Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007793 1,534,172 G→T A116D (GCT→GAT)  SAUSA300_RS07465 ← cytidylate kinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077931,534,1720GT99.5% 535.5 / ‑5.0 193A116D (GCT→GAT) SAUSA300_RS07465cytidylate kinase
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base T (6/186);  total (6/187)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.13e-01

Only 100 of 198 total aligned reads displayed.

CGCTCTTCAACTGATGCAATCATATATACTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCAGCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCTTTAGATGCAACGTATGAAACATGTTGCGTCACATCATT  >  NC_007793/1534073‑1534254
                                                                                                   |                                                                                   
 tcttccgatcTGGTGCAATCATATATACTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCAgg                                                                                    <  1:6288149/91‑2 (MQ=255)
  ttctTCAACTGATGCAATCATATATACTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCt                                                                                   <  1:2278422/99‑1 (MQ=255)
  ctctTCAACTGATGCAATCATATATACTTTTAAATCTGCATCTGGTAGCAGTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCt                                                                                   <  1:3912573/100‑1 (MQ=255)
  ctctTCAACTGATGCAATCATATATACTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCt                                                                                   <  1:3334/100‑1 (MQ=255)
   ttccgatcTGGTGCGATCATATATACTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTa                                                                                  <  1:1699441/93‑1 (MQ=255)
   tctTCAACTGATGCAATCATATATACTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTa                                                                                  <  1:2028059/100‑1 (MQ=255)
   tctTCAACTGATGCAATCATATATACTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTa                                                                                  <  1:2655716/100‑1 (MQ=255)
   tccgatctgtaTGCAATCATATATACTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTa                                                                                  <  1:476452/90‑1 (MQ=255)
     ttCAACTGATGCAACCATATATACTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAAc                                                                                <  1:4913517/100‑1 (MQ=255)
           tggtGCAATCATATATACTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCAGCCATTACGATACCTTTTTCTGCATCTAACTCttcg                                                                          <  1:5852077/97‑3 (MQ=255)
           tggtGCAATCATATATACTTTTAAATCTGCATCTGGCAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCtttt                                                                          >  1:1021121/4‑100 (MQ=255)
             gtGCAATCATATATACTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTg                                                                        >  1:6204640/2‑100 (MQ=255)
              tGCTATCATATATACTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTgg                                                                       <  1:4679697/100‑2 (MQ=255)
                cAATCATATATACTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑ttt                                                                    <  1:5295472/100‑1 (MQ=255)
                 aaTCATATATACTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACTATACCTTTTTCTGCATCTAACTCTTTTTG‑tttt                                                                   <  1:849408/100‑1 (MQ=255)
                   tCATATATACTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑tttttt                                                                 <  1:3866764/100‑1 (MQ=255)
                   tCATATATACTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑tttttt                                                                 <  1:759492/100‑1 (MQ=255)
                    cATATATACTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTa                                                                >  1:5024977/1‑100 (MQ=255)
                        tataCTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACgg                                                            >  1:6434353/1‑100 (MQ=255)
                          taCTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATCCCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCg                                                          <  1:6453230/100‑1 (MQ=255)
                          taCTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCg                                                          <  1:2244679/100‑1 (MQ=255)
                          taCTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCg                                                          <  1:6547152/100‑1 (MQ=255)
                          taCTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCg                                                          <  1:1634803/100‑1 (MQ=255)
                          taCTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCg                                                          <  1:4086261/100‑1 (MQ=255)
                          taCTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCCTTTTG‑TTTTTTAACGGCg                                                          <  1:1989074/100‑1 (MQ=255)
                          taCTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCAGTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCg                                                          <  1:2020421/100‑1 (MQ=255)
                          gctcttccgaTCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCg                                                          <  1:6634497/91‑1 (MQ=255)
                           aCTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATCCCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGa                                                         <  1:5410269/100‑1 (MQ=255)
                           aCTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCgt                                                         <  1:5716178/100‑2 (MQ=255)
                           aCTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGa                                                         <  1:400435/100‑1 (MQ=255)
