D3A :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,099,776	G→A	M24I (ATG→ATA)	SAUSA300_RS05405 →	membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,099,776	0	G	A	100.0%	446.0 / NA	160	M24I (ATG→ATA)	SAUSA300_RS05405	membrane protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (108/52); total (108/52)

Only 100 of 162 total aligned reads displayed.

TATTAAACAAAGAAAGGATTTTAAGATGAATAGAAAACCTGAATTAATCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATGGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGAAGCAATTATCTCAGAACGGTGGCAAGGTTTCTTTA  >  NC_007793/1099680‑1099869

tatTAAACAAAGAAAGGATTTTAAGATGAATAGAAAGCCTGAATTAACCATTGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATaggg                                                                                            <  1:6537106/100‑1 (MQ=255)

 atTAAACAAAGAAAGGATTTTAAGATGAATAGAAAACCTGAATTAATCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGc                                                                                           >  1:3245384/1‑100 (MQ=255)

  ttAAACAAAGAAAGGATTTTAAGATGAATAGAAAACCTGAATTAATCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCt                                                                                          <  1:341808/100‑1 (MQ=255)

  ttAAACAAAGAAAGGATTTTAAGATGAATAGAAAACCTGAATTAATCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCt                                                                                          <  1:4701134/100‑1 (MQ=255)

  ttAAACAAAGAAAGGATTTTAAGATGAATAGAAAACCTGAATTAATCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCt                                                                                          <  1:5133201/100‑1 (MQ=255)

   tAAACAAAGAAAGGATTTTAAGATGAATAGAAAACCTGAATTGATCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTa                                                                                         <  1:311495/100‑1 (MQ=255)

   tAAACAAAGAAAGGATTTTAAGATGAATAGAAAACCTGAATTAATCATGGCTTGGTTTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGcag                                                                                         >  1:5092494/1‑98 (MQ=255)

   tAAACAAAGAAAGGATTTTAAGATGAATAGAAAACCTGAATTAATCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCtt                                                                                         <  1:1596712/100‑2 (MQ=255)

   tAAACAAAGAAAGGATTTTAAGATGAATAGAAAACCTGAATTAATCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTa                                                                                         >  1:6271273/1‑100 (MQ=255)

   tAAACAAAGAAAGGATTTTAAGATGAATAGAAAACCTGAATTAATCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTa                                                                                         <  1:4663322/100‑1 (MQ=255)

   tAAACAAAGAAAGGATTTTAAGATGAATAGAAAACCTGAATTAATCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTa                                                                                         <  1:5658557/100‑1 (MQ=255)

    aaaCAAAGAAAGGATTTTAAGATGAATAGAAAACCTGAATTAATCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTaa                                                                                        <  1:3794539/100‑2 (MQ=255)

    aaaCAAAGAAAGGATTTTAAGATGAATAGAAAACCTGAATTAATCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTaa                                                                                        <  1:4410971/100‑2 (MQ=255)

     aaCAAAGAAAGGATTTTAAGATGAATAGAAAACCTGAATTAATCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTAtt                                                                                       <  1:3488338/100‑2 (MQ=255)

      aCAAAGAAAGGATTTTAAGATGAATAGAAAACCTGAATTAATCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATcc                                                                                      >  1:5481163/1‑100 (MQ=255)

       cAAAGAAAGGATTTTAAGATGAATAGAAAACCTGAATTAATCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATcag                                                                                     <  1:850551/100‑3 (MQ=255)

         aagaaagGATTTTAAGATGAATAGAAAACCTGAATTAATCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATaggacagatcgga                                                                                   >  1:6300981/1‑90 (MQ=255)

         aagaaagGATTTTAAGATGAATAGAAAACCTGAATTAATCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTAt                                                                                   >  1:2463666/1‑100 (MQ=255)

          ctatggtgttttAAGATGAATAGAAAGCCTGAATTAATCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTAtt                                                                                  >  1:484018/9‑100 (MQ=255)

            aaagGATTTTAAGATGAATAGAAAACCTGAATTAATCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTAtttt                                                                                >  1:1675514/1‑100 (MQ=255)

                     tAAGATGAATAGAAAACCTGAATTAATCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTaaaa                                                                       <  1:2741043/100‑1 (MQ=255)

                            aaTAGAAAACCTGAATTAATCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTGTAAAAAGTGGTa                                                                <  1:5979694/100‑1 (MQ=255)

                             aTAGAAAACCTGAATTAATCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTaa                                                               <  1:5326257/100‑1 (MQ=255)

                               aGAAAACCTGAATTAATCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATg                                                             >  1:1323320/1‑100 (MQ=255)

                               aGAAAACCTGAATTAATCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATg                                                             <  1:1206648/100‑1 (MQ=255)

                                    aCCTGAATTAATCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATca                                                        >  1:5884639/1‑100 (MQ=255)

                                      cTGAATTAATCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATcaca                                                      <  1:5820199/100‑1 (MQ=255)

                                            tAATCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTga                                                >  1:13160/1‑100 (MQ=255)

                                             aaTCATGGCTTGGATTGCAAATAGAATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGAATCACAACGTgaa                                               >  1:3594940/1‑100 (MQ=255)

                                              ctCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTgaag                                              >  1:185515/2‑100 (MQ=255)

                                              ctCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTgaag                                              >  1:3115424/2‑100 (MQ=255)

                                               tCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTgaaga                                             >  1:1762446/1‑100 (MQ=255)

                                               ccATGGCTTGGATTGCAAATAGTATTAGTATTCTTTATTTATTAGTTATAGGGCTCTCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTgaaga                                             >  1:3002564/2‑100 (MQ=255)

                                               ccATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAGCGTgaaga                                             >  1:6642199/2‑100 (MQ=255)

                                               acATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTgaaga                                             >  1:5430455/2‑100 (MQ=255)

                                                tgtGGCTTGGATTGCAAATAGGATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTgaagaa                                            >  1:3845286/3‑100 (MQ=255)

                                                gaTGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTgaagat                                            >  1:381127/2‑99 (MQ=255)

                                                cttGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTgaagaa                                            >  1:1262784/3‑100 (MQ=255)

                                                cgtGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTgaagaa                                            >  1:6273919/3‑100 (MQ=255)

                                                cctGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTgaagaa                                            >  1:440744/3‑100 (MQ=255)

                                                cctGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTgaagaa                                            >  1:364544/3‑100 (MQ=255)

                                                cctGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTgaagaa                                            >  1:3384971/3‑100 (MQ=255)

                                                cATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTgaagaa                                            >  1:6491077/1‑100 (MQ=255)

                                                cATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTgaagaa                                            >  1:6499792/1‑100 (MQ=255)

                                                cATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGCGGTAATGCATCACAACGTgaagaa                                            >  1:2185880/1‑100 (MQ=255)

                                                 gtGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAAt                                           >  1:600778/2‑100 (MQ=255)

                                                 ctGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAAt                                           >  1:4589780/2‑100 (MQ=255)

                                                 ctGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAACGGGTAATGCATCACAACGTGAAGAAt                                           >  1:1982341/2‑100 (MQ=255)

                                                 aTGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTTTTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTgaagatc                                           >  1:5639449/1‑98 (MQ=255)

                                                 aTGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAAt                                           >  1:5149041/1‑100 (MQ=255)

                                                  tGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAAtt                                          >  1:1261703/1‑100 (MQ=255)

                                                  tGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAAtt                                          >  1:1600383/1‑100 (MQ=255)

                                                  tGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAAtt                                          >  1:1523999/1‑100 (MQ=255)

                                                  tGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAAtt                                          >  1:5366622/1‑100 (MQ=255)

                                                  tGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAAtt                                          >  1:2095446/1‑100 (MQ=255)

                                                  tGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAAtt                                          >  1:3008368/1‑100 (MQ=255)

                                                  tGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAAtt                                          >  1:2623421/1‑100 (MQ=255)

                                                  tGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAAtt                                          >  1:3998218/1‑100 (MQ=255)

                                                  tGGCTTGGATTGCAAATAGTATTAGCATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAAtt                                          >  1:4202134/1‑100 (MQ=255)

                                                   ggCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTa                                         >  1:4162964/1‑100 (MQ=255)

                                                   ggCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTa                                         >  1:1348176/1‑100 (MQ=255)

                                                   ggCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTa                                         >  1:3183554/1‑100 (MQ=255)

                                                   ggCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTa                                         >  1:5518787/1‑100 (MQ=255)

                                                   ggCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTa                                         >  1:2438356/1‑100 (MQ=255)

                                                   ggCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTa                                         >  1:2038127/1‑100 (MQ=255)

                                                   ggCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTa                                         >  1:4003478/1‑100 (MQ=255)

                                                   ggCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTa                                         >  1:4525105/1‑100 (MQ=255)

                                                    acctGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAg                                        >  1:5727565/4‑100 (MQ=255)

