D3A :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,453,835	T→C	T178A (ACT→GCT)	SAUSA300_RS07200 ←	virulence factor C

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,453,835	0	T	C	100.0%	544.9 / NA	193	T178A (ACT→GCT)	SAUSA300_RS07200	virulence factor C
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (1/192); total (1/192)

Only 100 of 204 total aligned reads displayed.

AAAGAGACATGTCGATAGAAATGATAATTATTAGTTGCGTGATTTTCTTCTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGTTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGATTTCCTAAATCTAGCCATTTACGCATAAAAACAATATTGTCATG  >  NC_007793/1453738‑1453931

aaaGAGACATGTCGATAGAAATGATAATTATTAGTTGCGTGATTTTCTTCTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTa                                                                                                <  1:6271929/100‑1 (MQ=255)

 aaGAGACATGTCGATAGAAATGATAATTATTAGTTGCGTGATTTTCTTCTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAg                                                                                               <  1:2217042/100‑1 (MQ=255)

  agagACATGTCGATAGAAATGATAATTATTAGTTGCGTGATTTTCTTCTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGtagctagc                                                                                              <  1:5153525/100‑1 (MQ=255)

  agagACATGTCGATAGAAATGATAATTATTAGTTGCGTGATTTTCTTCTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGtagctagc                                                                                              <  1:4205373/100‑1 (MQ=255)

  agagACATGTCGATAGAAATGATAATTATTAGTTGCGTGATTTTCTTCTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAgg                                                                                              <  1:732650/100‑2 (MQ=255)

   gagaCATGTCGATAGAAATGATAATTATTAGTTGCGTGATTTTCTTCTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGtagctagct                                                                                             <  1:662419/100‑2 (MQ=255)

   gagaCATGTCGATAGAAATGATAATTATTAGTTGCGTGATTTTCTTCTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCa                                                                                             <  1:557644/100‑1 (MQ=255)

           tCGATAGAAATGATAATTATTAGTTGCGTGATTTTCTTCTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTtcatct                                                                                     <  1:149224/100‑1 (MQ=255)

              aTAGAAATGATAATTATTAGTTGCGTGATTTTCTTCTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAgg                                                                                  <  1:3118819/100‑1 (MQ=255)

              aTAGAAATGATAATTATTAGTTGCGTGATTTTCTTCTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAgg                                                                                  <  1:5858423/100‑1 (MQ=255)

              aTAGAAATGATAATTATTAGTTGCGTGATTTTCTTCTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAgg                                                                                  <  1:1814558/100‑1 (MQ=255)

              aTAGAAATGATAATTATTAGTTGCGTGATTTTCTTCTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAgg                                                                                  <  1:1712174/100‑1 (MQ=255)

              aTAGAAATGATAATTATTAGTTGCGTGATTTTCTTCTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTGCTAgg                                                                                  <  1:6064689/100‑1 (MQ=255)

              aTAGAAATGATAATTATTAGTTGCGTGATGTTCTTCTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAgg                                                                                  <  1:4521848/100‑1 (MQ=255)

                 gAAATGATAATTATTAGTTGCGTGATTTTCTTCTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGata                                                                               <  1:1719432/100‑3 (MQ=255)

                   aaTGATAATTATTAGTTGCGTGATTTTCTTCTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACAcc                                                                             <  1:1100437/100‑1 (MQ=255)

                   aaTGATAATTATTAGTTGCGTGATTTTCTTCTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACAcc                                                                             <  1:4941231/100‑1 (MQ=255)

                   aaTGATAATTATTAGTTGCGTGATTTTCTTCTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACAcc                                                                             <  1:3931063/100‑1 (MQ=255)

                   aaTGATAATTATTAGTTGCGTGATTTTCTTCTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACAcc                                                                             <  1:4048455/100‑1 (MQ=255)

                   aaTGATAATTATTAGTTGCGTGATTTTCTTCTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACAcc                                                                             <  1:4421085/100‑1 (MQ=255)

                    aTGATAATTATTAGTTGCGTGATTTTCTTCTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACAcca                                                                            <  1:208360/100‑1 (MQ=255)

                    aTGATAATTATTAGTTGCGTGATTTTCTTCTAAAGCATGTATTACCAATACGAGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACAcca                                                                            <  1:3690550/100‑1 (MQ=255)

                     tGATAATTATTAGTTGCGTGATTTTCTTCTAAAGCATGTTTTGCCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACAccac                                                                           <  1:1992952/100‑2 (MQ=255)

                     tGATAATTATTAGTTGCGTGATTTTCTTCTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACAccag                                                                           <  1:6211633/100‑2 (MQ=255)

                             attaGTTGCGTGATTTTCTTCTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTAct                                                                   <  1:6202720/100‑1 (MQ=255)

                                  ttGCGTGATTTTCTTCTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTg                                                              <  1:4471747/100‑1 (MQ=255)

                                  ttGCGTGATTTTCTTCTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTg                                                              <  1:3001120/100‑1 (MQ=255)

                                     cGTGATTTTCTTCTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAat                                                           <  1:5816977/100‑1 (MQ=255)

                                            ttcttcTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAataggggcc                                                    <  1:3435409/100‑7 (MQ=255)

                                             tcttctAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTGGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCAt                                                   <  1:1555961/100‑1 (MQ=255)

                                             tcttctAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCAt                                                   <  1:5989381/100‑1 (MQ=255)

                                               ttctAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACGCCATCCATTACTTCTTGAATATTTCCATAg                                                 <  1:6387629/100‑1 (MQ=255)

                                               ttctAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAg                                                 <  1:4004478/100‑1 (MQ=255)

                                               ttctAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAg                                                 <  1:3338519/100‑1 (MQ=255)

                                               ttctAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAg                                                 <  1:3317133/100‑1 (MQ=255)

                                               ttctAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAg                                                 <  1:2306331/100‑1 (MQ=255)

                                               ttctAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAg                                                 <  1:1905703/100‑1 (MQ=255)

                                               ttctAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAg                                                 <  1:618959/100‑1 (MQ=255)

                                               ttctAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAg                                                 <  1:2699402/100‑1 (MQ=255)

                                               ttctAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTATTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAg                                                 <  1:5359285/100‑1 (MQ=255)

                                               ccgatctgCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAg                                                 <  1:1426440/93‑1 (MQ=255)

                                               atctAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAg                                                 <  1:5131122/99‑1 (MQ=255)

                                                 gatctgCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCTATTACTTCTTGAATATTTCCATAGCg                                               <  1:3752007/95‑1 (MQ=255)

                                                 gatctgCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCg                                               <  1:1843079/95‑1 (MQ=255)

                                                 ctAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCg                                               <  1:2882725/100‑1 (MQ=255)

                                                 ctAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCg                                               <  1:262867/100‑1 (MQ=255)

                                                 ctAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCg                                               <  1:6152266/100‑1 (MQ=255)

                                                 ctAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCg                                               <  1:3177016/100‑1 (MQ=255)

                                                  tAAAGCATGTTTTACCAATACGGGTAACTGTGGTTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCgt                                              <  1:48676/100‑2 (MQ=255)

                                                  tAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCgg                                              <  1:5679997/100‑2 (MQ=255)

                                                  ctaaGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCgg                                              <  1:6130268/98‑2 (MQ=255)

                                                   tctgCATGTTTTACCAATGCGGGTAACTGTGATTCTGGATGGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGAt                                             <  1:357364/97‑1 (MQ=255)

                                                   gaaGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTGGAATATTTCCATAGCGaa                                             <  1:2460901/99‑2 (MQ=255)

                                                   caaGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACCCCATCCATTACTTCTTGAATATTTCCATAGCGAt                                             <  1:4077485/99‑1 (MQ=255)

                                                   aaaGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACTCCATCCTTTACTTCTTGAATATTTCCATAGCGAt                                             <  1:2826147/100‑1 (MQ=255)

                                                   aaaGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAGTATTTCCATAGCGAt                                             <  1:6546659/100‑1 (MQ=255)

                                                   aaaGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATATCGAt                                             <  1:3082332/100‑1 (MQ=255)

                                                   aaaGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGaa                                             <  1:4357549/100‑2 (MQ=255)

                                                   aaaGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGAt                                             <  1:413098/100‑1 (MQ=255)

                                                   aaaGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGAt                                             <  1:2240275/100‑1 (MQ=255)

                                                   aaaGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGAt                                             <  1:1642472/100‑1 (MQ=255)

                                                   aaaGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGAt                                             <  1:2565274/100‑1 (MQ=255)

                                                   aaaGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGAt                                             <  1:3851098/100‑1 (MQ=255)

                                                   aaaGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGAt                                             <  1:3042793/100‑1 (MQ=255)

                                                   aaaGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGAt                                             <  1:3287086/100‑1 (MQ=255)

                                                   aaaGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGCAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCggt                                             <  1:4734343/100‑3 (MQ=255)

                                                    ctgcgtGTTTTACCAATACGGGTATCTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGAtg                                            <  1:137198/95‑2 (MQ=255)