                           aCTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑GTTTTTAACGGCGa                                                         <  1:6333046/100‑1 (MQ=255)
                           aCTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATAGCGCGACCATCCGTTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCgg                                                         <  1:2228941/100‑2 (MQ=255)
                            tcttccgaTCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGag                                                        <  1:3245659/93‑2 (MQ=255)
                            cTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGaa                                                        <  1:1753257/100‑1 (MQ=255)
                            cTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGaa                                                        <  1:910052/100‑1 (MQ=255)
                             ttttAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGaag                                                       <  1:4344188/100‑2 (MQ=255)
                             ttttAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGaag                                                       <  1:2442410/100‑2 (MQ=255)
                             cttccgaTCTGC‑TCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATg                                                      <  1:5925453/94‑1 (MQ=255)
                              tttAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATg                                                      <  1:5112244/100‑1 (MQ=255)
                               ttAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTGTTTTTTTAGCGGCGAATg                                                      <  1:1056937/100‑1 (MQ=255)
                                     cTGCATCTGGTAGCACTACAGTTCCGATATCGCGGCCATCCAGTACGATACCTTTTTCTCCATCTAACTCTTTTTG‑TTGTTTAACGGCGAATGAACGTAc                                               <  1:2125465/100‑1 (MQ=255)
                                     cTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTAc                                               <  1:809670/100‑1 (MQ=255)
                                      tGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACt                                              <  1:3559430/100‑1 (MQ=255)
                                      tGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACCCTTTTTG‑TTTTTTAACGGCGAATGAACGTAca                                              <  1:1128426/100‑2 (MQ=255)
                                       gCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTg                                             <  1:2675584/100‑1 (MQ=255)
                                       gCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTg                                             <  1:1445653/100‑1 (MQ=255)
                                        cATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTGCTgg                                            <  1:1361158/100‑1 (MQ=255)
                                        cATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTgg                                            <  1:3848253/100‑1 (MQ=255)
                                        cATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTgg                                            <  1:313590/100‑1 (MQ=255)
                                        cATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTgg                                            <  1:1923816/100‑1 (MQ=255)
                                        cATCTGGTAGCACTACAGTTCCGATATCGCAACCATCCATTACGATGCCTTTTTCTGCATCTAACTCTTTTTG‑TATTTTAACGGCGAATGAACGTACTgg                                            <  1:686559/100‑1 (MQ=255)
                                         aTCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGc                                           <  1:4572212/100‑1 (MQ=255)
                                          tCTGGTAGCACTTCAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTgggc                                          <  1:3211010/100‑3 (MQ=255)
                                          tCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGct                                          <  1:5084689/100‑1 (MQ=255)
                                          tCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGct                                          <  1:4488039/100‑1 (MQ=255)
                                           cTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGctg                                         <  1:2802329/100‑2 (MQ=255)
                                             ggTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCtt                                       <  1:2714505/100‑1 (MQ=255)
                                              gtggCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCttt                                      <  1:3753980/97‑1 (MQ=255)
                                              gTAGCGCTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCttt                                      <  1:5650846/100‑1 (MQ=255)
                                              gTAGCACTACAGTTTCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCttt                                      <  1:4815896/100‑1 (MQ=255)
                                              gTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATCCCTTTTTCTGCATCTAACTTTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCttt                                      <  1:5018007/100‑1 (MQ=255)
                                              gTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCttt                                      <  1:5612413/100‑1 (MQ=255)
                                              gTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCttt                                      <  1:3300734/100‑1 (MQ=255)
                                              gTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCttt                                      <  1:5520704/100‑1 (MQ=255)
                                              gTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCttt                                      <  1:1885150/100‑1 (MQ=255)
                                              gTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCttt                                      <  1:6075296/100‑1 (MQ=255)
                                              gTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCttt                                      <  1:1678287/100‑1 (MQ=255)
