Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,286,986	A→G	K222R (AAA→AGA)	SAUSA300_RS06325 →	cell division protein FtsK

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,286,986	0	A	G	100.0%	251.8 / NA	90	K222R (AAA→AGA)	SAUSA300_RS06325	cell division protein FtsK
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (90/0);  total (90/0)

GTTGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAAACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCAAT  >  NC_007793/1286889‑1287082                                                                                                   |                                                                                                 tttGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGAc                                                                                                >  1:2385036/2‑100 (MQ=255) tttGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGAc                                                                                                >  1:2140969/2‑100 (MQ=255) gctGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGCAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGAc                                                                                                >  1:5672738/3‑100 (MQ=255) gTTGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGAc                                                                                                >  1:1216504/1‑100 (MQ=255) gTTGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGAc                                                                                                >  1:2120551/1‑100 (MQ=255) cttGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTTATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGAc                                                                                                >  1:679622/2‑100 (MQ=255) cttGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGCAAAAATGTCGGAAAGAAACCAAG‑TAAAACAATTGAAGCGTGAAGAAAAAGCAAGAc                                                                                                >  1:4415834/2‑100 (MQ=255) cctGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGAc                                                                                                >  1:1550747/3‑100 (MQ=255) cctGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGAc                                                                                                >  1:5553369/3‑100 (MQ=255) cctGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGAc                                                                                                >  1:2803901/3‑100 (MQ=255)  ttGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACt                                                                                               >  1:454741/1‑100 (MQ=255)  ttGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACt                                                                                               >  1:6161254/1‑100 (MQ=255)   tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTACTGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACta                                                                                              >  1:2194826/1‑99 (MQ=255)   tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGGAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:3932158/1‑100 (MQ=255)   tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:806153/1‑100 (MQ=255)   tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:5494876/1‑100 (MQ=255)   tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:3735613/1‑100 (MQ=255)   tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:5822007/1‑100 (MQ=255)   tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:6016482/1‑100 (MQ=255)   tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:3093023/1‑100 (MQ=255)   tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:2560393/1‑100 (MQ=255)   tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:1899823/1‑100 (MQ=255)   tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:1467383/1‑100 (MQ=255)   tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:226141/1‑100 (MQ=255)   tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACta                                                                                              >  1:2373919/1‑99 (MQ=255)   tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAAAAAAAGCaaagatc                                                                                              >  1:4908319/1‑96 (MQ=255)   tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGAGTGAAGAAAAAGCAAGACtt                                                                                              >  1:4545150/1‑100 (MQ=255)    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtca                                                                                             >  1:968051/1‑98 (MQ=255)    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtag                                                                                             >  1:675351/1‑98 (MQ=255)    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtaa                                                                                             >  1:6384324/1‑98 (MQ=255)    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:2625991/1‑100 (MQ=255)    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:4499108/1‑100 (MQ=255)    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:1528710/1‑100 (MQ=255)    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:3715721/1‑100 (MQ=255)    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:3652998/1‑100 (MQ=255)    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:967013/1‑100 (MQ=255)    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:6306227/1‑100 (MQ=255)    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACAAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:5436614/1‑100 (MQ=255)    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATATCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:843581/1‑100 (MQ=255)     cACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtaag                                                                                            >  1:3831418/1‑97 (MQ=255)       cTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTaaaa                                                                                          >  1:4443167/1‑99 (MQ=255)         ggAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAaagaa                                                                                        >  1:5721914/1‑100 (MQ=255)         ggAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAaagaa                                                                                        >  1:6643176/1‑100 (MQ=255)         ggAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAaagaa                                                                                        >  1:6619078/1‑100 (MQ=255)         ggAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAaagaa                                                                                        >  1:4317577/1‑100 (MQ=255)         ggAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAaagaa                                                                                        >  1:3875131/1‑100 (MQ=255)         ggAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAaagaa                                                                                        >  1:4188733/1‑100 (MQ=255)         ggAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAaagaa                                                                                        >  1:2076780/1‑100 (MQ=255)         ggAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAaagaa                                                                                        >  1:2389643/1‑100 (MQ=255)         ggAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACAAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAaagaa                                                                                        >  1:5230402/1‑100 (MQ=255)                  aaaaGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACaaaa                                                                                >  1:4061066/1‑100 (MQ=255)                                   cATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACa                                                              >  1:565280/1‑100 (MQ=255)                                           gAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACaaa                                                      >  1:1351407/1‑100 (MQ=255)                                               aaaTGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATaaa                                                  >  1:1340359/1‑100 (MQ=255)                                                            aaaCCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGAt                                     >  1:1540150/1‑100 (MQ=255)                                                             ccccAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATgagagatcgg                                    >  1:6365387/3‑95 (MQ=255)                                                             aaCCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAGAGATGTGAGTGAtt                                    >  1:4827328/1‑100 (MQ=255)                                                              aCCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGAttt                                   >  1:3955858/1‑100 (MQ=255)                                                                  aG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACg                               >  1:5013968/1‑100 (MQ=255)                                                                      acggcAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGAGAGTGATTTTACGGaa                            >  1:3731821/5‑100 (MQ=255)                                                                        aaCAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGt                          >  1:3514757/1‑100 (MQ=255)                                                                          gtaTTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGc                        >  1:4513380/3‑100 (MQ=255)                                                                            gtgctaGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCt                      >  1:3943635/6‑100 (MQ=255)                                                                            cttGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCt                      >  1:2620396/2‑100 (MQ=255)                                                                            aTTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCt                      >  1:2895109/1‑100 (MQ=255)                                                                            aTTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCt                      >  1:3666475/1‑100 (MQ=255)                                                                            aTTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCt                      >  1:563422/1‑100 (MQ=255)                                                                             tttcaGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTc                     >  1:752078/5‑100 (MQ=255)                                                                              tGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCa                    >  1:700498/1‑100 (MQ=255)                                                                              tGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCa                    >  1:2546207/1‑100 (MQ=255)                                                                              tGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCa                    >  1:4871400/1‑100 (MQ=255)                                                                              tGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCa                    >  1:6163690/1‑100 (MQ=255)                                                                                ctgCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCaag                  >  1:417483/3‑100 (MQ=255)                                                                                         ccaaaaGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCaagaaagatcgg         >  1:6035726/3‑96 (MQ=255)                                                                                          taaaaGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGatat        >  1:3121027/2‑100 (MQ=255)                                                                                          taaaaGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGatat        >  1:3926793/2‑100 (MQ=255)                                                                                          taaaaGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGatat        >  1:2865536/2‑100 (MQ=255)                                                                                          caaaaGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGatcg        >  1:1172890/2‑98 (MQ=255)                                                                                          caaaaGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGatat        >  1:5760605/2‑100 (MQ=255)                                                                                          caaaaGCAAGACTTAAAGAAGAACAAAAGGCACGCCAAAATGAACAGCCACAAATAAAAGATGTGGGCGATTTTACGGAAGGGCCTCAAGCAAGAGatat        >  1:5474014/2‑100 (MQ=255)                                                                                          aaaaaGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGatat        >  1:5120484/1‑100 (MQ=255)                                                                                           aaaaGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCaagaaagaagatcg       >  1:1765225/1‑94 (MQ=255)                                                                                           aaaaGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATAtt       >  1:4202964/1‑100 (MQ=255)                                                                                            aaaGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGGTTTTACGGAAGTGCCTCAAGAAAGAGatcgga      >  1:6068336/1‑96 (MQ=255)                                                                                            aaaGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTc      >  1:985424/1‑100 (MQ=255)                                                                                            aaaGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTc      >  1:6601485/1‑100 (MQ=255)                                                                                               ccAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCaa   >  1:5463182/2‑100 (MQ=255)                                                                                               acAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAGATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGGAAGAGATATTCCaa   >  1:4791069/2‑100 (MQ=255)                                                                                                cAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCAAt  >  1:3517538/1‑100 (MQ=255)                                                                                                cAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCAAt  >  1:3266418/1‑100 (MQ=255)                                                                                                cAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCAAt  >  1:4323812/1‑100 (MQ=255)                                                                                                   |                                                                                                 GTTGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAG‑AAAAACAATTGAAGCGTGAAGAAAAAGCAAAACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCAAT  >  NC_007793/1286889‑1287082

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