                                                    aaGCCTGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGGCACCATCCATTACTTCTTGAATATTTCCATAGCGAta                                            <  1:5068455/100‑2 (MQ=255)

                                                    aaGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACTCCATCCATTACTTCTTGAATATTTCCATAGCGAtt                                            <  1:2971762/100‑1 (MQ=255)

                                                    aaGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGaag                                            <  1:5239054/100‑3 (MQ=255)

                                                    aaGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGAtt                                            <  1:2415673/100‑1 (MQ=255)

                                                    aaGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGAta                                            <  1:75061/100‑2 (MQ=255)

                                                    aaGCAGGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTGCTTGAATATTTCCATAGCGagg                                            <  1:6053654/100‑3 (MQ=255)

                                                     tgCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGAtta                                           <  1:3253185/99‑2 (MQ=255)

                                                     aGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCggcat                                           <  1:4781582/100‑5 (MQ=255)

                                                     aGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGAttt                                           <  1:2362161/100‑1 (MQ=255)

                                                     aGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGAttg                                           <  1:5093192/100‑2 (MQ=255)

                                                        aTGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGATTTCCt                                        <  1:1749168/100‑1 (MQ=255)

                                                         tGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGATTTCCTa                                       <  1:5114596/100‑1 (MQ=255)

                                                         tGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGATTTCCTa                                       <  1:3463998/100‑1 (MQ=255)

                                                          gTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGATTTCCTaa                                      <  1:45719/100‑1 (MQ=255)

                                                              tACCAATACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGATTTCCtcggaca                                  <  1:4625165/100‑7 (MQ=255)

                                                                  aaTACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGATTTCCTAAATCTAgtc                              <  1:3062082/100‑3 (MQ=255)

                                                                  aaTACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGATTTCCTAAATCTAGcc                              <  1:2535202/100‑1 (MQ=255)

                                                                  aaTACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGATTTCCTAAATCTAGcc                              <  1:5007322/100‑1 (MQ=255)

                                                                    tACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGATTTCCTAAATCTAGccgg                            <  1:5612424/100‑3 (MQ=255)

                                                                    tACGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGATTTCCTAAATCTAGCCac                            <  1:5210289/100‑2 (MQ=255)

                                                                     aCGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGATTTCCTAAATCTAGCCagg                           <  1:6257788/100‑3 (MQ=255)

                                                                     aCGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGATTTCCTAAATCTAGCCAtt                           >  1:6339361/1‑100 (MQ=255)

                                                                     aCGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGATTTCCTAAATCTAGCCAtg                           <  1:6598640/100‑2 (MQ=255)

                                                                     aCGGGTAACTGTGACTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGATTTCCTAAATCTAGCCagg                           <  1:4899442/100‑3 (MQ=255)

                                                                      cGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGATTTCCTAAATCTAGCCAttt                          <  1:2430411/100‑1 (MQ=255)

                                                                      cGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGATTTCCTAAATCTAGCCAttt                          <  1:5475950/100‑1 (MQ=255)

                                                                      cGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGATTTCCTAAATCTAGCCAttt                          <  1:1517998/100‑1 (MQ=255)

                                                                      cGGGTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGATTTCCTAAAGCTAGCCAttt                          <  1:3497333/100‑1 (MQ=255)

                                                                       gggTAACTGTGATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGATTTCCTAAATCTAGCCATTTa                         <  1:2767680/100‑1 (MQ=255)

                                                                              tgtgATTCTGGATAGGTAGCTAGCACTTCTTCTAGGGCACCATCCATTCCTTCTTGAATATTTCCATAACGATTTCCTAAATCTAGCCATTTACGCATag                  <  1:6072951/100‑2 (MQ=255)

                                                                               gtgATTCTGGATAGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGATTTCCTAAATCTAGCCATTTGCGCATact                 <  1:1871740/100‑3 (MQ=255)

                                                                                           aGGTAGCTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGATTTCCTAAATCTAGCCATTTACGCATAAAAACAATATTGTc     <  1:1305727/100‑1 (MQ=255)

                                                                                              tagctagcACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGATTTCCTAAATCTAGCCATTTACGCATAAAAACAATATTGTCAtg  <  1:6488262/100‑1 (MQ=255)

AAAGAGACATGTCGATAGAAATGATAATTATTAGTTGCGTGATTTTCTTCTAAAGCATGTTTTACCAATACGGGTAACTGTGATTCTGGATAGGTAGTTAGCACTTCTTCTAGGACACCATCCATTACTTCTTGAATATTTCCATAGCGATTTCCTAAATCTAGCCATTTACGCATAAAAACAATATTGTCATG  >  NC_007793/1453738‑1453931

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`