                                              gTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCttt                                      <  1:1550471/100‑1 (MQ=255)
                                              gTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCttt                                      <  1:1276514/100‑1 (MQ=255)
                                              gTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCttt                                      <  1:3613175/100‑1 (MQ=255)
                                              gTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCttt                                      <  1:1234535/100‑1 (MQ=255)
                                              gTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCttt                                      <  1:3703394/100‑1 (MQ=255)
                                              gTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCttt                                      <  1:3654178/100‑1 (MQ=255)
                                              gTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCttt                                      <  1:3787056/100‑1 (MQ=255)
                                              gTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCttt                                      <  1:3976011/100‑1 (MQ=255)
                                              gTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCttt                                      <  1:4318856/100‑1 (MQ=255)
                                              gTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCttt                                      <  1:2856884/100‑1 (MQ=255)
                                              gTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCttt                                      <  1:4496789/100‑1 (MQ=255)
                                              gTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCttt                                      <  1:4750428/100‑1 (MQ=255)
                                              gTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCttt                                      <  1:5170500/100‑1 (MQ=255)
                                              gTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCttt                                      <  1:2524292/100‑1 (MQ=255)
                                              gTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTCTTAACGGCGAATGAACGTACTGGCTCttt                                      <  1:2051290/100‑1 (MQ=255)
                                              gTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑ATTTTTAACGGCGAATGAACGTACTGGCTCttt                                      <  1:2383554/100‑1 (MQ=255)
                                               tAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCTTTa                                     <  1:4021833/100‑1 (MQ=255)
                                                aGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCTTTAg                                    <  1:5901003/100‑1 (MQ=255)
                                                aGCACTACAGTTCCGATATCGCGACCACCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCTTTAg                                    <  1:1384128/100‑1 (MQ=255)
                                                   aCTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTGTTAACGGCGAATGAACGTACTGGCTCTTTAGagg                                 <  1:6609232/100‑3 (MQ=255)
                                                    cTACAGTTCCGATATCGCGACCATCCATTACGATACCTTGTGCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCTTTAgggct                                <  1:1775585/100‑5 (MQ=255)
                                                     tACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCTTTAGATgaa                               <  1:786499/100‑3 (MQ=255)
                                                                    gcgACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCTTTAGATGCAACGTATGAAACATGt                <  1:2978332/100‑1 (MQ=255)
                                                                    gcgACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCTTTAGATGCAACGTATGAAACATGt                <  1:6140883/100‑1 (MQ=255)
                                                                     cgACCATCCATTACGATACCTTTTTCTGTATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCTTTAGATGCAACGTATGAAACATGta               <  1:5997803/100‑2 (MQ=255)
                                                                     cgACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCTTTAGATGCAACGTATGAAACATGtt               <  1:4383773/100‑1 (MQ=255)
                                                                     cgACCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCTTTAGATGCAACGTATGAAACATGtg               <  1:1287212/100‑2 (MQ=255)
                                                                       gccatccatTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCTTTAGATGCAACGTATGAAACATGTTGc             <  1:1807891/99‑1 (MQ=255)
                                                                       aCCATCCATTACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCTTTAGATGCAACGTATGAAACATGTTGc             <  1:3001802/100‑1 (MQ=255)
                                                                               ttACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCTTTAGATGCAACGTATGAAACATGTTGCGTCAcatc     <  1:6300932/100‑1 (MQ=255)
                                                                                tACGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCTTTAGATGCAACGTATGAAACATGTTGCGTCAcatca    <  1:486632/100‑1 (MQ=255)
                                                                                 aCGATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCTTTAGATGCAACGTATGAAACATGTTGCGTCAcatcag   <  1:6036557/100‑2 (MQ=255)
                                                                                  tgATACCTTTTTCTGCATCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCTTTAGATGCAACGTATGAAACATGTTGCGTCACATCatt  <  1:6498973/99‑1 (MQ=255)
                                                                                                   |                                                                                   
CGCTCTTCAACTGATGCAATCATATATACTTTTAAATCTGCATCTGGTAGCACTACAGTTCCGATATCGCGACCATCCATTACGATACCTTTTTCTGCAGCTAACTCTTTTTG‑TTTTTTAACGGCGAATGAACGTACTGGCTCTTTAGATGCAACGTATGAAACATGTTGCGTCACATCATT  >  NC_007793/1534073‑1534254

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