Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007793 1,054,642 G→A G317G (GGC→GGT)  SAUSA300_RS05170 ← cytochrome ubiquinol oxidase subunit I

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077931,054,6420GA99.1% 306.6 / NA 110G317G (GGC→GGT) SAUSA300_RS05170cytochrome ubiquinol oxidase subunit I
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base A (10/99);  minor base C (0/1);  total (10/100)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01

Only 100 of 111 total aligned reads displayed.

AATCAGCATTGTTGAAATTGAGAAGAATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATGCCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGCGAATGTCGGGATAATTTCTGAGTAAATACCAAATGCTGGAA  >  NC_007793/1054543‑1054733
                                                                                                   |                                                                                           
gaTCTGCATTGTTGAAATTGAGAAGAATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATg                                                                                             <  1:6423936/99‑1 (MQ=255)
     gCATTGTTGAAATTGAGAAGAATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGc                                                                                        <  1:2559652/100‑1 (MQ=255)
     gCATTGTTGAAATTGAGAAGAATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGc                                                                                        <  1:5394365/100‑1 (MQ=255)
     gCATTGTTGAAATTGAGAAGAATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGc                                                                                        <  1:5199051/100‑1 (MQ=255)
     gCATTGTTGAAATTGAGAAGAATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGc                                                                                        <  1:2192479/100‑1 (MQ=255)
     gCATTGTTGAAATTGAGAAGAATGAGTTGATTAACGCACCAGTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGc                                                                                        <  1:2270724/100‑1 (MQ=255)
        ttgttgAAATTGAGAAGAATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGt                                                                                     <  1:2847341/100‑1 (MQ=255)
        ttgttgAAATTGAGAAGAATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGt                                                                                     <  1:6225103/100‑1 (MQ=255)
        ttgttgAAATTGAGAAGAATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGt                                                                                     <  1:439585/100‑1 (MQ=255)
        ttgttgAAATTGAGAAGAATGAGTTGATTAACGCACCACTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAATGCGATACCGGCAGt                                                                                     <  1:1446827/100‑1 (MQ=255)
         tgttgAAATTGAGAAGAATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGtt                                                                                    <  1:6520121/100‑1 (MQ=255)
         tgttgAAATTGAGAAGAATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGtg                                                                                    <  1:1867336/100‑2 (MQ=255)
          gttgAAATTGAGAGGAATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGtcg                                                                                   <  1:6187919/100‑3 (MQ=255)
          gttgAAATTGAGAAGAATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTg                                                                                   <  1:4655167/100‑1 (MQ=255)
          gttgAAATTGAGAAGAATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTg                                                                                   >  1:1770865/1‑100 (MQ=255)
             gAAATTGAGAAGAATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGccc                                                                                <  1:3840415/100‑1 (MQ=255)
             gAAATTGAGAAGAATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGccc                                                                                <  1:2866913/100‑1 (MQ=255)
             gAAATTGAGAAGAATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGccc                                                                                <  1:1668479/100‑1 (MQ=255)
                 ttGAGAAGAATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCccatca                                                                            <  1:6522473/100‑3 (MQ=255)
                  tGAGAAGAATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCccatacc                                                                           <  1:447352/100‑1 (MQ=255)
                  tGAGAAGAATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCccatacc                                                                           <  1:2716962/100‑1 (MQ=255)
                  tGAGAAGAATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCccatacc                                                                           <  1:5604500/100‑1 (MQ=255)
                  tGAGAAGAATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCccatacc                                                                           <  1:5157123/100‑1 (MQ=255)
                  tGAGAAGAATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCccatacc                                                                           <  1:6609249/100‑1 (MQ=255)
                    agaagaATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCccataccat                                                                         <  1:5632677/100‑1 (MQ=255)
                    agaagaATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCccataccat                                                                         <  1:4737459/100‑1 (MQ=255)
                    agaagaATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCccataccat                                                                         <  1:5382366/100‑1 (MQ=255)
                    agaagaATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCccataccat                                                                         <  1:5085105/100‑1 (MQ=255)
                    agaagaATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCccataccat                                                                         <  1:5712005/100‑1 (MQ=255)
