D3A :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,197,225	T→A	T233T (ACT→ACA)	SAUSA300_RS05930 →	dihydroorotase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,197,225	0	T	A	100.0%	538.1 / NA	197	T233T (ACT→ACA)	SAUSA300_RS05930	dihydroorotase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (190/7); total (190/7)

Only 100 of 206 total aligned reads displayed.

GGTATTCCAAACATTTGTGAATCTGTTCAAATCGCAAGAGATGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACTAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAGTTACACCACACCATTTATTGTTAACAGAAGATGAT  >  NC_007793/1197130‑1197321

      ccAAACATTTGTGAATCTGTTCAAATCGCAAGAGATGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAgtg                                                                                        >  1:108461/1‑100 (MQ=255)

      ccAAACATTTGTGAATCTGTTCAAATCGCAAGAGATGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAgtg                                                                                        >  1:6024449/1‑100 (MQ=255)

       cAAACATTTGTGAATCTGTTCAAATCGCAAGAGATGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAgtgt                                                                                       >  1:1574259/1‑100 (MQ=255)

              ttGTGAATCTGTTCAAATCGCAAGAGATGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTc                                                                                >  1:6301706/1‑100 (MQ=255)

              ttGTGAATCTGTTCAAATCGCAAGAGATGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTc                                                                                >  1:4736009/1‑100 (MQ=255)

              tagtgAATCTGTTCAAATCGCAAGAGATGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTc                                                                                >  1:3244305/3‑100 (MQ=255)

                    cacTGTTCAAATCGCAAGAGATGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGt                                                                          >  1:2124462/3‑100 (MQ=255)

                        gTTCAAATCGCAAGAGATGTGCTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACg                                                                      >  1:5525985/1‑100 (MQ=255)

                        gTTCAAATCGCAAGAGATGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACg                                                                      >  1:3081834/1‑100 (MQ=255)

                        gTTCAAATCGCAAGAGATGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACg                                                                      >  1:2752861/1‑100 (MQ=255)

                        gTTCAAATCGCAAGAGATGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACg                                                                      >  1:1949623/1‑100 (MQ=255)

                        attCAAATCGCAAGAGATGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACg                                                                      >  1:3793531/2‑100 (MQ=255)

                          gcAAATCGCAAGAGATGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCt                                                                    >  1:3803153/2‑100 (MQ=255)

                           cAAATCGCAAGAGATGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTa                                                                   >  1:166652/1‑100 (MQ=255)

                           cAAATCGCAAGAGATGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTa                                                                   >  1:4352305/1‑100 (MQ=255)

                            aaaTCGCAAGAGATGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTaa                                                                  >  1:6291084/1‑100 (MQ=255)

                             taTCGCAAGAGATGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTaaa                                                                 >  1:5189275/2‑100 (MQ=255)

                             aaTCGCAAGAGATGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTaaa                                                                 >  1:5568720/1‑100 (MQ=255)

                             aaTCGCAAGAGATGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTaaa                                                                 >  1:3336687/1‑100 (MQ=255)

                             aaTCGCAAGAGATGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTaaa                                                                 >  1:2248481/1‑100 (MQ=255)

                              gccGCAAGAGATGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAAc                                                                >  1:4859951/3‑100 (MQ=255)

                              cccGCAAGAGATGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAAc                                                                >  1:1630808/3‑100 (MQ=255)

                              aTCGCAAGAGATGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAAc                                                                >  1:6604487/1‑100 (MQ=255)

                                cGCAAGAGATGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAAcgc                                                              >  1:418820/1‑100 (MQ=255)

                                cGCAAGAGATGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAAcgc                                                              >  1:1587674/1‑100 (MQ=255)

                                      agaTGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGc                                                        >  1:4418144/1‑100 (MQ=255)

                                      agaTGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGc                                                        >  1:6520495/1‑100 (MQ=255)

                                       gaTGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCa                                                       >  1:3577294/1‑100 (MQ=255)

                                       gaTGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCa                                                       >  1:6421087/1‑100 (MQ=255)

                                       gaTGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCa                                                       >  1:5123395/1‑100 (MQ=255)

