D3A :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,140,030	C→T	R168C (CGT→TGT)	SAUSA300_RS05615 →	endonuclease MutS2

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,140,030	0	C	T	100.0%	334.7 / NA	117	R168C (CGT→TGT)	SAUSA300_RS05615	endonuclease MutS2
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (115/2); total (115/2)

Only 100 of 117 total aligned reads displayed.

ATGAAACATGCGATACGTATGATTTATATGATAATGCGAGTTATGAATTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAACGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGTTAGGAATGAAAGAAACGT  >  NC_007793/1139944‑1140124

ctccggcATGCGATACGTATGATTTATATGATAATGCGAGTTATGAATTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACaaaa                                                                                   >  1:6233563/7‑100 (MQ=255)

     aCATGCGATACGTATGATTTATATGATAATGCGAGTTATGAATTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTgg                                                                              >  1:1210713/1‑100 (MQ=255)

       aTGCGATACGTATGATTTATATGATAATGCGAGTTATGAATTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGAc                                                                            >  1:4725616/1‑100 (MQ=255)

       aTGCGATACGTATGATTTATATGATAATGCGAGTCCTGAATTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTGGACAAAATTTGGAc                                                                            >  1:4894654/1‑100 (MQ=255)

         gCGATACGTATGATTTATATGATAATGCGAGTTATGAATTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCg                                                                          >  1:5950620/1‑100 (MQ=255)

         gCGATACGTATGATTTATATGATAATGCGAGTTATGAATTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCg                                                                          >  1:5519068/1‑100 (MQ=255)

         gCGATACGTATGATTTATATGATAATGCGAGTTATGAATTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCg                                                                          >  1:4361499/1‑100 (MQ=255)

              aCGTATGATTTATATGATAATGCGAGTTATGAATTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTg                                                                     >  1:5375239/1‑100 (MQ=255)

              aCGTATGATTTATATGATAATGCGAGTTATGAATTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTg                                                                     >  1:4521307/1‑100 (MQ=255)

                gTATGATTTATATGATAATGCGAGTTATGAATTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGtt                                                                   >  1:4892130/1‑100 (MQ=255)

                  aTGATTTATATGATAATGCGAGTTATGAATTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTaa                                                                 >  1:214114/1‑100 (MQ=255)

                  aTGATTTATATGATAATGCGAGTTATGAATTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTAGGAccagatcggaat                                                                 >  1:1113498/1‑90 (MQ=255)

                           atGATAATGCGAGTTATGAATTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGc                                                        <  1:1172080/100‑1 (MQ=255)

                             gATAATGCGAGTTATGAATTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCaa                                                      >  1:1019523/1‑100 (MQ=255)

                              gtAATGCGAGTTATGAATTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACAGTATTGTTAAAAGCCAAGCaaa                                                     >  1:2231506/2‑100 (MQ=255)

                              ctAATGCGAGTTATGAATTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCaaa                                                     >  1:3383269/2‑100 (MQ=255)

                              aTAATGCGAGTTATGAATTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCaaa                                                     >  1:5221838/1‑100 (MQ=255)

                                 tggctccttATGAATTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCa                                                  >  1:5650849/8‑100 (MQ=255)

                                 ggccGAGTTATGAATTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCaagatc                                                  >  1:2910907/4‑96 (MQ=255)

                                    cGAGTTATGAATTGCAAGGGATTAGAAGTAAGATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAACCAAGCAGATCGGaa                                               >  1:5245554/1‑100 (MQ=255)

                                          aTGAATTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAAtc                                         >  1:2885581/1‑99 (MQ=255)

                                           tGAATTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAGATCGGaagagcaca                                        >  1:4067002/1‑93 (MQ=255)

                                            gAATTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTAt                                       >  1:5293844/1‑100 (MQ=255)

                                             taTTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATc                                      >  1:2852333/2‑100 (MQ=255)

                                             caTTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATc                                      >  1:4612175/2‑100 (MQ=255)

                                             aaTTGCAAGGGACTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCC‑AGCAGATCGGaagagcacacgt                                     >  1:2245750/1‑90 (MQ=255)

                                              cttGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCa                                     >  1:165750/2‑100 (MQ=255)