                    agaagaATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCccataccag                                                                         <  1:3562216/100‑2 (MQ=255)
                    agaagaATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCccataccag                                                                         <  1:958363/100‑2 (MQ=255)
                     gaagaaTGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCccataccata                                                                        <  1:3662461/100‑1 (MQ=255)
                      aagaaTGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCccataccatat                                                                       <  1:5356748/100‑2 (MQ=255)
                      aagaaTGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCccataccatag                                                                       <  1:3755020/100‑2 (MQ=255)
                      aagaaTGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCccataccacag                                                                       <  1:6527860/100‑4 (MQ=255)
                      aagaaTGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCcataccatac                                                                       <  1:1279797/100‑1 (MQ=255)
                      aagaaTGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCcataccacac                                                                       <  1:1600500/100‑1 (MQ=255)
                       agaaTGAGTTGATTAGCGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACt                                                                      <  1:1630329/100‑1 (MQ=255)
                        gaaTGAGTTGATTAACGCACCATTCCCCATTGTGAAGAAATGGTGAACCCACACTAAGAAACTAAGGAACGCGATCCCGGCAGTTGCCCATACCATACtt                                                                     <  1:4044613/100‑1 (MQ=255)
                        gaaTGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACtt                                                                     <  1:2476542/100‑1 (MQ=255)
                        gaaTGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACtt                                                                     <  1:2074631/100‑1 (MQ=255)
                        gaaTGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACtt                                                                     <  1:2251461/100‑1 (MQ=255)
                         aaTGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACttt                                                                    <  1:4426684/100‑1 (MQ=255)
                          aTGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACttta                                                                   <  1:1808038/100‑2 (MQ=255)
                          aTGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACTTTg                                                                   <  1:3241347/100‑1 (MQ=255)
                          aTGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACTTTg                                                                   <  1:3972453/100‑1 (MQ=255)
                          aTGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACTTTg                                                                   <  1:2293028/100‑1 (MQ=255)
                          aTGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACTTTg                                                                   <  1:4990203/100‑1 (MQ=255)
                          aTGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAAAAACTAAGGAACGCGATACCGGCAGTTGCCGATACCATCCTTTg                                                                   <  1:5637726/100‑1 (MQ=255)
                           tGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACTTTGa                                                                  <  1:1793899/100‑1 (MQ=255)
                            taGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACTTTGAt                                                                 >  1:2739881/2‑100 (MQ=255)
                            gAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACTTTGag                                                                 <  1:4801635/100‑2 (MQ=255)
                             aGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACTTTGagc                                                                <  1:5692482/100‑3 (MQ=255)
                              gTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACTTTGagct                                                               <  1:4142577/100‑4 (MQ=255)
                               ttGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTc                                                              <  1:4809352/100‑1 (MQ=255)
                                tGATTAACGCACCACTACCCATTGTGAAGAAATGGTTAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATTCTTTGATGTcc                                                             <  1:4987379/100‑1 (MQ=255)
                                 gATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCg                                                            <  1:684265/100‑1 (MQ=255)
                                 gATTAACGCACCATCACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCg                                                            <  1:4916667/100‑1 (MQ=255)
                                    tAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAAt                                                         <  1:6141061/100‑1 (MQ=255)
                                            cATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCtt                                                 <  1:6540063/100‑1 (MQ=255)
                                               tACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATGCTTTGATGTCCGAATAAACGCTTACg                                              <  1:3026564/100‑1 (MQ=255)
                                               tACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACg                                              <  1:606053/100‑1 (MQ=255)
                                               tACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACg                                              <  1:2001010/100‑1 (MQ=255)
                                               tACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCAGACTTTGATGTCCGAATAAACGCTTACg                                              <  1:4175136/100‑1 (MQ=255)
