Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,382,463	C→T	S337L (TCA→TTA)	SAUSA300_RS06820 →	phosphatidylglycerol lysyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,382,463	0	C	T	100.0%	26.7 / NA	11	S337L (TCA→TTA)	SAUSA300_RS06820	phosphatidylglycerol lysyltransferase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (11/0);  total (11/0)

TTGAGGGATCTAAATACTTTATTCCTGCTAAAGATGTTACGTCATTTTTAATGTCTTATCAAAAGGATATTATTGCTAAAATTCCATCATTATCATTAGCAATTTTAGTATTCTTTACAAGTATGATCTTTTTTGTAAATAACTTAACGATTGTTTA  >  NC_007793/1382370‑1382526                                                                                              |                                                                ttGAGGGATCTAAATACTTTATTCCTGCTAAAGATGTTACGTCGTTTTTAATGTCTTATCAAAAGGATATTATTGCTAAAATTCCATCATTATTATTAGc                                                           >  1:6249524/1‑100 (MQ=255)            aaaTACTTTATTCCTGCTAAAGATGTTACGTCATTTTTAATGTCTTATCAAAAGGATATTATTGCTAAAATTCCATCATTATTATTAGCAATTTTAGTAt                                                >  1:1699500/1‑100 (MQ=255)            aaaTACTTTATTCCTGCTAAAGATGTTACGTCATTTTTAATGTCTTATCAAAAGGATATTATTGCTAAAATTCCATCATTATTATTAGCAATTTTAGTAt                                                >  1:2361338/1‑100 (MQ=255)            aaaTACTTTATTCCTGCTAAAGATGTTACGTCATTTTTAATGTCTTATCAAAAGGATATTATTGCTAAAATTCCATCATTATTATTAGCAATTTTAGTAt                                                >  1:3161768/1‑100 (MQ=255)            aaaTACTTTATTCCTGCTAAAGATGTTACGTCATTTTTAATGTCTTATCAAAAGGATATTATTGCTAAAATTCCATCATTATTATTAGCAATTTTAGTAt                                                >  1:4329263/1‑100 (MQ=255)            aaaTACTTTATTCCTGCTAAAGATGTTACGTCATTTTTAATGTCTTATCAAAAGGATATTATTGCTAAAATTCCATCATTATTATTAGCAATTTTAGTAt                                                >  1:6314189/1‑100 (MQ=255)                     aTTCCTGCTAAAGATGTTACGTCATTTTTAATGTCTTATCAAAAGGATATTATTGCTAAAATTCCATCATTATTATTAGCAATTTTAGTATTCTTTACaa                                       >  1:4667643/1‑100 (MQ=255)                           gCTAAAGATGTTACGTCATTTTTAATGTCTTATCAAAAGGATATTATTGCTAAAATTCCATCATTATTATTAGCAATTTTAGTATTCTTTACAAGTATGa                                 >  1:3201398/1‑100 (MQ=255)                                                 caaTGTCTTATCAAAAGGATATTATTGCTAAAATTCCATCATTATTATTAGCAATTTTAGTATTCTTTACAAGTATGATCTTTTTTGTAAATAACTTAAc           >  1:5493154/2‑100 (MQ=255)                                                         tATCAAAAGGATATTATTGCTAAAATTCCATCATTATTATTAGCAATTTTAGTATTCTTTACAAGTATGATCTTTTTTGTAAATAACTTAACGATTGttt   >  1:3708020/1‑100 (MQ=255)                                                          aTCAAAAGGATATTATTGCTAAAATTCCATCATTATTATTAGCAATTTTAGTATTCTTTACAAGTATGATCTTTTTTGTAAATAACTTAACGATTGTTTa  >  1:228371/1‑100 (MQ=255)                                                                                              |                                                                TTGAGGGATCTAAATACTTTATTCCTGCTAAAGATGTTACGTCATTTTTAATGTCTTATCAAAAGGATATTATTGCTAAAATTCCATCATTATCATTAGCAATTTTAGTATTCTTTACAAGTATGATCTTTTTTGTAAATAACTTAACGATTGTTTA  >  NC_007793/1382370‑1382526

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