                                       cttGTACCATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCa                                                       >  1:4370693/3‑100 (MQ=255)

                                        ttGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCACTCGTGACGCTAAACGCGCAGGCAt                                                      >  1:2008247/2‑100 (MQ=255)

                                        ctGTACTATTCGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCCGGCAt                                                      >  1:6652938/2‑100 (MQ=255)

                                         tGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCAtt                                                     >  1:5402285/1‑100 (MQ=255)

                                         tGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCAtt                                                     >  1:3709113/1‑100 (MQ=255)

                                         tGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCAtt                                                     >  1:468324/1‑100 (MQ=255)

                                         cgTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCAtt                                                     >  1:1518268/2‑100 (MQ=255)

                                          gctcttcgatcTGAAGCGGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTc                                                    <  1:4049842/90‑1 (MQ=255)

                                          gTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTc                                                    >  1:3576343/1‑100 (MQ=255)

                                          gTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTc                                                    >  1:3821083/1‑100 (MQ=255)

                                          gTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTc                                                    >  1:2598315/1‑100 (MQ=255)

                                          gTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTc                                                    >  1:1188741/1‑100 (MQ=255)

                                          gTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTc                                                    >  1:817200/1‑100 (MQ=255)

                                          gTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTc                                                    >  1:5450417/1‑100 (MQ=255)

                                          gTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATCTCATGTTTCTACAAAAGAAAGTGATAGAGTCATTCGTGACGCTAAACGCGCAGGCATTc                                                    >  1:5887200/1‑100 (MQ=255)

                                           caCTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCa                                                   >  1:2898493/2‑100 (MQ=255)

                                            ccTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCAt                                                  >  1:3122504/2‑100 (MQ=255)

                                            aCTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCAt                                                  >  1:5516636/1‑100 (MQ=255)

                                                tactcTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTa                                              >  1:3865159/5‑100 (MQ=255)

                                                  aGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACa                                            >  1:5317184/1‑100 (MQ=255)

                                                     tGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTTTACAAAAGAAAGTGTTAGAGTCATTCGTGCCGCTAAACGCGCAGGCATTCATGTTACAGCt                                         >  1:1466168/1‑100 (MQ=255)

                                                     cttagcagcAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCt                                         >  1:2321484/4‑100 (MQ=255)

                                                     ccaaGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCt                                         >  1:4579121/3‑100 (MQ=255)

                                                      gAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTg                                        >  1:4133283/1‑100 (MQ=255)

                                                      gAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTg                                        >  1:184390/1‑100 (MQ=255)

                                                      gAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTg                                        >  1:2966900/1‑100 (MQ=255)

                                                      gAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCACTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTg                                        >  1:2434001/1‑100 (MQ=255)

                                                      ctggcagcaGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGCGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTg                                        >  1:5296115/4‑100 (MQ=255)

                                                       tagcagcAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGa                                       >  1:5812106/2‑100 (MQ=255)

                                                       tagcagcAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGa                                       >  1:622526/2‑100 (MQ=255)

                                                       cagcagcAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGa                                       >  1:5948124/2‑100 (MQ=255)

                                                       cagcagcAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGa                                       >  1:6084647/2‑100 (MQ=255)

                                                       aaGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGa                                       >  1:3253750/1‑100 (MQ=255)

                                                       aaGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGa                                       >  1:162585/1‑100 (MQ=255)

                                                        cgcagcaGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGaa                                      >  1:77482/2‑100 (MQ=255)

                                                        agcagcGGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGaa                                      >  1:4273047/1‑100 (MQ=255)

                                                        agcagcAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTTAATGCGCAGGCATTCATGTTACAGCTGaa                                      >  1:4498260/1‑100 (MQ=255)

                                                        agcagcAGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGaa                                      >  1:5143392/1‑100 (MQ=255)

                                                         gcagcaGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAg                                     >  1:3429144/1‑100 (MQ=255)

                                                         gcagcaGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAg                                     >  1:365433/1‑100 (MQ=255)

                                                         gcagcaGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAg                                     >  1:5220381/1‑100 (MQ=255)