                                              aTTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGTCAAGCAGATCGGaagagcacacgt                                     >  1:2224262/1‑90 (MQ=255)

                                              aTTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCa                                     >  1:1027818/1‑100 (MQ=255)

                                              aTTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCa                                     >  1:5894548/1‑100 (MQ=255)

                                              aTTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCa                                     >  1:3905373/1‑100 (MQ=255)

                                              aTTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCa                                     >  1:1591636/1‑100 (MQ=255)

                                              aTTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCa                                     >  1:1466500/1‑100 (MQ=255)

                                               ttGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAg                                    >  1:4487946/1‑100 (MQ=255)

                                               tggCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAATCAAATCCGAAAAGATTATCAg                                    >  1:4879568/3‑100 (MQ=255)

                                               ctGCAAGGGGTTAGAAGCAAAATTTCTAGAACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGACAAGCAAATCAGAAAAAATTATCAg                                    >  1:4547007/2‑100 (MQ=255)

                                                tGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCACTGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGa                                   >  1:733823/1‑100 (MQ=255)

                                                tGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCACATCAGAAAAAATTATTAGa                                   >  1:3371883/1‑100 (MQ=255)

                                                tGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGa                                   >  1:3526524/1‑100 (MQ=255)

                                                tGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGa                                   >  1:1880489/1‑100 (MQ=255)

                                                tGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGa                                   >  1:3697754/1‑100 (MQ=255)

                                                tGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGa                                   >  1:5781806/1‑100 (MQ=255)

                                                tGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGa                                   >  1:4584149/1‑100 (MQ=255)

                                                tGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGa                                   >  1:3983595/1‑100 (MQ=255)

                                                tGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGa                                   >  1:6357844/1‑100 (MQ=255)

                                                tGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGa                                   >  1:1316310/1‑100 (MQ=255)

                                                tGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAACTATCAGa                                   >  1:3590169/1‑100 (MQ=255)

                                                tGCAAGGGATTAGAAGTAAAATTTCCAGCACGAATCAATGCATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGGAAAAATTATCAGa                                   >  1:5220320/1‑100 (MQ=255)

                                                 gCAAGGGATTAGGAGTAAAATTTCTAGCACGAATCAATGCATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGAt                                  >  1:2170724/1‑100 (MQ=255)

                                                 gCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGAt                                  >  1:39011/1‑100 (MQ=255)

                                                 gCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGAt                                  >  1:6447838/1‑100 (MQ=255)

                                                 gCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGAt                                  >  1:5187181/1‑100 (MQ=255)

                                                 gCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGAt                                  >  1:3742124/1‑100 (MQ=255)

                                                  ctaGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATg                                 >  1:3611520/3‑100 (MQ=255)

                                                  ataGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATg                                 >  1:5355657/3‑100 (MQ=255)

                                                  acaGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATg                                 >  1:1449918/3‑100 (MQ=255)

                                                   aaGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGc                                >  1:5193288/1‑100 (MQ=255)

                                                    aGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCt                               >  1:6268310/1‑100 (MQ=255)

                                                    aGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCt                               >  1:2367415/1‑100 (MQ=255)

                                                    aGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCt                               >  1:6313493/1‑100 (MQ=255)

                                                    aGGGATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCt                               >  1:2803910/1‑100 (MQ=255)

                                                    aGGAATTAGAAGTAAAATTTCTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCt                               <  1:5357442/100‑1 (MQ=255)

                                                                      cccTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGTTAGGAAt             >  1:4171241/3‑100 (MQ=255)

                                                                      cccTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGTTAGGAAt             >  1:1121114/3‑100 (MQ=255)

                                                                       ccTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGGCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGTTAGGAATg            >  1:2825090/2‑100 (MQ=255)

                                                                       ccTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGTTAGGAATg            >  1:814634/2‑100 (MQ=255)

                                                                       acTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGTTAGGAATg            >  1:4381686/2‑100 (MQ=255)

                                                                        gctgCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGTTAGGAATga           >  1:96080/4‑100 (MQ=255)

                                                                        ccaGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGTTAGGAATga           >  1:2855808/3‑100 (MQ=255)

