Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007793 1,442,893 T→C Y16C (TAT→TGT)  SAUSA300_RS07125 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077931,442,8930TC100.0% 282.0 / NA 105Y16C (TAT→TGT) SAUSA300_RS07125hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (101/4);  total (101/4)

Only 100 of 105 total aligned reads displayed.

GTAGTTGAAAATGATTATCAATACCATATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAA  >  NC_007793/1442867‑1442989
                          |                                                                                                
tgtgtggAAAATGATTATCAATACAACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATCGGTCATTTTCAAATATTCCCCTTTTATATGccc                         >  1:1134038/7‑100 (MQ=255)
 caattGAAAATGATTATCAATACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCg                        <  1:4669511/97‑1 (MQ=255)
  aggggAAAATGATTATCAATACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGt                       <  1:385334/96‑1 (MQ=255)
    ctGAAAATGATTATCAATACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGccccaag                     >  1:4823316/2‑96 (MQ=255)
    atGAAAATGATTATCAATACCACATAGAACATCCCCCCCACAACGTTTCGTTCTCGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCggag                     >  1:5936029/2‑97 (MQ=255)
     ggAAAATGATTATCAATACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTaaa                    <  1:1274289/99‑1 (MQ=255)
     cgAAAATGATTAAAAATACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTaaa                    <  1:4806227/99‑1 (MQ=255)
      gAAAATGATTATCAATACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTagat                   >  1:1009607/1‑97 (MQ=255)
        gcctGATTATCAATACCACATAGAACATCCCCCCCACAACGTTTTGTTCTTGCTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGa                 >  1:154586/4‑100 (MQ=255)
         caTGATTATCAATACCACATAGAACATCCCCCCCACAACGTTTCGATCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGAc                >  1:3595953/2‑100 (MQ=255)
         aaTGATTATCAATACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGcccagatcggaa                >  1:1180857/1‑91 (MQ=255)
         aaTGATTATCAATACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTagatcgg                >  1:1261625/1‑94 (MQ=255)
          aTGATTATCAATACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTaagatcgg               >  1:2363720/1‑94 (MQ=255)
            gATTATCAATACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGCCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGatcgg             >  1:4243832/1‑96 (MQ=255)
            gATTATCAATACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATGGGTCATTTTCAAATAGTCCCCTTTTATATGCCCGTagatcggaag             >  1:4121430/1‑91 (MQ=255)
            gATTATCAATACCACATAGAACATCCCCCCCACAACGATTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGatcgg             >  1:5105511/1‑96 (MQ=255)
               tATCAATACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCATAAAAGACAAtata          >  1:4937671/1‑100 (MQ=255)
                 gcAATACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGatcggaagag        >  1:3433065/2‑91 (MQ=255)
                  aagccccACATAGAACATCCCCCCCACAACGTTTCGTTCTTGCTGGATTGGCCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGt       >  1:2619226/6‑100 (MQ=255)
                   aaTACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTATAAGACAATATACGtt      >  1:4075510/1‑100 (MQ=255)
                   aaTACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGtt      >  1:1618225/1‑100 (MQ=255)
                    tgaCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTta     >  1:6406617/3‑100 (MQ=255)
                    ctACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTta     >  1:3343222/2‑100 (MQ=255)
                    ctACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCATAAAAGACAATATACGTta     >  1:1193332/2‑100 (MQ=255)
                    ccaCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAagatcggaag     >  1:2982026/3‑94 (MQ=255)
                    aTACCACATAGAACATCCCCCCCACAACTTTTCGTTCTTGTTGGATGGGTCATTTTCAACTATTCCCCTTTTATATGCCCGTAAAAGACaaattcggaag     >  1:5620841/1‑91 (MQ=255)
                    aTACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAGAAGACAATATACGTta     >  1:1913344/1‑100 (MQ=255)
                    aTACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAGGACAagatcggaag     >  1:4811276/1‑94 (MQ=255)
                    aTACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAGGACAATATACGTta     >  1:4973900/1‑100 (MQ=255)
                    aTACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTta     >  1:3643700/1‑100 (MQ=255)
                    aTACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTta     >  1:2765679/1‑100 (MQ=255)
                    aTACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTta     >  1:1131051/1‑100 (MQ=255)
                    aTACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTta     >  1:2628546/1‑100 (MQ=255)
                    aTACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTta     >  1:2615808/1‑100 (MQ=255)
                    aTACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTta     >  1:784351/1‑100 (MQ=255)
                    aTACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTta     >  1:2268486/1‑100 (MQ=255)
                    aTACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTta     >  1:2249718/1‑100 (MQ=255)
                    aTACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTta     >  1:217574/1‑100 (MQ=255)
                    aTACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTta     >  1:2079792/1‑100 (MQ=255)
                    aTACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTta     >  1:4040613/1‑100 (MQ=255)
