Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,520,645	C→T	E247K (GAA→AAA)	SAUSA300_RS07380 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,520,645	0	C	T	97.4%	205.5 / ‑1.5	77	coding (739/1245 nt)	SAUSA300_RS07380	hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base T (3/72);  minor base . (0/2);  total (3/74)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.15e-01

CATCCAGTTGTATACATTAACTCTTTATAAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTCATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTAATTGCTTCTTGAGTGAT  >  NC_007793/1520557‑1520741                                                                                          |                                                                                                 cATCCAGTTGTATACATTAACTCTTTATAAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAATTTTTTTTTATTTTCatat                                                                                        <  1:5101662/100‑1 (MQ=255)   tCCAGCTGTATACATTAACTCTTTATAAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAAt                                                                                     >  1:2655352/1‑100 (MQ=255)         tGTATACATTAACTCTATATAAAAATGACTTAGTCGTAATCCTTCTTTACCCGTTACAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGt                                                                               <  1:2140695/100‑1 (MQ=255)          gTATACATTAACTGTTTATAAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCAACTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTa                                                                              <  1:1357625/100‑1 (MQ=255)          gTATACATTAACTCTTTATAAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTa                                                                              <  1:6580834/100‑1 (MQ=255)          gTATACACTAACTTTTTATAAAATTGTCTTATTCGTAATTCTTCATTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTa                                                                              <  1:297799/100‑1 (MQ=255)           tataCATTAACTCTTTATAAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTac                                                                             <  1:4519663/100‑2 (MQ=255)                 ttAACTCTTTATAAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACaa                                                                       <  1:1127008/100‑1 (MQ=255)                  tAACTCTTTATAAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAg                                                                      <  1:3958847/100‑1 (MQ=255)                   aaCTCTTTATAAAATTGGCTTAGTCGTAGTCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGt                                                                     <  1:1647886/100‑1 (MQ=255)                   aaCTCTTTATAAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAgg                                                                     <  1:5315786/100‑2 (MQ=255)                   aaCTCTTTATAAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGt                                                                     <  1:5163729/100‑1 (MQ=255)                   aaCTCTTTATAAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGt                                                                     <  1:6546281/100‑1 (MQ=255)                   aaCTCTTTATAAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGt                                                                     <  1:2266599/100‑1 (MQ=255)                   aaCTCTTTATAAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGt                                                                     <  1:239463/100‑1 (MQ=255)                   aaCTCTTTATAAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGt                                                                     <  1:4153392/100‑1 (MQ=255)                      tctTTATAAAATTGACTTAGTCGTAATCCTTCTTTATCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGc                                                                  <  1:2810116/100‑1 (MQ=255)                      tctTTATAAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGc                                                                  <  1:6215395/100‑1 (MQ=255)                      tctTTATAAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGc                                                                  <  1:1521652/100‑1 (MQ=255)                       ctTTATAAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGcc                                                                 <  1:3452489/100‑1 (MQ=255)                       ctTTATAAAATTGACTTAGTCGTAATCCGTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGcc                                                                 <  1:6082287/100‑1 (MQ=255)                        tttATAAAATTGACTTAGTCGTATTCCTTCTTTGCCCGTTTCAATGGCATCTGGATAA‑TTTTTTT‑ATTTTCATATAATGATTGTAAATACAAGTAGCCtt                                                               <  1:6596978/100‑1 (MQ=255)                        tttATAAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCt                                                                <  1:5195806/100‑1 (MQ=255)                         ttATAAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCtc                                                               <  1:712617/100‑2 (MQ=255)                          tataAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTg                                                              <  1:590242/100‑1 (MQ=255)                           ataAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTgt                                                             <  1:148211/100‑2 (MQ=255)                           ataAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTgc                                                             <  1:868376/100‑2 (MQ=255)                           ataAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTgc                                                             <  1:6634925/100‑2 (MQ=255)                           ataAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGa                                                             <  1:4285162/100‑1 (MQ=255)                           ataAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGa                                                             <  1:4115476/100‑1 (MQ=255)                                   gACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATc                                                     <  1:2213175/100‑1 (MQ=255)                                   gACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATc                                                     <  1:3713832/100‑1 (MQ=255)                                   gACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATCTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATc                                                     <  1:346817/100‑1 (MQ=255)                                    aCTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCa                                                    <  1:6479865/100‑1 (MQ=255)                                      ttAGTCGTAGTCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAgg                                                  <  1:2063416/100‑1 (MQ=255)                                      ttAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAgg                                                  <  1:6008349/100‑1 (MQ=255)                                      ttAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAgg                                                  <  1:302899/100‑1 (MQ=255)                                      ttAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAgg                                                  <  1:6639890/100‑1 (MQ=255)                                        aGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGAt                                                <  1:1447075/100‑1 (MQ=255)                                            gTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCttt                                            <  1:483331/100‑1 (MQ=255)                                            gTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCttt                                            <  1:286748/100‑1 (MQ=255)                                             tAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAATTTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCttt                                            <  1:4079964/100‑1 (MQ=255)                                                     cattACCCGTTTCAATGGCATTTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAgggcgcgc                                   <  1:6092788/98‑8 (MQ=255)                                                      tttACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAAt                                  <  1:3767117/100‑1 (MQ=255)                                                        tatccGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCGTTAGAAAGTAATGt                                <  1:6088335/97‑1 (MQ=255)                                                        tACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATgg                                <  1:5181871/100‑2 (MQ=255)                                                        tACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGt                                <  1:5139563/100‑1 (MQ=255)                                                        tACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGt                                <  1:571744/100‑1 (MQ=255)                                                        tACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGt                                <  1:105184/100‑1 (MQ=255)                                                        tACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGt                                <  1:4324383/100‑1 (MQ=255)                                                        tACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGt                                <  1:15930/100‑1 (MQ=255)                                                        tACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTTAATTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGt                                <  1:303960/100‑1 (MQ=255)                                                         aCCCGTTTCAATGGCATCTGGATAATTTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGt                                <  1:6229089/100‑1 (MQ=255)                                                            cggtctagtGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAAAATAATCAGGATCTTTAGAAAGTAATGTAGTc                            <  1:405585/92‑1 (MQ=255)                                                            cGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTc                            <  1:1005511/100‑1 (MQ=255)                                                            cGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTc                            <  1:6074898/100‑1 (MQ=255)                                                            cGTTTCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAACGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAggg                            <  1:923885/100‑3 (MQ=255)                                                              tttCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCat                          <  1:2838437/100‑1 (MQ=255)                                                               ttCAATGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGACCTTTAGAAAGTAATGTAGTCatt                         <  1:5477205/100‑1 (MQ=255)                                                                  aaTGGCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCattatt                      >  1:1052039/1‑100 (MQ=255)                                                                     ggCATCTGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTa                   >  1:4005376/1‑100 (MQ=255)                                                                           tGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATGTAATCAGGATCGTTAGAAAGTAATGTAGTCATTATTTTAATTGct             <  1:3365705/100‑1 (MQ=255)                                                                           tGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTAATTGct             <  1:5957559/100‑1 (MQ=255)                                                                           tGGATAA‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTGTAGAAAGTAATGTAGTCATTATTTTAATTGct             <  1:1506160/100‑1 (MQ=255)                                                                               tAA‑TTTTTTT‑ATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTAATTGCTTCTTg        <  1:5897759/100‑1 (MQ=255)                                                                                aa‑TTTTTTTTATTTTCATATAATGATTGTAAATTCAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTAATTGCTTCTTg        <  1:4577958/100‑1 (MQ=255)                                                                                aa‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTAATTGCTTCTTg        <  1:6295730/100‑1 (MQ=255)                                                                                aa‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTAATTGCTTCTTg        <  1:4358064/100‑1 (MQ=255)                                                                                aa‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTAATTGCTTCTTg        <  1:6081430/100‑1 (MQ=255)                                                                                aa‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTAATTGCTTCTTg        <  1:1328130/100‑1 (MQ=255)                                                                                aa‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTAATTGCTTCTTg        <  1:3300698/100‑1 (MQ=255)                                                                                aa‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTAATTGCTTCTTg        <  1:4661945/100‑1 (MQ=255)                                                                                aa‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTAATTGCTTCTTg        <  1:3450228/100‑1 (MQ=255)                                                                                aa‑TTTTTTTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGCAGTCATTATTTTAATTGCTTCTTg        <  1:2173693/100‑1 (MQ=255)                                                                                aa‑TTTTTTTTATTTGCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTAATTGCTTCTTg        <  1:5000743/100‑1 (MQ=255)                                                                                aa‑TTTTTGTTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTAATTGCTTCTTg        <  1:1401148/100‑1 (MQ=255)                                                                                   ttttttttATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAGAATAGTGTAGTCATTATTTTAATTGCTTCTTGAg      <  1:6602773/100‑1 (MQ=255)                                                                                   ttttttttATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTAATTGCTTCTTGAg      <  1:5452872/100‑1 (MQ=255)                                                                                   ttttttttATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCGTTAGAAAGTAATGTAGTCATTATTTTAATTGCTTCTTGAg      <  1:5863992/100‑1 (MQ=255)                                                                                    ttttttTATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTAATTGCTTCTTGAGt     <  1:1491289/100‑1 (MQ=255)                                                                                     ttttttATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTAATTGCTTCTTGAgga    <  1:3071022/100‑3 (MQ=255)                                                                                     ttttttATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTAATTGCTTCTTGAGtt    <  1:231363/100‑2 (MQ=255)                                                                                     ttttttATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTAATTGCTTCTTGAGtc    <  1:684728/100‑2 (MQ=255)                                                                                     ttttttATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTAATTGCTTCTTGAGTg    <  1:6360944/100‑1 (MQ=255)                                                                                     ttttttATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTAATTGCTTCTTGAGTg    <  1:636888/100‑1 (MQ=255)                                                                                     ttttttATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTAATTGCTTCTTGAGTg    <  1:2327845/100‑1 (MQ=255)                                                                                     ttttttATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTAATTGCTTCTTGAGTg    <  1:1781707/100‑1 (MQ=255)                                                                                     ttttttATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTAATTGCTTCTTGAGTg    <  1:1215103/100‑1 (MQ=255)                                                                                     ttttttATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTAATTGCTTCTTGAGTg    <  1:1835415/100‑1 (MQ=255)                                                                                     ttttttATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTAAGTGCTTCTTGAGTg    <  1:4851087/100‑1 (MQ=255)                                                                                      tttttattttcaTATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTAATTGCTTCTTGAGTgg   <  1:2962559/100‑2 (MQ=255)                                                                                       ttttattttcatATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTAATTGCTTCTTGAGTgcc  <  1:3507951/100‑3 (MQ=255)                                                                                          |                                                                                                 CATCCAGTTGTATACATTAACTCTTTATAAAATTGACTTAGTCGTAATCCTTCTTTACCCGTTTCAATGGCATCTGGATAA‑TTTTTTTCATTTTCATATAATGATTGTAAATACAAGTAGCCTTGAATATAATCAGGATCTTTAGAAAGTAATGTAGTCATTATTTTAATTGCTTCTTGAGTGAT  >  NC_007793/1520557‑1520741

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