D3A :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,101,304	T→A	T85T (ACA→ACT)	SAUSA300_RS05410 ←	divalent metal cation transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,101,304	0	T	A	88.4%	1505.4 / 125.4	587	T85T (ACA→ACT)	SAUSA300_RS05410	divalent metal cation transporter
Reads supporting (aligned to +/- strand): ref base T (16/52); new base A (4/515); total (20/567)
Fisher's exact test for biased strand distribution p-value = 6.43e-13
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 588 total aligned reads displayed.

AGTTCTGCAATGATCCAAAAGATTATAGCAATAGGTCTTGATAAATAATGTCGTGTCATTTGAGCTAAGTCCATACCTGTTGCTATTCCTAATCTCACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCC  >  NC_007793/1101206‑1101401

aGTTCTGCAATGATCCAAAAGATTATAGCAATAGGTCTTGATAAATAATGTCGTGTCATTTGAGCTAAGTCCATACCTGTTGCTATTCCTAATCTCACTg                                                                                                  <  1:949831/100‑1 (MQ=255)

aGTTCTGCAATGATCCAAAAGATTATAGCAATAGGTCTTGATAAATAATGTCGTGTCATTTGAGCTAAGTCCATACCTGTTGCTATTCCTAATCTCACTg                                                                                                  <  1:702733/100‑1 (MQ=255)

  ttCTGCAATGATCCAAAAGATTATAGCAATAGGTCTTGATAAATAATGTCGTGTCATTTGAGCTAAGTCCATACCTGTTGCTATTCCTAATCTCACTGTc                                                                                                <  1:6604932/100‑1 (MQ=255)

  ttCTGCAATAATCCAGAACATAATTGCTACAGGCTTATTTAAAAAATGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTc                                                                                                <  1:5952472/100‑1 (MQ=255)

   tCTGCAATAATCCAGAACATAATTGCTACAGGCTTATTTAAAAAATGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCa                                                                                               <  1:2525380/100‑1 (MQ=255)

   tCTGCAATAATCCAGAACATAATTGCTACAGGCTTATTTAAAAAATGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCa                                                                                               <  1:2226276/100‑1 (MQ=255)

    cTGCAATGATCCAAAAGATTATAGCAATAGGTCTTGATAAATAATGTCGTGTCATTTGAGCTAAGTCCATACCTGTTGCTATTCCTAATCTCACTGTCag                                                                                              <  1:5163645/100‑2 (MQ=255)

    cTGCAATGATCCAAAAGATTATAGCAATAGGTCTTGATAAATAATGTCGTGTCATTTGAGCTAAGTCCATACCTGTTGCTATTCCTAATCTCACTGTCAt                                                                                              <  1:3025290/100‑1 (MQ=255)

    cTGCAATAATCCAGAACATAATTGCTACAGGCTTATTTAAAAAATGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCAt                                                                                              <  1:5025744/100‑1 (MQ=255)

    cTGCAATAATCCAGAACATAATTGCTACAGGCTTATTTAAAAAATGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCAt                                                                                              <  1:2455597/100‑1 (MQ=255)

    cTGCAATAATCCAGAACATAATTGCTACAGGCTTATTTAAAAAATGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCAt                                                                                              <  1:1920395/100‑1 (MQ=255)

           gATCCAAAAGATTATAGCAATAGGTCTTGATAAATAATGTCGTGTCATTTGAGCTAAGTCCATACCTGTTGCTATTCCTAATCTCACTGTCATGCTTTGa                                                                                       <  1:1825148/100‑1 (MQ=255)

                           cgatctggTCTTGATAAATAATGTCGTGTCATTTGAGCTAAGTCCATACCTGTTGCTATTCCTAATCTCACTGTCATGCTTTGAAGTAACATTGCTGATa                                                                       <  1:2810051/94‑1 (MQ=255)

                               caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATGCTTTGTAACAGCATAGCAGATAAGCt                                                                   <  1:2193077/90‑1 (MQ=255)