                                                     cTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGc                                       >  1:2339416/1‑100 (MQ=255)

                                                       tGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGa                                     >  1:2454044/1‑100 (MQ=255)

                                                        ggATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGaa                                    >  1:3130287/1‑100 (MQ=255)

                                                        ggATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGaa                                    >  1:6381944/1‑100 (MQ=255)

                                                         caTTGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGAAg                                   >  1:2075426/2‑100 (MQ=255)

                                                           ttGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGAAGCa                                 >  1:1409228/1‑100 (MQ=255)

                                                            tGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGAAGCaa                                >  1:4153103/1‑100 (MQ=255)

                                                            tGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGAAGCaa                                >  1:4339325/1‑100 (MQ=255)

                                                            tGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGAAGCaa                                >  1:5519731/1‑100 (MQ=255)

                                                            tGCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGAAGCaa                                >  1:5326605/1‑100 (MQ=255)

                                                             gCAAATAGTATTAGTATTATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGAAGCAAt                               >  1:3839409/1‑100 (MQ=255)

                                                                   agtattagtattATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGAAGCAATTAtctc                         <  1:2572/100‑1 (MQ=255)

                                                                   agtattagtattATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGAAGCAATTAtctc                         <  1:4074097/100‑1 (MQ=255)

                                                                   agtattagtattATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGAAGCAATTAtctc                         <  1:5232334/100‑1 (MQ=255)

                                                                   agtattagtattATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGAAGCAATTAtctc                         <  1:1432471/100‑1 (MQ=255)

                                                                   agtattagtattATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGAAGCAATTAtctc                         <  1:1109575/100‑1 (MQ=255)

                                                                   agtattagtattATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGAAGCAATTAtctc                         <  1:3150630/100‑1 (MQ=255)

                                                                   agtattagtattATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGAAGCAATTAtctc                         <  1:6237969/100‑1 (MQ=255)

                                                                   agtattagtattATTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGAAGCAATTAtctc                         <  1:2058730/100‑1 (MQ=255)

                                                                      attagtattaTTTATTTATTAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGAAGCAATTATCTCAGa                      >  1:1148641/1‑100 (MQ=255)

                                                                               atttatttattAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACACCGTGAAGAATTAGCGAAGCAATTATCTCAGAACGGTGGCa             <  1:3873177/100‑1 (MQ=255)

                                                                               atttatttattAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGAAGCAATTATCTCAGAACGGTGGCa             <  1:6398447/100‑1 (MQ=255)

                                                                               atttatttattAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGAAGCAATTATCTCAGAACGGTGGCa             <  1:2683919/100‑1 (MQ=255)

                                                                               atttatttattAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGAAGCAATTATCTCAGAACGGTGGCa             <  1:1823828/100‑1 (MQ=255)

                                                                               atttatttattAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGAAGCAATTATCTCAGAACGGTGGCa             <  1:4773012/100‑1 (MQ=255)

                                                                                 ttatttattAGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGAAGCAATTATCTCAGAACGGTGGCAAg           <  1:1784683/100‑1 (MQ=255)

                                                                                     ttattaGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGATAATGCATCACAACGTGAAGAATTAGCGAAGCAATTATCTCAGAACGGTGGCAAGGttt       >  1:5538258/1‑100 (MQ=255)

                                                                                      tattaGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGAAGCAATTATCTCAGAACGGTGGCAAGGTTTc      >  1:669866/1‑100 (MQ=255)

                                                                                      tattaGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGAAGCAATTATCTCAGAACGGTGGCAAGGCTTc      >  1:1035511/1‑100 (MQ=255)

                                                                                         taGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGAAGCAATTATCTCAGAACGGTGGCAAGGTTTCttt   <  1:537657/100‑1 (MQ=255)

                                                                                         taGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGAAGCAATTATCTCAGAACGGTGGCAAGGTTTCttt   <  1:1039722/100‑1 (MQ=255)

                                                                                          aGTTATAGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGAAGCAATTATCTCAGAACGGTGGCAAGGTTTCTTTa  >  1:5398122/1‑100 (MQ=255)

TATTAAACAAAGAAAGGATTTTAAGATGAATAGAAAACCTGAATTAATCATGGCTTGGATTGCAAATAGTATTAGTATTATTTATTTATTAGTTATGGGGCTATCCTATTTTTCTTTAAAAAGTGGTAATGCATCACAACGTGAAGAATTAGCGAAGCAATTATCTCAGAACGGTGGCAAGGTTTCTTTA  >  NC_007793/1099680‑1099869

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`