D3A :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,533,003	A→G	L49L (TTA→CTA)	SAUSA300_RS07445 ←	30S ribosomal protein S1

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,533,003	0	A	G	99.8%	1215.6 / NA	452	L49L (TTA→CTA)	SAUSA300_RS07445	30S ribosomal protein S1
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (4/447); minor base T (0/1); total (4/448)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 452 total aligned reads displayed.

CATCAAACTCAACTTTAGTGACATATGCTTCAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAATTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTGACTTTGTC  >  NC_007793/1532916‑1533099

   caAACTCAACTTTAGTGACATATGCTTCAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGaat                                                                                   <  1:1636056/100‑1 (MQ=255)

    aaaCTCAACTTTAGTGACATATGCTTCAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGaata                                                                                  <  1:1111589/100‑1 (MQ=255)

    aaaCTCAACTTTAGTGACATATGCTTCAACTTCGTCGCCCTCTTTTACAACTTCACTGGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGaata                                                                                  <  1:2222924/100‑1 (MQ=255)

         cAACTTTAGTGACATATGCTTCAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATccc                                                                             <  1:3116163/100‑1 (MQ=255)

         cAACTTTAGTGACATATGCTTCAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATccc                                                                             <  1:5779324/100‑1 (MQ=255)

           aCTTTAGTGACATATGCTTCAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCag                                                                           <  1:2025240/100‑2 (MQ=255)

           aCTTTAGTGACATATGCTTCAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCAt                                                                           <  1:6290997/100‑1 (MQ=255)

                       tatGCTTCAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTaccac                                                               <  1:5104286/100‑1 (MQ=255)

                         tGCTTCAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTaccaccc                                                             <  1:3544136/100‑2 (MQ=255)

                          gCTTCAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGt                                                            <  1:5320024/100‑1 (MQ=255)

                           cTTCAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGtt                                                           <  1:4041312/100‑1 (MQ=255)

                            ttCAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTg                                                          <  1:2784566/100‑1 (MQ=255)

                            ttCAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTg                                                          <  1:6629029/100‑1 (MQ=255)

                            ttCAACTTCGTCGCCCTCTTCTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTg                                                          <  1:5372183/100‑1 (MQ=255)

                             tCAACTTCGTCGCCTTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTTGATATTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGa                                                         <  1:4948862/100‑1 (MQ=255)

                              cAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGat                                                        <  1:612870/100‑1 (MQ=255)

                               aaCTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTgcca                                                       <  1:2871226/100‑4 (MQ=255)

                                 ccgatctgCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATg                                                     <  1:427234/93‑1 (MQ=255)

                                 cTTCGACGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATg                                                     <  1:4635364/100‑1 (MQ=255)

                                  ttCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATgc                                                    <  1:379165/100‑2 (MQ=255)

                                     gtcgCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGaaca                                                 <  1:746842/100‑1 (MQ=255)

                                     atctctctctTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCAGTAAATTTACCACCGTTGATATGaaca                                                 <  1:5848190/94‑1 (MQ=255)

                                      tcgCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGaacag                                                <  1:5525501/100‑2 (MQ=255)

                                         cccTCTTTTACAGCTTCACTTGGTCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTGCCTCCGTTGATATGgacaaggc                                             <  1:5895029/100‑4 (MQ=255)

                                           ctctTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAAct                                           <  1:285043/100‑1 (MQ=255)

                                                ttACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAActtgctt                                      <  1:3587699/100‑1 (MQ=255)

                                                 tACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTTCCACCGTTGATATGAACAACAActtgcttg                                     <  1:6513968/100‑1 (MQ=255)

                                                 tACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAActtgcttg                                     <  1:5622641/100‑1 (MQ=255)

                                                  tcttccgatcTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGt                                    <  1:2261418/91‑1 (MQ=255)

                                                                gCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTtgttgt                      <  1:3325263/100‑1 (MQ=255)

                                                                       atatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCtgcc               <  1:5723859/100‑4 (MQ=255)

                                                                       atatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGc               <  1:1544229/100‑1 (MQ=255)

                                                                        tatGATGCGTAGGTAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:2063305/100‑1 (MQ=255)

                                                                        tatGATGCGTAGATAGTTGACTAATAGGCATAATCCCATTAAATTTACCACCCTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:3035816/100‑1 (MQ=255)

                                                                        tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTGCCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:859584/100‑1 (MQ=255)

                                                                        tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCGCCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:4509742/100‑1 (MQ=255)

                                                                        tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTTAACTTGTTGTACCTCGct              <  1:6541713/100‑2 (MQ=255)

                                                                        tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTTCCTCGcc              <  1:6460672/100‑1 (MQ=255)

                                                                        tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:6353770/100‑1 (MQ=255)

                                                                        tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:5336811/100‑1 (MQ=255)