                    aTACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTta     >  1:4111642/1‑100 (MQ=255)
                    aTACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTta     >  1:6030589/1‑100 (MQ=255)
                    aTACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATAAGCCCGTAAAAGACAATATACGTta     >  1:3334035/1‑100 (MQ=255)
                     tACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAagatcggaaga    >  1:1023490/1‑93 (MQ=255)
                     tACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtat    >  1:3401098/1‑100 (MQ=255)
                     tACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtat    >  1:5759847/1‑100 (MQ=255)
                     tACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtat    >  1:5801055/1‑100 (MQ=255)
                     tACCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtat    >  1:5964368/1‑100 (MQ=255)
                     tACCACATAGAACATCCCCCCCACAACGTTTCGCTCTTGTTGGATTGGTCATTTTCAAATATTACCCTTTTATATGCCCGTAAAAGACAATATACGGtat    >  1:1767265/1‑100 (MQ=255)
                     ctccACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtat    >  1:4318143/3‑100 (MQ=255)
                     caCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTTATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtat    >  1:5794866/2‑100 (MQ=255)
                     caCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCATTTTATATGCCCGTAAAAAACAATATACGTtat    >  1:4786874/2‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGCTTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:4010289/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTTCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:4493417/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTCAAAGACAATATACGTtata   >  1:2555976/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAACGACAATATACGTtata   >  1:660186/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:4655803/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:915478/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:6072048/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:6000654/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:5634011/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:5313962/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:5190782/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:2667402/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:1245873/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:1325721/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:1485266/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:1568220/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:1575435/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:167743/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:1740479/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:1884046/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:2193207/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:2349182/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:2416287/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:2457350/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:2735926/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:2880876/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:4575594/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:4181522/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:4179908/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:3662222/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:3838876/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:3856393/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:3955079/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGGCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:6291302/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGCCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:3203243/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTTGCTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:5273309/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGTTTCGTTCTAGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:6114722/1‑100 (MQ=255)
                      aCCACATAGAACATCCCCCCCACAACGCTTCGTTCTTGGTGGACTGGTCATTTTCAATTATTTCCCTTTTATATGCCCGTAAAAGACAATATACGTtata   >  1:5243751/1‑100 (MQ=255)
                       ccACATAGAACATCCCCCCCACAACTTTTCGTTCTTGTTGGATTGTTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATaa  >  1:4627149/1‑100 (MQ=255)
                       ccACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAagatcggaagagc  >  1:5642496/1‑91 (MQ=255)
                       ccACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATaa  >  1:3998046/1‑100 (MQ=255)
                       ccACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATaa  >  1:5064476/1‑100 (MQ=255)
                       ccACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATaa  >  1:5702725/1‑100 (MQ=255)
                       ccACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATaa  >  1:4690410/1‑100 (MQ=255)
                       ccACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATaa  >  1:6520917/1‑100 (MQ=255)
                       ccACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATaa  >  1:6546926/1‑100 (MQ=255)
                       ccACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATaa  >  1:4612444/1‑100 (MQ=255)
                       ccACATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATaa  >  1:316172/1‑100 (MQ=255)
                          |                                                                                                
GTAGTTGAAAATGATTATCAATACCATATAGAACATCCCCCCCACAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAA  >  NC_007793/1442867‑1442989

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