D3A :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,541,574	T→A	K145N (AAA→AAT)	SAUSA300_RS07505 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,541,574	0	T	A	99.5%	588.2 / ‑6.0	201	K145N (AAA→AAT)	SAUSA300_RS07505	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (6/194); minor base G (0/1); total (6/195)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.68e-01

Only 100 of 202 total aligned reads displayed.

AGAAATTCGCAAGCCTTCTATATAGTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACTTTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAATAGAACGAAATAGTTCAAAATACTCAACACGATAGTCAT  >  NC_007793/1541477‑1541666

aGAAATTCGCAAGCCTTCTATATAGTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACatt                                                                                            <  1:5651608/100‑1 (MQ=255)

 gAAATTCGCAAGCCTTCTATATAGTAAAATAAATACAATAGAAATAACGATTCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTa                                                                                           <  1:6610563/100‑1 (MQ=255)

 gAAATTCGCAAGCCTTCTATATAGTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTa                                                                                           <  1:349219/100‑1 (MQ=255)

 gAAATTCGCAAGCCTTCTATATAGTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTa                                                                                           <  1:2534470/100‑1 (MQ=255)

 gAAATTCGCAAGCCTTCTATATAGTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTa                                                                                           <  1:53827/100‑1 (MQ=255)

 gAAATTCGCAAGCCTTCTATATAGTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTa                                                                                           <  1:1511115/100‑1 (MQ=255)

 gAAATTCGCAAGCCTTCTATATAGTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTa                                                                                           <  1:4423869/100‑1 (MQ=255)

      acGCAAGCCTTCTATATAGTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGAATGGTACAATTCCTGAAACAATGATTACATTAAGatt                                                                                      >  1:3217990/2‑100 (MQ=255)

       cGCAAGCCTTCTATATAGTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGatta                                                                                     >  1:2750000/1‑100 (MQ=255)

             ccTTCTATATAGTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCg                                                                               <  1:1731547/100‑1 (MQ=255)

             ccTTCTATATAGTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCg                                                                               <  1:5630178/100‑1 (MQ=255)

             ccTTCTATATAGTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCg                                                                               <  1:1796198/100‑1 (MQ=255)

               ttCTATATAGTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGat                                                                             <  1:2801211/100‑1 (MQ=255)

               ttCTATATAGTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGat                                                                             <  1:857122/100‑1 (MQ=255)

               ttCTATATAGTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGag                                                                             <  1:3926663/100‑2 (MQ=255)

                tCTATATAGTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGATTGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGata                                                                            <  1:2903184/100‑1 (MQ=255)

                tCTATATAGTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGatg                                                                            <  1:3983076/100‑2 (MQ=255)

                  tatataGTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTGCATTAAGATTATTTGCGATATc                                                                          <  1:4780842/100‑1 (MQ=255)

                  tatataGTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATc                                                                          <  1:2856512/100‑1 (MQ=255)

                  tatataGTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATc                                                                          <  1:119853/100‑1 (MQ=255)

                     ataGTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGAGATcgga                                                                       >  1:2695747/1‑97 (MQ=255)

                      tggTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCt                                                                      <  1:5498024/98‑1 (MQ=255)

                      taGTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCt                                                                      <  1:3320790/100‑1 (MQ=255)

                      taGTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCt                                                                      <  1:4223498/100‑1 (MQ=255)

                       aGTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTTCATTAAGATTATTTGCGATATCAGCTa                                                                     <  1:6256149/100‑1 (MQ=255)

                       aGTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTa                                                                     <  1:5895836/100‑1 (MQ=255)

                       aGTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTa                                                                     <  1:1620551/100‑1 (MQ=255)

                       aGTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTa                                                                     <  1:2153393/100‑1 (MQ=255)

                       aGTAAAATAAATACAATAGAAATAACGATACCTTTAAAAATATTGAATGGTATGATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTa                                                                     <  1:5250496/100‑1 (MQ=255)

                           aaataaatACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGtt                                                                 <  1:3442674/100‑1 (MQ=255)

                           aaataaatACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGtt                                                                 <  1:3265279/100‑1 (MQ=255)

                             ataaataCAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTaa                                                               <  1:5965946/100‑1 (MQ=255)

                             ataaataCAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTaa                                                               <  1:4310745/100‑1 (MQ=255)

                                aataCAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAata                                                            >  1:6157274/1‑100 (MQ=255)

                                         gAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGt                                                   <  1:2338539/100‑1 (MQ=255)

                                            aTAACGATACCTTTAATAATGTTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTAGTTGCGATATCAGCTAAGTTAAATATCATACCGTACa                                                <  1:6523205/100‑1 (MQ=255)

                                            aTAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACa                                                <  1:4078353/100‑1 (MQ=255)

                                            aTAACGATACCTTTAATAATATAGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACa                                                <  1:1935019/100‑1 (MQ=255)

                                             tAACGATACCTTTAATAATGTTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACaa                                               <  1:2438223/100‑1 (MQ=255)

                                             tAACGATACCTTTAATAATATTGGATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAGTATCATACCGTACaa                                               <  1:6483385/100‑1 (MQ=255)

                                             tAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACat                                               <  1:1274599/100‑2 (MQ=255)

                                             tAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACaa                                               <  1:3622902/100‑1 (MQ=255)

                                             tAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACaa                                               <  1:1413108/100‑1 (MQ=255)

                                             tAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACaa                                               <  1:6339194/100‑1 (MQ=255)

                                             tAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACaa                                               <  1:2016184/100‑1 (MQ=255)

                                             tAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACaa                                               <  1:6057247/100‑1 (MQ=255)

                                             tAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACaa                                               <  1:2564661/100‑1 (MQ=255)

                                             tAACGATACCTTTAATAATATTGAATGGTATAATGCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACaa                                               <  1:3817504/100‑1 (MQ=255)

                                              aaCGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACagg                                              <  1:750163/100‑3 (MQ=255)

                                                cGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAgg                                            <  1:2813012/100‑1 (MQ=255)

                                                  atgccTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAggggc                                          <  1:2367212/97‑3 (MQ=255)

                                                    gccTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:1055993/99‑1 (MQ=255)

                                                    aCCTTTAGTAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:3199763/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATGATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:1381438/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACGTTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:3168314/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:2633691/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:1303405/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:5370066/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:5460253/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:1150157/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:2352302/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:2277216/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:572056/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:221490/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:5916848/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:592408/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:5948029/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:2184642/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:2082875/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:184617/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:1700559/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:6368905/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:4358660/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:3690159/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:3385146/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:3287210/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:4315969/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:5112046/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:4589070/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:4692080/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:4726768/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:3007961/100‑1 (MQ=255)

                                                    aCCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAACTAAGTTAAATATCATACCGTACAAAGGTAAt                                        <  1:5423274/100‑1 (MQ=255)

                                                      cTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAATAg                                      <  1:6430423/100‑1 (MQ=255)

                                                                atTGAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAATAGAACGAAATAg                            <  1:5838558/100‑1 (MQ=255)

                                                                   gAATGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAATAGAACGAAATAGTTc                         <  1:5100128/100‑1 (MQ=255)

                                                                    aaTGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAATAGAACGAAATAGTTCa                        <  1:4186277/100‑1 (MQ=255)

                                                                     aTGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAATAGAACGAAagagcacac                       <  1:5611647/100‑6 (MQ=255)

                                                                      tGGTATAATTCCTGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAATAGAACGAAATAGTTCagg                      <  1:4655686/100‑3 (MQ=255)

                                                                            aagtCCTGAAACAATGAGTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAATAGAACGAAATAGTTCAAAATACTc                <  1:4459566/97‑1 (MQ=255)

                                                                                  tGAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAATAGAACGAAATAGTTCAAAATACTCAACACg          <  1:355023/100‑1 (MQ=255)

                                                                                   gAAACAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAATAGAACGAAATAGTTCAAAATACTCAACACgg         <  1:3344944/100‑2 (MQ=255)

                                                                                    aaaCAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAGTAGAACGAAATAGTTCAAAATACTCAACACGAt        <  1:1026156/100‑1 (MQ=255)

                                                                                    aaaCAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAATAGAACGAAATAGTTCAAAATACTCAACACGag        <  1:3876148/100‑2 (MQ=255)

                                                                                    aaaCAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAATAGAACGAAATAGTTCAAAATACTCAACACGAt        <  1:2097245/100‑1 (MQ=255)

                                                                                    aaaCAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAATAGAACGAAATAGTTCAAAATACTCAACACGAt        <  1:3408534/100‑1 (MQ=255)

                                                                                    aaaCAATGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAATAGAACGAAATAGTTCAAAATACTCAACACGAt        <  1:6645974/100‑1 (MQ=255)

                                                                                          tGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAATAGAACGAAATAGTTCAAAATACTCAACACGATAGTCAt  <  1:4482948/100‑1 (MQ=255)

                                                                                          tGATTACATTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAATAGAACGAAATAGTTCAAAATACTCAACACGATAGTCAt  <  1:4019318/100‑1 (MQ=255)

                                                                                          tGATTACATTAAGACTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAATAGAACGAAATAGTTCAAAATACTCAACACGATAGTCAt  <  1:4912423/100‑1 (MQ=255)

AGAAATTCGCAAGCCTTCTATATAGTAAAATAAATACAATAGAAATAACGATACCTTTAATAATATTGAATGGTATAATTCCTGAAACAATGATTACTTTAAGATTATTTGCGATATCAGCTAAGTTAAATATCATACCGTACAAAGGTAATAGAACGAAATAGTTCAAAATACTCAACACGATAGTCAT  >  NC_007793/1541477‑1541666

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`