D3A :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,101,325	T→A	A78A (GCA→GCT)	SAUSA300_RS05410 ←	divalent metal cation transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,101,325	0	T	A	88.0%	1355.1 / 117.8	532	A78A (GCA→GCT)	SAUSA300_RS05410	divalent metal cation transporter
Reads supporting (aligned to +/- strand): ref base T (20/44); new base A (3/465); total (23/509)
Fisher's exact test for biased strand distribution p-value = 2.85e-17
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.75e-02

Only 100 of 538 total aligned reads displayed.

GCAATAGGTCTTGATAAATAATGTCGTGTCATTTGAGCTAAGTCCATACCTGTTGCTATTCCTAATCTCACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGATCCATGTAACCA  >  NC_007793/1101233‑1101424

cgatctggTCTTGATAAATAATGTCGTGTCATTTGAGCTAAGTCCATACCTGTTGCTATTCCTAATCTCACTGTCATGCTTTGAAGTAACATTGCTGATa                                                                                              <  1:2810051/94‑1 (MQ=255)

    caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCt                                                                                          <  1:5891546/90‑1 (MQ=255)

    caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCt                                                                                          <  1:1188852/90‑1 (MQ=255)

    caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCt                                                                                          <  1:160036/90‑1 (MQ=255)

    caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCt                                                                                          <  1:5226366/90‑1 (MQ=255)

    caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCt                                                                                          <  1:1801970/90‑1 (MQ=255)

      ggcttatttaaaaaaTGACGTGTCATTTGTGCTAATTCCATACCAGTTGCTATTCCTAATCTTACTGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                                        <  1:4689182/92‑3 (MQ=255)

      ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCTGTTGCTATTCCTAATCTTACAGTCATACTGTGTAACAGCATAGCAGATAAGCtag                                                                                        <  1:6177315/92‑3 (MQ=255)

      ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                                        <  1:411152/92‑3 (MQ=255)

      ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                                        <  1:2766919/92‑3 (MQ=255)

      ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                                        <  1:4359573/92‑3 (MQ=255)

      ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                                        <  1:4567268/92‑3 (MQ=255)

      ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                                        <  1:5848008/92‑3 (MQ=255)

      ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                                        <  1:5655233/92‑3 (MQ=255)

      ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                                        <  1:2059999/92‑3 (MQ=255)

      ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                                        <  1:3572955/92‑3 (MQ=255)

      ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                                        <  1:5431341/92‑3 (MQ=255)

      ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                                        <  1:3852591/92‑3 (MQ=255)

      ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                                        <  1:1477128/92‑3 (MQ=255)

      ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                                        <  1:1352996/92‑3 (MQ=255)

      ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                                        <  1:1072418/92‑3 (MQ=255)

      ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                                        <  1:3945735/92‑3 (MQ=255)

        cttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtaggt                                                                                      <  1:508584/94‑5 (MQ=255)

        cttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtaggg                                                                                      <  1:5559185/94‑5 (MQ=255)

            tttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGAtta                                                                                  <  1:1716980/98‑3 (MQ=255)

            tttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGAtta                                                                                  <  1:211099/98‑3 (MQ=255)

            tttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGAtta                                                                                  <  1:1662512/98‑3 (MQ=255)

            tttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGAtta                                                                                  <  1:2260380/98‑3 (MQ=255)

            tttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGAtta                                                                                  <  1:4755801/98‑3 (MQ=255)

                                 tgtgCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGtat                                                             <  1:644742/97‑1 (MQ=255)

                                     cTAAATCCATAGCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCAAAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                                         <  1:4615828/100‑1 (MQ=255)

                                     cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                                         <  1:5787044/100‑1 (MQ=255)

                                     cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                                         <  1:1019785/100‑1 (MQ=255)

                                     cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                                         <  1:1576707/100‑1 (MQ=255)

                                     cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                                         <  1:1627972/100‑1 (MQ=255)

                                     cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                                         <  1:6049483/100‑1 (MQ=255)

                                     cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                                         <  1:415107/100‑1 (MQ=255)

                                     cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                                         <  1:4235219/100‑1 (MQ=255)

                                     cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                                         <  1:3019337/100‑1 (MQ=255)

                                     cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTGTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                                         <  1:6321818/100‑1 (MQ=255)

                                     cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGACATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                                         <  1:5440589/100‑1 (MQ=255)

                                       aaatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCat                                                       <  1:327894/97‑1 (MQ=255)

                                       aaatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCat                                                       <  1:6091393/97‑1 (MQ=255)

                                       aaatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCat                                                       <  1:6500136/97‑1 (MQ=255)

                                       aaatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCat                                                       <  1:824628/97‑1 (MQ=255)

                                       aaatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCat                                                       <  1:5486109/97‑1 (MQ=255)

                                        aatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCata                                                      <  1:5016900/98‑1 (MQ=255)

                                        aatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCata                                                      <  1:4308640/98‑1 (MQ=255)

                                        aatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCata                                                      <  1:4205640/98‑1 (MQ=255)