                               caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCt                                                                   <  1:5668444/90‑1 (MQ=255)

                               caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCt                                                                   <  1:6151238/90‑1 (MQ=255)

                               caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCt                                                                   <  1:2265853/90‑1 (MQ=255)

                               caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCt                                                                   <  1:5891546/90‑1 (MQ=255)

                               caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCt                                                                   <  1:26552/90‑1 (MQ=255)

                               caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCt                                                                   <  1:3675516/90‑1 (MQ=255)

                               caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCt                                                                   <  1:3833604/90‑1 (MQ=255)

                               caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCt                                                                   <  1:160036/90‑1 (MQ=255)

                               caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCt                                                                   <  1:1585609/90‑1 (MQ=255)

                               caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCt                                                                   <  1:802702/90‑1 (MQ=255)

                               caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCt                                                                   <  1:4222963/90‑1 (MQ=255)

                               caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCt                                                                   <  1:4689108/90‑1 (MQ=255)

                                 ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                 <  1:3599086/92‑3 (MQ=255)

                                 ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                 <  1:3957797/92‑3 (MQ=255)

                                 ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                 <  1:5848008/92‑3 (MQ=255)

                                 ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                 <  1:54355/92‑3 (MQ=255)

                                 ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                 <  1:4573560/92‑3 (MQ=255)

                                 ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                 <  1:6207211/92‑3 (MQ=255)

                                 ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                 <  1:6406573/92‑3 (MQ=255)

                                 ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                 <  1:1527072/92‑3 (MQ=255)

                                 ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                 <  1:654151/92‑3 (MQ=255)

                                 ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                 <  1:2059999/92‑3 (MQ=255)

                                 ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                 <  1:1148358/92‑3 (MQ=255)

                                 ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                 <  1:1065490/92‑3 (MQ=255)

                                 ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                 >  1:297687/9‑98 (MQ=255)

                                  gcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGa                                                                <  1:5240384/93‑1 (MQ=255)

                                       tttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGAtta                                                           <  1:4755801/98‑3 (MQ=255)

                                       tttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGAtta                                                           <  1:4144486/98‑3 (MQ=255)

                                       tttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGAtta                                                           <  1:1716980/98‑3 (MQ=255)

                                       tttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGAtta                                                           <  1:1662512/98‑3 (MQ=255)

                                               atGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACg                                                   <  1:4838100/100‑1 (MQ=255)

                                                tgacGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACgg                                                  <  1:3928368/97‑2 (MQ=255)

                                                                cTAAGTCCATACCTGTTGCTATTCCTAATCTCACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGcc                                  <  1:2341124/100‑1 (MQ=255)

                                                                cTAAATCCATAGCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCAAAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                  <  1:4615828/100‑1 (MQ=255)

                                                                cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATTCTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                  <  1:4458517/100‑1 (MQ=255)

                                                                cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                  <  1:1019785/100‑1 (MQ=255)

                                                                cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                  <  1:3416972/100‑1 (MQ=255)

                                                                cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                  <  1:5782615/100‑1 (MQ=255)

                                                                cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                  <  1:2766684/100‑1 (MQ=255)

                                                                cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                  <  1:6049483/100‑1 (MQ=255)

                                                                cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                  <  1:6094833/100‑1 (MQ=255)

                                                                cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGGAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                  <  1:3798811/100‑1 (MQ=255)

                                                                cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTGTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                  <  1:6321818/100‑1 (MQ=255)

                                                                  aaatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCat                                <  1:1295275/97‑1 (MQ=255)

                                                                  aaatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCat                                <  1:1112754/97‑1 (MQ=255)

                                                                   aatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCata                               <  1:5523384/98‑1 (MQ=255)

                                                                    atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCGTAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatag                              <  1:1029824/99‑2 (MQ=255)