                                                                        cTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAACTTATCAGATGCTATTGTAACAGTTAGGAATga           >  1:3119645/1‑100 (MQ=255)

                                                                        cTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGTTAGGAATga           >  1:4608324/1‑100 (MQ=255)

                                                                        cTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTATAACAGATCGGaagag           >  1:3130920/1‑97 (MQ=255)

                                                                        cTAGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATAGTAACAGATCGGaagag           >  1:743876/1‑97 (MQ=255)

                                                                         gggCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGAAACAGTTAGGTATgaa          >  1:5279454/3‑100 (MQ=255)

                                                                         aaGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGTTAGGAATgaa          >  1:417479/2‑100 (MQ=255)

                                                                          gccccGAATCAATGTATTAGACAAAATTTGGACCGAATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGATCGGagagcac         >  1:3334420/5‑94 (MQ=255)

                                                                          aGCACGAATCAATGTCTTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGTTAGGAATgaaa         >  1:4137014/1‑100 (MQ=255)

                                                                          aGCACGAATCAATGTATTAGACAATATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGATCGGaagagca         >  1:3350400/1‑95 (MQ=255)

                                                                          aGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTCAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGTTAGGAATgaaa         >  1:6469003/1‑100 (MQ=255)

                                                                          aGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGTAAATCAGAAAAAATTATCAGATGCTATTGTAACAGTTAGGAATgaaa         >  1:437624/1‑100 (MQ=255)

                                                                          aGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGTTAgatcggaag         >  1:4100492/1‑92 (MQ=255)

                                                                          aGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGTTAgatcggaag         >  1:5359698/1‑92 (MQ=255)

                                                                          aGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGTTAGGAATgaaa         >  1:2370439/1‑100 (MQ=255)

                                                                          aGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGTTAGGAATgaaa         >  1:2619637/1‑100 (MQ=255)

                                                                          aGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGTTAGGAATgaaa         >  1:745105/1‑100 (MQ=255)

                                                                          aGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGTTAGGAATgaaa         >  1:6066791/1‑100 (MQ=255)

                                                                          aGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGTTAGGAATgaaa         >  1:3256412/1‑100 (MQ=255)

                                                                          aGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGTTAGGAATgaaa         >  1:5918099/1‑100 (MQ=255)

                                                                          aGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGTTAGGAATgaaa         >  1:4469524/1‑100 (MQ=255)

                                                                          aGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGAAACAGATCGGaagagca         >  1:3150633/1‑95 (MQ=255)

                                                                          aGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGAAACAGATCGGaagagca         >  1:4936732/1‑95 (MQ=255)

                                                                          aGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTATACCAGATCGGaagagca         >  1:3848662/1‑95 (MQ=255)

                                                                          aGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATGGTAACAGATCGGaaggcac         >  1:4864601/1‑95 (MQ=255)

                                                                          aGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATCGCAACAGATCGGaagagca         >  1:452050/1‑95 (MQ=255)

                                                                          aGCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATAGTAACAGATCGGaagagca         >  1:2487318/1‑95 (MQ=255)

                                                                           gCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGTTAGGAATgaaag        >  1:2315521/1‑100 (MQ=255)

                                                                           gCACGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGTCAGGagatcgga        >  1:1754391/1‑93 (MQ=255)

                                                                           acccGAATCAATGTATTAGACAAAATTTGGACCGAATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGTTAGGAATgaaag        >  1:390690/4‑100 (MQ=255)

                                                                             aCGAATCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGCTAggtgatcggaag      >  1:2292849/1‑90 (MQ=255)

                                                                                 aTCAATGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGTTAGGAATGAAAGAAACGt  >  1:4285214/1‑100 (MQ=255)

ATGAAACATGCGATACGTATGATTTATATGATAATGCGAGTTATGAATTGCAAGGGATTAGAAGTAAAATTTCTAGCACGAATCAACGTATTAGACAAAATTTGGACCGTATTGTTAAAAGCCAAGCAAATCAGAAAAAATTATCAGATGCTATTGTAACAGTTAGGAATGAAAGAAACGT  >  NC_007793/1139944‑1140124

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`