Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,154,397	C→G	intergenic (+200/‑354)	SAUSA300_RS05695 → / → SAUSA300_RS05700	fibrinogen‑binding protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,154,397	0	C	G	100.0%	29.6 / NA	13	intergenic (+200/‑354)	SAUSA300_RS05695/SAUSA300_RS05700	fibrinogen‑binding protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (3/10);  total (3/10)

AGGATTACTCTCAAAATAACTATATCAATTATTTACTTTGCTCTCCTATTTTTTAAAATATCTACATGTTTAAACAATCAAAAGTGTACAATATTAAATTATCATTTCCAGTTCTAGTGCTATATTGGTAGTAGTTGACTAAATGAAAAT  >  NC_007793/1154336‑1154485                                                              |                                                                                         aGGATTACTCTCAAAATAACTATATCAATTATTTACTTTGCTCTCCTATTTTTTAAAATATGTACATGTTTAAACAATCAAAAGTGTACAATATTAAAtt                                                    >  1:5576358/1‑100 (MQ=255)                aTAACTGTATCAATTATTTACTTTGCTCTCCTATTTTTTAAAATATGTACATGTTTAAACAATCAAAAGTGTACAATATTAAATTATCATTTCCAGTTCt                                     <  1:6064445/100‑1 (MQ=255)                aTAACTATATCAATTATTTACTTTGCTCTCCTATTTTTTAAGATATGTACATGTTTAAACAATCAAAAGTGTACAATATTAAATTATCATTTCCAGTTCt                                     <  1:1496110/100‑1 (MQ=255)                aTAACTATATCAATTATTTACTTTGCTCTCCTATTTTTTAAAATATGTACATGTTTAAACAATCAAAAGTGTACAATATTAAATTATCATTTCCAGTTCt                                     <  1:1713396/100‑1 (MQ=255)                aTAACTATATCAATTATTTACTTTGCTCTCCTATTTTTTAAAATATGTACATGTTTAAACAATCAAAAGTGTACAATATTAAATTATCATTTCCAGTTCt                                     <  1:4184531/100‑1 (MQ=255)                aTAACTATATCAATTATTTACTTTGCTCTCCTATTTTTTAAAATATGTACATGTTTAAACAATCAAAAGTGTACAATATTAAATTATCATTTCCAGTTCt                                     <  1:827944/100‑1 (MQ=255)                aTAACTATATCAATTATTTACCTTGCTCTCCTATTTTTTAAAATATGTACATGTTTAAACAATCAAAAGTGTACAATATTAAATTATCATTTCCAGTTCt                                     <  1:2570365/100‑1 (MQ=255)                   aCTATATCAATTATTTACTTTGCTCTCCTATTTTTTAAAATATGTACATGTTTAAACAATCAAAAGTGTACAATATTAAATTATCATTTCCAGTTCTAgg                                  <  1:3601845/100‑2 (MQ=255)                        atCAATTATTTACTTTGCTCTCCTATTTTTTAAAATATGTACATGTTTAAACAATCAAAAGTGTACAATATTAAATTATCATTTCCAGTTCTAGTGCtac                             <  1:2200566/100‑2 (MQ=255)                        atCAATTATTTACTTTGCTCTCCTATTTTGTAAAATATGTACATGTTTAAACAATCAAAAGTGTACAATATTAAATTATCATTTCCAGTTCTAGTGCtaa                             <  1:522420/100‑2 (MQ=255)                                 ttACTTTGCTCTCCGATTTTTTAAAATATGTACATGTTTAAACAATCAAAAGTGTACAATATTAAATTATCATTTCCAGTTCTAGTGCTATATTGgtagt                    <  1:4819737/100‑1 (MQ=255)                                             ccTATTTTTTAAAATATGTACATGTTTAAACAATCAAAAGTGTACAATATTAAATTATCATTTCCAGTTCTAGTGCTATATTGGTAGTAGTTGACTAAAt        >  1:4619628/1‑100 (MQ=255)                                                   ttttAAAATATGTACATGTTTAAACAATCAAAAGTGTACAATATTAAATTATCATTTCCAGTTCTAGTGCTATATTGGTAGTAGTTGACTAAATGAAAAt  >  1:4172674/1‑100 (MQ=255)                                                              |                                                                                         AGGATTACTCTCAAAATAACTATATCAATTATTTACTTTGCTCTCCTATTTTTTAAAATATCTACATGTTTAAACAATCAAAAGTGTACAATATTAAATTATCATTTCCAGTTCTAGTGCTATATTGGTAGTAGTTGACTAAATGAAAAT  >  NC_007793/1154336‑1154485

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