                                                                        tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:672790/100‑1 (MQ=255)

                                                                        tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:500970/100‑1 (MQ=255)

                                                                        tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:4827037/100‑1 (MQ=255)

                                                                        tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:4656767/100‑1 (MQ=255)

                                                                        tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:2511752/100‑1 (MQ=255)

                                                                        tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:1316390/100‑1 (MQ=255)

                                                                        tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:4156695/100‑1 (MQ=255)

                                                                        tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:3914561/100‑1 (MQ=255)

                                                                        tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:3278808/100‑1 (MQ=255)

                                                                        tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:1081984/100‑1 (MQ=255)

                                                                         atgatgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCa             <  1:3629295/100‑1 (MQ=255)

                                                                         atgatgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCa             <  1:4884963/100‑1 (MQ=255)

                                                                          tgatgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAg            <  1:1022580/100‑1 (MQ=255)

                                                                          tgatgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAg            <  1:14974/100‑1 (MQ=255)

                                                                          tgatgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAg            <  1:3616643/100‑1 (MQ=255)

                                                                           gatgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAgc           <  1:2996275/100‑2 (MQ=255)

                                                                           gatgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAga           <  1:1347093/100‑2 (MQ=255)

                                                                           gatgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGt           <  1:2306222/100‑1 (MQ=255)

                                                                           gatgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGt           <  1:6116763/100‑1 (MQ=255)

                                                                           gatgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGt           <  1:2408693/100‑1 (MQ=255)

                                                                           gatgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGt           <  1:5811119/100‑1 (MQ=255)

                                                                            atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTCCCACCGTTGATATGAACACCAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:5204689/100‑1 (MQ=255)

                                                                            atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCGCCGTTGATATGAGCAACAACTTGCTTGTCTTCAACTTGTTGTGCCTCGCCAGta          <  1:1871646/100‑2 (MQ=255)

                                                                            atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCGCCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGta          <  1:1773138/100‑2 (MQ=255)

                                                                            atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTCCCTCGCCAGTg          <  1:5400722/100‑1 (MQ=255)

                                                                            atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAgaa          <  1:3731774/100‑3 (MQ=255)

                                                                            atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGtt          <  1:1729183/100‑2 (MQ=255)

                                                                            atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:5944431/100‑1 (MQ=255)

                                                                            atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:6020646/100‑1 (MQ=255)

                                                                            atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:6069655/100‑1 (MQ=255)

                                                                            atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:1656155/100‑1 (MQ=255)

                                                                            atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:3479188/100‑1 (MQ=255)

                                                                            atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:619055/100‑1 (MQ=255)

                                                                            atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:118147/100‑1 (MQ=255)

                                                                            atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:5491442/100‑1 (MQ=255)

                                                                            atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:1984457/100‑1 (MQ=255)

                                                                            atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:2376149/100‑1 (MQ=255)

                                                                            atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:4755675/100‑1 (MQ=255)

                                                                            atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:47268/100‑1 (MQ=255)

                                                                            atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:2630194/100‑1 (MQ=255)

                                                                            atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:1928069/100‑1 (MQ=255)

                                                                            atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:4418468/100‑1 (MQ=255)

                                                                            atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:4344227/100‑1 (MQ=255)

                                                                            atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:27270/100‑1 (MQ=255)

                                                                            atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:277089/100‑1 (MQ=255)

                                                                            atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:383402/100‑1 (MQ=255)

                                                                            atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:2963878/100‑1 (MQ=255)

                                                                            atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:3382966/100‑1 (MQ=255)

                                                                            atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATGTACCACCGTTGATATTAACAACAACTTGCTTGACTTCAACTTGTTGTACCTCGCCAGTg          <  1:244114/100‑1 (MQ=255)

                                                                             tgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTGa         <  1:448706/100‑1 (MQ=255)

                                                                              gCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTGag        <  1:4197467/100‑2 (MQ=255)

                                                                              gCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTGag        <  1:5455387/100‑2 (MQ=255)

                                                                               cGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTgggg       <  1:815899/100‑4 (MQ=255)

                                                                               cGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTgccg       <  1:6390396/100‑4 (MQ=255)

                                                                               cGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTGACt       <  1:5962173/100‑1 (MQ=255)

                                                                                gTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTGACtt      <  1:5574898/100‑1 (MQ=255)

                                                                                gTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTGACtt      <  1:88315/100‑1 (MQ=255)

                                                                                  aGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTGACTTTg    <  1:3156880/100‑1 (MQ=255)

                                                                                   gATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTGACTTTgg   <  1:5156187/100‑2 (MQ=255)

                                                                                   gATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTGACTTTGt   <  1:2541331/100‑1 (MQ=255)

CATCAAACTCAACTTTAGTGACATATGCTTCAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAATTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTGACTTTGTC  >  NC_007793/1532916‑1533099

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`