D3A :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,101,301	C→T	V86V (GTG→GTA)	SAUSA300_RS05410 ←	divalent metal cation transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,101,301	0	C	T	92.0%	1411.4 / 56.4	604	V86V (GTG→GTA)	SAUSA300_RS05410	divalent metal cation transporter
Reads supporting (aligned to +/- strand): ref base C (3/45); new base T (4/552); total (7/597)
Fisher's exact test for biased strand distribution p-value = 1.32e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 620 total aligned reads displayed.

CTAGTTCTGCAATGATCCAAAAGATTATAGCAATAGGTCTTGATAAATAATGTCGTGTCATTTGAGCTAAGTCCATACCTGTTGCTATTCCTAATCTCACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATC  >  NC_007793/1101204‑1101400

cTAATTCTGCAATAATCCAGAACATAATTGCTACAGGCTTATTTAAAAAATGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTAc                                                                                                   <  1:6546289/100‑1 (MQ=255)

cTAATTCTGCAATAATCCAGAACATAATTGCTACAGGCTTATTTAAAAAATGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTAc                                                                                                   <  1:621241/100‑1 (MQ=255)

cTAATTCTGCAATAATCCAGAACATAATTGCTACAGGCTTATTTAAAAAATGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTAc                                                                                                   <  1:554492/100‑1 (MQ=255)

  aGTTCTGCAATGATCCAAAAGATTATAGCAATAGGTCTTGATAAATAATGTCGTGTCATTTGAGCTAAGTCCATACCTGTTGCTATTCCTAATCTCACTg                                                                                                 <  1:949831/100‑1 (MQ=255)

   attCTGCAATAATCCAGAACATAATTGCTACAGGCTTATTTAAAAAATGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTAcagg                                                                                                <  1:3664459/99‑4 (MQ=255)

    ttCTGCAATGATCCAAAAGATTATAGCAATAGGTCTTGATAAATAATGTCGTGTCATTTGAGCTAAGTCCATACCTGTTGCTATTCCTAATCTCACTGTc                                                                                               <  1:1113608/100‑1 (MQ=255)

    ttCTGCAATAATCCAGAACATAATTGCTACAGGCTTATTTAAAAAATGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTc                                                                                               <  1:4127854/100‑1 (MQ=255)

    ttCTGCAATAATCCAGAACATAATTGCTACAGGCTTATTTAAAAAATGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTc                                                                                               <  1:4388742/100‑1 (MQ=255)

    ttCTGCAATAATCCAGAACATAATTGCTACAGGCTTATTTAAAAAATGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTc                                                                                               <  1:2500112/100‑1 (MQ=255)

    ttCTGCAATAATCCAGAACATAATTGCTACAGGCTTAGTTAAAAAATGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTc                                                                                               <  1:21027/100‑1 (MQ=255)

     tCTGCAATGATCCAAAAGATTATAGCAATAGGTCTTGATAAATAATGTCGTGTCATTTGAGCTAAGTCCATACCTGTTGCTATTCCTAATCTCACTGTCa                                                                                              <  1:1045729/100‑1 (MQ=255)

      cTGCAATAATCCAGAACATAATTGCTACAGGCTTATTTAAAAAATGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTAcaggcct                                                                                             <  1:3170011/100‑7 (MQ=255)

      cTGCAATAATCCAGAACATAATTGCTACAGGCTTATTTAAAAAATGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCAt                                                                                             <  1:6020484/100‑1 (MQ=255)

      cTGCAATAATCCAGAACATAATTGCTACAGGCTTATTTAAAAAATGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCAt                                                                                             <  1:1402117/100‑1 (MQ=255)

      cTGCAATAATCCAGAACATAATTGCTACAGGCTTATTTAAAAAATGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCAt                                                                                             <  1:4848280/100‑1 (MQ=255)

      cTGCAATAATCCAGAACATAATTGCTACAGGCTTATTTAAAAAATGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCAt                                                                                             <  1:4923592/100‑1 (MQ=255)

      cTGCAATAATCCAGAACATAATTGCTACAGGCTTATTTAAAAAATGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCAt                                                                                             <  1:2295/100‑1 (MQ=255)

      cTGCAATAATCCAGAACATAATTGCTACAGGCTTATTTAAAAAATGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCAt                                                                                             <  1:3947413/100‑1 (MQ=255)

        gCAATGATCCAAAAGATTATAGCAATAGGTCTTGATAAATAATGTCGTGTCATTTGAGCTAAGTCCATACCTGTTGCTATTCCTAATCTCACTGTCATgg                                                                                           <  1:3362279/100‑2 (MQ=255)

