTATGTGTTTATATAGAATATTAAAAAGCATTTT‑‑AAAAAAATTTATTCATCTTTACGATACACTCCATATTCTATTGG > NC_007793/1544577‑1544763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |