D3A :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,055,844	T→C	L283L (TTA→TTG)	SAUSA300_RS05175 ←	quinol oxidase subunit 2

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,055,844	0	T	C	99.8%	3460.4 / NA	1213	L283L (TTA→TTG)	SAUSA300_RS05175	quinol oxidase subunit 2
Reads supporting (aligned to +/- strand): ref base T (0/1); major base C (13/1197); minor base A (0/2); total (13/1200)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01

Only 100 of 1213 total aligned reads displayed.

GTTCGCATTTGTAATTTGAGCTTTACGAGCAGGTATTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTTAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATCAACAAACGCCATATGTGTACCATTAAATTCTAA  >  NC_007793/1055748‑1055936

 ttCGCATTTGTAATTTGAGCTTTACGAGCAGGTATTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCaagg                                                                                          <  1:5357090/100‑3 (MQ=255)

                       tcgatcttggTATTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCAAGAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACTTTTATATGc                                                                    <  1:3374062/92‑1 (MQ=255)

                       tACGAGCAGGTATTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGc                                                                    <  1:6000632/100‑1 (MQ=255)

                       tACGAGCAGGTATTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGc                                                                    <  1:1863183/100‑1 (MQ=255)

                       ccgatctaGGTATTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGc                                                                    <  1:2098645/93‑1 (MQ=255)

                         cgatctggTGTTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCAt                                                                  <  1:6328367/94‑1 (MQ=255)

                         cGAGCAGGTATTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAGCGTTTATATGCAt                                                                  <  1:84310/100‑1 (MQ=255)

                         cGAGCAGGTATTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCAt                                                                  <  1:5828926/100‑1 (MQ=255)

                           tctaGGTACTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATag                                                                <  1:1814670/97‑1 (MQ=255)

                           aGCAGGTATTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATag                                                                <  1:6142453/100‑1 (MQ=255)

                           aGCAGGTATTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATag                                                                <  1:439015/100‑1 (MQ=255)

                            gCAGGTATTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGCAATTGAAACGTTTATATGCATaga                                                               >  1:1181761/1‑100 (MQ=255)

                            gCAGGTATTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATaga                                                               <  1:2371122/100‑1 (MQ=255)

                            gCAGGTATTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATaga                                                               <  1:2798699/100‑1 (MQ=255)

                            gCAGGTATTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATaga                                                               <  1:4100870/100‑1 (MQ=255)

                            gCAGGTATTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATaga                                                               <  1:4135322/100‑1 (MQ=255)

                            gCAGGTATTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATaga                                                               <  1:4556981/100‑1 (MQ=255)

                            gCAGGTATTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATaga                                                               <  1:1441920/100‑1 (MQ=255)

                            gCAGGTATTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATact                                                               <  1:1344509/100‑3 (MQ=255)

                            gCAGGTATTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACAAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATaga                                                               <  1:3883753/100‑1 (MQ=255)

                                       tGGTTTGTCTGATATATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCt                                                    <  1:4864575/100‑1 (MQ=255)

                                       tGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTGTATGCATAGAAGATGTATTCt                                                    <  1:104878/100‑1 (MQ=255)

                                       tGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCt                                                    <  1:4302468/100‑1 (MQ=255)

                                       tGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCt                                                    <  1:6380061/100‑1 (MQ=255)

                                       tGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCt                                                    <  1:1122954/100‑1 (MQ=255)

                                       tGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCt                                                    <  1:346290/100‑1 (MQ=255)

                                       tGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCt                                                    <  1:2179771/100‑1 (MQ=255)

                                       tGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCt                                                    <  1:6610827/100‑1 (MQ=255)

                                       tGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCt                                                    <  1:3206818/100‑1 (MQ=255)

                                       tGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCt                                                    <  1:6203018/100‑1 (MQ=255)

                                       tGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCt                                                    <  1:2967355/100‑1 (MQ=255)

                                       tGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCt                                                    <  1:1735032/100‑1 (MQ=255)

                                       tGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCt                                                    <  1:1001763/100‑1 (MQ=255)

                                       tGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCt                                                    <  1:4508330/100‑1 (MQ=255)

                                       tGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCt                                                    <  1:2738221/100‑1 (MQ=255)

                                       tGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCt                                                    <  1:884039/100‑1 (MQ=255)

                                       tGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCt                                                    <  1:5688055/100‑1 (MQ=255)

                                       tGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCt                                                    <  1:2412418/100‑1 (MQ=255)

                                       tGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCt                                                    <  1:4729504/100‑1 (MQ=255)

                                       tGGTTTGTCTGATACATCTTTAAACATATTTTCGTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGATGATGTATTCt                                                    <  1:6548020/100‑1 (MQ=255)

                                         gTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTgg                                                  <  1:1619933/100‑1 (MQ=255)

                                         gTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTgg                                                  <  1:3927381/100‑1 (MQ=255)

                                           ttGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGAt                                                <  1:5471505/100‑1 (MQ=255)

                                                 gATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctg                                          <  1:3157356/100‑1 (MQ=255)

                                                   tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:1547171/100‑1 (MQ=255)

                                                   tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:4604783/100‑1 (MQ=255)

                                                   tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:2622892/100‑1 (MQ=255)

                                                   tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:2293638/100‑1 (MQ=255)

                                                   tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:5147947/100‑1 (MQ=255)

                                                   tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:2926543/100‑1 (MQ=255)

                                                   tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:1241154/100‑1 (MQ=255)

                                                   tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:3042692/100‑1 (MQ=255)

                                                   tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:5886027/100‑1 (MQ=255)

                                                   tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:1925609/100‑1 (MQ=255)

                                                   tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:5261386/100‑1 (MQ=255)

                                                   tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:4048191/100‑1 (MQ=255)

                                                   tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:3983802/100‑1 (MQ=255)

                                                   tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:6425272/100‑1 (MQ=255)

                                                   tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:3817693/100‑1 (MQ=255)

                                                   tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:6463337/100‑1 (MQ=255)

                                                   tACATCTTTAAACAGATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:4973048/100‑1 (MQ=255)

                                                     cATCTTTAAACATCTTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAAGTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:6260547/100‑1 (MQ=255)

                                                     cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:1990061/100‑1 (MQ=255)

                                                     cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:5185048/100‑1 (MQ=255)

                                                     cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:5649943/100‑1 (MQ=255)

                                                     cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:5939952/100‑1 (MQ=255)

                                                     cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:1389018/100‑1 (MQ=255)

                                                     cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:6102914/100‑1 (MQ=255)

                                                     cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:4252318/100‑1 (MQ=255)

                                                     cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:20443/100‑1 (MQ=255)

                                                     cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:710498/100‑1 (MQ=255)

                                                     cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGACTGCTgg                                      <  1:5105310/100‑1 (MQ=255)

                                                     cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATCGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:2512328/100‑1 (MQ=255)

                                                     cATCTTTAAACATATTTTCTTCACAAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAGCGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:5574605/100‑1 (MQ=255)

                                                     cATCTTTAAACATAGTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:4791049/100‑1 (MQ=255)

                                                      aTCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTggg                                     <  1:932823/100‑2 (MQ=255)

                                                      aTCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTggg                                     <  1:5313796/100‑2 (MQ=255)

                                                      aTCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTggg                                     <  1:3623771/100‑2 (MQ=255)

                                                      aTCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTggc                                     <  1:503938/100‑2 (MQ=255)

                                                       tCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTggct                                    <  1:2685815/100‑3 (MQ=255)

                                                       tCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGAt                                    <  1:4445828/100‑1 (MQ=255)

                                                        cTTTAAACATATTTCCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATc                                   <  1:4906839/100‑1 (MQ=255)

                                                         tttAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATca                                  <  1:2855107/100‑1 (MQ=255)

                                                          ttAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATcat                                 <  1:4211632/100‑2 (MQ=255)

                                                                   ttttCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATCAACAAACGCCa                        <  1:6053742/100‑1 (MQ=255)

                                                                    tttCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATCAACAAACGCCat                       <  1:1681557/100‑1 (MQ=255)

                                                                     ttcttcACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATCAACAAACGCCata                      <  1:4670613/100‑1 (MQ=255)

                                                                     ttcttcACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATCAACAAACGCCata                      <  1:5754915/100‑1 (MQ=255)

                                                                     ttcttcACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATCAACAAACGCCagg                      <  1:764922/100‑3 (MQ=255)

                                                                      tcttcACTAGTGAAGTTTGGATCTTTCACTTCGAAATTGAAACGTTTATATGCATAGAAGATGTATGCTGGATCGGCTGCTGGATCAACAAACGCCatat                     <  1:4352178/100‑1 (MQ=255)

                                                                      tcttcACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATCAACAAACGCCatat                     <  1:3683813/100‑1 (MQ=255)

                                                                      tcttcACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATCAACAAACGCCataa                     <  1:5404340/100‑2 (MQ=255)

                                                                        ttcACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATCAACAAACGCCATAtgt                   <  1:4177606/100‑1 (MQ=255)

                                                                         tcACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATCAACAAACGCCATAtgtg                  <  1:3588014/100‑1 (MQ=255)

                                                                          cACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATCAACAAACGCCATATgtgt                 <  1:3551375/100‑1 (MQ=255)

                                                                           aCTAGTGAAGTTTGGAACTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATCAACAAACGCCATATGTGTa                <  1:3750306/100‑1 (MQ=255)

                                                                            cTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATCAACAAACGCCATATGTGTAc               <  1:3294854/100‑1 (MQ=255)

                                                                             tAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATCAACAAACGCCATATGTGTAcc              <  1:3096137/100‑1 (MQ=255)

                                                                             tAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATCAACAAACGCCATATGTGTAcc              <  1:2580695/100‑1 (MQ=255)

                                                                                        ggATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATCAACAAACGCCATATGTGTACCATTAAATTCTa   <  1:1501069/100‑1 (MQ=255)

GTTCGCATTTGTAATTTGAGCTTTACGAGCAGGTATTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTTAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATCAACAAACGCCATATGTGTACCATTAAATTCTAA  >  NC_007793/1055748‑1055936

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`