                                        aatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCata                                                      <  1:3190885/98‑1 (MQ=255)

                                        aatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCata                                                      <  1:5946143/98‑1 (MQ=255)

                                         atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGGGATTAAGATTACGAATAACAAGGTATAGCCatag                                                     <  1:6112021/99‑2 (MQ=255)

                                         atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAGCAAGGTATAGCCatat                                                     <  1:49218/99‑1 (MQ=255)

                                         atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                                                     <  1:5576308/99‑1 (MQ=255)

                                         atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                                                     <  1:1133609/99‑1 (MQ=255)

                                         atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                                                     <  1:900215/99‑1 (MQ=255)

                                         atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                                                     <  1:2404184/99‑1 (MQ=255)

                                         atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                                                     <  1:2498437/99‑1 (MQ=255)

                                         atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                                                     <  1:5389496/99‑1 (MQ=255)

                                         atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                                                     <  1:2650126/99‑1 (MQ=255)

                                         atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                                                     <  1:297136/99‑1 (MQ=255)

                                         atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                                                     <  1:3059950/99‑1 (MQ=255)

                                         atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                                                     <  1:3166104/99‑1 (MQ=255)

                                         atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                                                     <  1:3810563/99‑1 (MQ=255)

                                         atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatag                                                     <  1:700843/99‑2 (MQ=255)

                                         atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatag                                                     <  1:1049190/99‑2 (MQ=255)

                                         atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCataa                                                     <  1:3615412/99‑2 (MQ=255)

                                          tCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATAtt                                                    <  1:1856705/100‑1 (MQ=255)

                                           ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                   <  1:5182503/100‑1 (MQ=255)

                                           ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                   <  1:6136139/100‑1 (MQ=255)

                                           ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                   <  1:2470656/100‑1 (MQ=255)

                                           ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                   <  1:6364467/100‑1 (MQ=255)

                                           ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                   <  1:2172047/100‑1 (MQ=255)

                                           ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                   <  1:5692291/100‑1 (MQ=255)

                                           ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                   <  1:6583611/100‑1 (MQ=255)

                                           ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                   <  1:4434394/100‑1 (MQ=255)

                                            cATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTgg                                                  <  1:2221707/100‑1 (MQ=255)

                                             aTACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTgct                                                 <  1:6253137/100‑3 (MQ=255)

                                             aTACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTgcc                                                 <  1:2864383/100‑3 (MQ=255)

                                             aTACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTgag                                                 <  1:1994588/100‑3 (MQ=255)

                                              tACCTGTTGCTATTCCTAATCTCACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGCCACATTggga                                                <  1:4074664/100‑2 (MQ=255)

                                              tACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGGGATTAAGATTACGAATAACAAGGTATAGCCATATTggga                                                <  1:4042505/100‑2 (MQ=255)

                                               aCCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTGTgct                                               <  1:2915950/100‑2 (MQ=255)

                                               aCCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTGTgcc                                               <  1:5310511/100‑2 (MQ=255)

                                                ccTGGTGCTAATCCTAATTCCACTGTCAAGCTTTGAAGTAACATTGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGCCATATTgggggt                                              <  1:3765604/100‑4 (MQ=255)

                                                 cagTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTggggttg                                             <  1:4660576/98‑5 (MQ=255)

                                                 cagTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTGTGCTcc                                             <  1:6535535/98‑1 (MQ=255)

                                                  agTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTGTgctagt                                            <  1:123319/99‑5 (MQ=255)

                                                             cTAATCTCACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTgg                                 <  1:1887713/100‑2 (MQ=255)

                                                                  gtcACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGttc                            <  1:3325974/99‑2 (MQ=255)

                                                                    cACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATc                          >  1:3395907/1‑100 (MQ=255)

                                                                        ggcATGCTTTGAAGTAACATTGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGt                      <  1:343009/98‑1 (MQ=255)

                                                                             gCTTTGAAGTAACATTGCTGGTAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCg                 <  1:5755486/100‑1 (MQ=255)

                                                                               tttGAAGTAACATTGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCggg               <  1:3140660/100‑1 (MQ=255)

                                                                                ttGAAGTAACATTGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCGCCTTGCATTGATGTTATCCAGTTTCCGGGa              <  1:5983858/100‑1 (MQ=255)

                                                                                  gAAGTAACATTGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGagc            <  1:5253280/100‑3 (MQ=255)

                                                                                   aaGTAACATTGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGATcc           <  1:3488524/100‑1 (MQ=255)

                                                                                       aaCATTGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGATCCATGt       <  1:4818848/100‑1 (MQ=255)

                                                                                            tGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGATCCATGTAACCa  <  1:2601550/100‑1 (MQ=255)

                                                                                            tGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGATCCATGTAACCa  <  1:3716167/100‑1 (MQ=255)

GCAATAGGTCTTGATAAATAATGTCGTGTCATTTGAGCTAAGTCCATACCTGTTGCTATTCCTAATCTCACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGATCCATGTAACCA  >  NC_007793/1101233‑1101424

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`