                                 caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCt                                                                  <  1:1586072/90‑1 (MQ=255)

                                 caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCt                                                                  <  1:5896882/90‑1 (MQ=255)

                                 caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCt                                                                  <  1:2991958/90‑1 (MQ=255)

                                 caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCt                                                                  <  1:3833604/90‑1 (MQ=255)

                                 caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCt                                                                  <  1:1227488/90‑1 (MQ=255)

                                 caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCt                                                                  <  1:5226366/90‑1 (MQ=255)

                                 caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCt                                                                  <  1:4248730/90‑1 (MQ=255)

                                 caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCt                                                                  <  1:802702/90‑1 (MQ=255)

                                 caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCt                                                                  <  1:4667878/90‑1 (MQ=255)

                                 caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCt                                                                  <  1:1743939/90‑1 (MQ=255)

                                 caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCt                                                                  <  1:1654648/90‑1 (MQ=255)

                                 caggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACGTTGTAACAGCATAGCAGATAAGCt                                                                  <  1:6644836/90‑1 (MQ=255)

                                   ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                <  1:5483979/92‑3 (MQ=255)

                                   ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                <  1:5082801/92‑3 (MQ=255)

                                   ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                <  1:4794963/92‑3 (MQ=255)

                                   ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                <  1:5655233/92‑3 (MQ=255)

                                   ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                <  1:3599086/92‑3 (MQ=255)

                                   ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                <  1:3105327/92‑3 (MQ=255)

                                   ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                <  1:3296052/92‑3 (MQ=255)

                                   ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                <  1:1844772/92‑3 (MQ=255)

                                   ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                <  1:1072418/92‑3 (MQ=255)

                                   ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                <  1:3047009/92‑3 (MQ=255)

                                   ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                <  1:6515827/92‑3 (MQ=255)

                                   ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                <  1:6127342/92‑3 (MQ=255)

                                   ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                <  1:2671208/92‑3 (MQ=255)

                                   ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                <  1:1527072/92‑3 (MQ=255)

                                   ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                <  1:1148358/92‑3 (MQ=255)

                                   ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                <  1:6471088/92‑3 (MQ=255)

                                   ggcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtag                                                                <  1:6408766/92‑3 (MQ=255)

                                     cttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCtggtt                                                              <  1:5423671/94‑5 (MQ=255)

                                         tttaaaaaaTGACGTGTCATTTGTGCTAAGTCCATACCAGTTGCTATTCCTAATCTTCCAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGAtta                                                          <  1:5598134/98‑3 (MQ=255)

                                         tttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGAtta                                                          <  1:2820443/98‑3 (MQ=255)

                                         tttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGAtta                                                          <  1:2568799/98‑3 (MQ=255)

                                                 atGTCGTGTCATTTGAGCTAAGTCCATACCTGTTGCTATTCCTAATCTCACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGAAATAAGAATTACg                                                  <  1:4598007/100‑1 (MQ=255)

                                                               gtgccaaatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGtata                                    >  1:6322559/9‑100 (MQ=255)

                                                                  cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTGGAGATTAAGATTACGAATAACAAGGTATGGcc                                 <  1:5868606/100‑1 (MQ=255)

                                                                  cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGATATTAAGATTACGAATAACAAGGTATAGcc                                 <  1:5180429/100‑1 (MQ=255)

                                                                  cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                 <  1:6097682/100‑1 (MQ=255)

                                                                  cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                 <  1:5787044/100‑1 (MQ=255)

                                                                  cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                 <  1:1607154/100‑1 (MQ=255)