                                                         gcagcaGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAg                                     >  1:3093534/1‑100 (MQ=255)

                                                         gcagcaGGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGCGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCCTGTTACAGCTGAAg                                     >  1:4804955/1‑100 (MQ=255)

                                                         ccagcagGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAg                                     >  1:2807791/2‑100 (MQ=255)

                                                          tagcagGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAGt                                    >  1:6441480/2‑100 (MQ=255)

                                                          ccccagGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAGt                                    >  1:54842/4‑100 (MQ=255)

                                                          cagcaaGGTGGCATGATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAGt                                    >  1:5689786/1‑100 (MQ=255)

                                                           tgcagGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAGtt                                   >  1:2150433/2‑100 (MQ=255)

                                                            gcagGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAGTTa                                  >  1:1975357/1‑100 (MQ=255)

                                                            gcagGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAGTTa                                  >  1:1026841/1‑100 (MQ=255)

                                                             cagGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAGTTac                                 >  1:4015545/1‑100 (MQ=255)

                                                             cagGTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAGTTac                                 >  1:1504749/1‑100 (MQ=255)

                                                               ggTTGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAGTTacac                               >  1:4606329/1‑100 (MQ=255)

                                                               gcttGTCATTATCATGTATGTCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAGTTacac                               >  1:2584960/3‑100 (MQ=255)

                                                                     ttgccccgtgtatgtCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAGTTacaccacacc                         >  1:3409884/9‑100 (MQ=255)

                                                                              ttatgtCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAGTTACACCACACCATTTATTGt                >  1:3181650/2‑100 (MQ=255)

                                                                              gtatgtCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAGTTACACCACACCATTTATTGt                >  1:850/1‑100 (MQ=255)

                                                                              gtatgtCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAGTTACACCACACCATTTATTGt                >  1:2293683/1‑100 (MQ=255)

                                                                                atgtCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAGTTACACCACACCATTTATTGTTa              >  1:1781558/1‑100 (MQ=255)

                                                                                  gtCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAGTTACACCACACCATTTATTGTTAAc            <  1:3854830/100‑1 (MQ=255)

                                                                                  gtCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAGTTACACCACACCATTTATTGTTAAc            <  1:4540393/100‑1 (MQ=255)

                                                                                  gtCATGTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAGTTACACCACACCATTTATTGTTAAc            <  1:5616840/100‑1 (MQ=255)

                                                                                       gTTTCTACAAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATACATGTTACAGCTGAAGTTACACCACGCCATTTATTGTTAACagaag       <  1:1101752/100‑1 (MQ=255)

                                                                                       cttgctacaaAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAGTTACACCACACCACTTATTGTTAACagaag       >  1:835091/5‑100 (MQ=255)

                                                                                          cttacaaATGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAGATACACCACACCATTTATTGTTAACAGAAgatg    >  1:6114495/3‑100 (MQ=255)

                                                                                           ctacaaAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAGTTACACCACACCATTTATTGTTATCAGGAgatcg   >  1:64923/1‑98 (MQ=255)

                                                                                           ctacaaAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAGTTACACCACACCATTTATTGTTAACAGAAgatcg   >  1:4650030/1‑98 (MQ=255)

                                                                                           ctacaaAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAGTTACACCACACCATTTATTGTTAACAGAAgatcg   >  1:1328862/1‑98 (MQ=255)

                                                                                           ctacaaAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATCCATGTTACAGCTGAAGTTACACCACACCATTTATTGTTAACAGAAgatga   >  1:125514/1‑100 (MQ=255)

                                                                                            tacaaAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAGTTACACCACACCATTTATTGTTAACAGAAgatcgg  >  1:1010814/1‑97 (MQ=255)

GGTATTCCAAACATTTGTGAATCTGTTCAAATCGCAAGAGATGTACTATTAGCTGAAGCAGCAGGTTGTCATTATCATGTATGTCATGTTTCTACTAAAGAAAGTGTTAGAGTCATTCGTGACGCTAAACGCGCAGGCATTCATGTTACAGCTGAAGTTACACCACACCATTTATTGTTAACAGAAGATGAT  >  NC_007793/1197130‑1197321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`