                                                                    atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTTGAGGTTAAGATTACGAATAACAAGGTATAGCCatag                              <  1:121663/99‑2 (MQ=255)

                                                                    atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAGCAAGGTATAGCCatat                              <  1:49218/99‑1 (MQ=255)

                                                                    atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAATGTATAGCCatat                              <  1:4107797/99‑1 (MQ=255)

                                                                    atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                              <  1:4342036/99‑1 (MQ=255)

                                                                    atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                              <  1:1638066/99‑1 (MQ=255)

                                                                    atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                              <  1:6469161/99‑1 (MQ=255)

                                                                    atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                              <  1:5203872/99‑1 (MQ=255)

                                                                    atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                              <  1:2490934/99‑1 (MQ=255)

                                                                    atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                              <  1:3059950/99‑1 (MQ=255)

                                                                    atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                              <  1:3143389/99‑1 (MQ=255)

                                                                    atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                              <  1:5461329/99‑1 (MQ=255)

                                                                    atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                              <  1:3760421/99‑1 (MQ=255)

                                                                    atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatag                              <  1:4394564/99‑2 (MQ=255)

                                                                    atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatag                              <  1:6512485/99‑2 (MQ=255)

                                                                    atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatag                              <  1:5728977/99‑2 (MQ=255)

                                                                    atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatag                              <  1:5575187/99‑2 (MQ=255)

                                                                    atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCataa                              <  1:877554/99‑2 (MQ=255)

                                                                    atCCATACCAGTTGCTATTCCTAATCTTACAGTCACACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                              <  1:4654869/99‑1 (MQ=255)

                                                                      ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTg                            <  1:3368674/100‑1 (MQ=255)

                                                                      ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTg                            <  1:2142727/100‑1 (MQ=255)

                                                                      ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTg                            <  1:5630255/100‑1 (MQ=255)

                                                                      ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTg                            <  1:5394440/100‑1 (MQ=255)

                                                                       cATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTgg                           <  1:4161585/100‑1 (MQ=255)

                                                                        aTACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTggg                          <  1:406054/100‑1 (MQ=255)

                                                                        aTACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTgcc                          <  1:2864383/100‑3 (MQ=255)

                                                                        aTACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTgag                          <  1:1994588/100‑3 (MQ=255)

                                                                         tACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatatcgagg                         <  1:6119408/100‑6 (MQ=255)

                                                                          aCCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTGTgct                        <  1:2915950/100‑2 (MQ=255)

                                                                          aCCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTGTgcc                        <  1:5310511/100‑2 (MQ=255)

                                                                          aCCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTGTgca                        <  1:4305023/100‑2 (MQ=255)

                                                                          aCCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCAAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTGTgct                        <  1:6257001/100‑2 (MQ=255)

                                                                           ccagTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTGTgcta                       <  1:187727/97‑3 (MQ=255)

                                                                               ttGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTGTGCTcctag                   <  1:3315288/100‑4 (MQ=255)

                                                                                      tCCTAATCTCACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCaag            <  1:3232664/100‑3 (MQ=255)

                                                                                              tcACTGTCATGCTTTGAAGCAACATTGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATCGCCATATTGGGCGCCACCTTGCATTGATGTTAt    >  1:3491147/1‑100 (MQ=255)

                                                                                               cACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATc   >  1:6008986/1‑100 (MQ=255)

                                                                                               cACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATc   >  1:5006168/1‑100 (MQ=255)

                                                                                               cACTGCCATGCTTTGAAGTAACATTGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATc   >  1:3180555/1‑100 (MQ=255)

                                                                                                aCTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATcc  <  1:1354062/100‑1 (MQ=255)

AGTTCTGCAATGATCCAAAAGATTATAGCAATAGGTCTTGATAAATAATGTCGTGTCATTTGAGCTAAGTCCATACCTGTTGCTATTCCTAATCTCACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCC  >  NC_007793/1101206‑1101401

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`