                                                                  cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                 <  1:2039743/100‑1 (MQ=255)

                                                                  cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                 <  1:2766684/100‑1 (MQ=255)

                                                                  cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                 <  1:3875748/100‑1 (MQ=255)

                                                                  cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                 <  1:1019785/100‑1 (MQ=255)

                                                                  cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGATATAGcc                                 <  1:2240123/100‑1 (MQ=255)

                                                                  cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGACATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGcc                                 <  1:5440589/100‑1 (MQ=255)

                                                                    aaatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCat                               <  1:712155/97‑1 (MQ=255)

                                                                    aaatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCat                               <  1:1295275/97‑1 (MQ=255)

                                                                    aaatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCat                               <  1:321531/97‑1 (MQ=255)

                                                                    aaatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCat                               <  1:3479748/97‑1 (MQ=255)

                                                                    aaatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTCTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCat                               <  1:1677287/97‑1 (MQ=255)

                                                                     aatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCata                              <  1:4205640/98‑1 (MQ=255)

                                                                      atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                             <  1:5368485/99‑1 (MQ=255)

                                                                      atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                             <  1:4333802/99‑1 (MQ=255)

                                                                      atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                             <  1:2216854/99‑1 (MQ=255)

                                                                      atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                             <  1:2952745/99‑1 (MQ=255)

                                                                      atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                             <  1:4714408/99‑1 (MQ=255)

                                                                      atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                             <  1:339726/99‑1 (MQ=255)

                                                                      atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                             <  1:574723/99‑1 (MQ=255)

                                                                      atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatat                             <  1:4528698/99‑1 (MQ=255)

                                                                      atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatag                             <  1:4633296/99‑2 (MQ=255)

                                                                      atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCatag                             <  1:6159748/99‑2 (MQ=255)

                                                                      atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCataa                             <  1:3798282/99‑2 (MQ=255)

                                                                      atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCataa                             <  1:877554/99‑2 (MQ=255)

                                                                        ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTg                           <  1:5692291/100‑1 (MQ=255)

                                                                        ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTg                           <  1:4157676/100‑1 (MQ=255)

                                                                        ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTg                           <  1:6069277/100‑1 (MQ=255)

                                                                        ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTg                           <  1:2470656/100‑1 (MQ=255)

                                                                        ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTg                           <  1:4434394/100‑1 (MQ=255)

                                                                         cATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTgg                          <  1:242106/100‑1 (MQ=255)

                                                                         cATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTgc                          <  1:196963/100‑2 (MQ=255)

                                                                           tACCTGTTGCTATTCCTAATCTCACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGCCACATTggga                        <  1:4074664/100‑2 (MQ=255)

                                                                           tACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGGGATTAAGATTACGAATAACAAGGTATAGCCATATTggga                        <  1:4042505/100‑2 (MQ=255)

                                                                           tACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTgcct                        <  1:2165125/100‑4 (MQ=255)

                                                                            aCCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTGTgct                       <  1:5020361/100‑2 (MQ=255)

                                                                            aCCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCAAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTGTgct                       <  1:6257001/100‑2 (MQ=255)

                                                                             ccagTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGATTAAGATTACGAATAACAAGGTATAGCCATATTGTgctg                      <  1:3758896/97‑3 (MQ=255)

                                                                                         ccTAATCTCACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGAAATAAGAATTAC‑AATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGa         >  1:5279603/1‑100 (MQ=255)

                                                                                          cTAATCTCACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTgg         <  1:1887713/100‑2 (MQ=255)

                                                                                                 cACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGCAATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATc  >  1:5970405/1‑100 (MQ=255)

                                                                                                 cACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATc  >  1:2872839/1‑100 (MQ=255)

CTAGTTCTGCAATGATCCAAAAGATTATAGCAATAGGTCTTGATAAATAATGTCGTGTCATTTGAGCTAAGTCCATACCTGTTGCTATTCCTAATCTCACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGAAATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATC  >  NC_007793/1101204‑1101400

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`