                                               tACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATAACATACTTTGATGTCCGAATAAACGCTTACg                                              <  1:5177272/100‑1 (MQ=255)
                                                aCCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGa                                             >  1:5090524/1‑100 (MQ=255)
                                                 cccATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAg                                            <  1:5806312/100‑1 (MQ=255)
                                                      tgtgAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGCGAAt                                       >  1:197387/1‑100 (MQ=255)
                                                      tgtgAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGCGAAt                                       >  1:2199480/1‑100 (MQ=255)
                                                               aTGGTGAACCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGCGAATGTCGGGATa                              <  1:1562143/100‑1 (MQ=255)
                                                                      aCCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGCGAATGTCGGGATAATTTCTg                       <  1:2680706/100‑1 (MQ=255)
                                                                      aCCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGCGAATGTCGGGATAATTTCTg                       <  1:5219978/100‑1 (MQ=255)
                                                                      aCCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGCGAATGTCGGGATAATTTCTg                       <  1:4060599/100‑1 (MQ=255)
                                                                      aCCCAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGCGAACGTCGGGATAATTTCTg                       <  1:1933757/100‑1 (MQ=255)
                                                                       cccAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGCGAATGTCGGGATAATTTCTgg                      <  1:5098927/100‑2 (MQ=255)
                                                                         cAACCTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACGTTGATGCGCAAATAAACGCTTACGAGCGAATGGCGGGATAATTTCTGAGt                    <  1:5682920/100‑1 (MQ=255)
                                                                         cAAACTAAGAAACTAAGGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGCGAATGTCGGGATAATTTCTGAGt                    <  1:3789081/100‑1 (MQ=255)
                                                                          aaactaagaaactaagGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGCGAATGTCGGGATAATTTCTGAGTa                   <  1:1165148/100‑1 (MQ=255)
                                                                          aaactaagaaactaagGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGAGAATGTCGGGATAATTTCTGAGTa                   <  1:6099844/100‑1 (MQ=255)
                                                                               aagaaactaagGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGCGAATGTCGGGATAATTTCTGAGTAAATAc              >  1:1242239/1‑100 (MQ=255)
                                                                               aagaaactaagGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGCGAATGTCGGGATAATTTCTGAGTAAATAc              >  1:4300359/1‑100 (MQ=255)
                                                                               aagaaactaagGAACGCAATACCGGCAGTTGCCCATACCATAATTTGATGTCCGAATAAACGCTTACGAGCGAATGCCGGGATAATCTCTGactggtgat              >  1:254920/1‑92 (MQ=255)
                                                                                agaaactaagGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGCGAATGTCGGGATAATTTCTGAGTAAATAcc             <  1:5217598/100‑1 (MQ=255)
                                                                                 gaaactaagGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGCGAATGTCGGGATAATTTCTGAGTAAATACCa            <  1:3546644/100‑1 (MQ=255)
                                                                                  aaactaagGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGCGAATGTCGGGATAATTTCTGAGTAAATACCag           <  1:5220488/100‑2 (MQ=255)
                                                                                  aaactaagGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGCGAATGTCGGGATAATTTCTGAGTAAATACCaa           <  1:116257/100‑1 (MQ=255)
                                                                                   aactaagGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGCGAATGTCGGGATAATTTCTGAGTAAATACCaaa          <  1:610464/100‑1 (MQ=255)
                                                                                    actgagGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGCGAATGTCGGGATAATTTCTGAGTAAATACCAAAt         <  1:2299716/100‑1 (MQ=255)
                                                                                       aagGAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGCGAATGTCGGGATAATTTCTGAGTAAATACCAAATGCt      >  1:3222180/1‑100 (MQ=255)
                                                                                        agGAACGCGATACCGGCAGTTGCCCATACCATAAGGTGATGTCCGAATAAACGCTTACGAGCGAATGTGGGGATAATTACTGAGTAAATACCAAATGCTg     <  1:4816088/100‑1 (MQ=255)
                                                                                         ggAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGCGAATGTCGGGATAATTTCTGAGTAAATACCAAATGCggg    <  1:4471187/100‑1 (MQ=255)
                                                                                         ggAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGCGAATGTCGGGATAATTTCTGAGTAAATACCAAATGCTgg    <  1:2988057/100‑1 (MQ=255)
                                                                                         ggAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGCGAATGTCGGGATAATTTCTGAGTAAATACCAAATGCTgg    <  1:1806489/100‑1 (MQ=255)
                                                                                         ggAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGCGAATGTCGGGATAATTTCTGAGTAAATACCAAATGCTga    <  1:3135358/100‑2 (MQ=255)
                                                                                          gtgcgcgATACCGTCAGTTGCCCATACCATATTTTGATTTTCGAATAATCGCTTACGATTTATTGTCGGGATTTTTTTTGAGTAAATACCAAATGCTGGa   <  1:6461726/97‑1 (MQ=255)
                                                                                          gAACGCGATACCGGTAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGCGAATGTCGGGATAATTTCTGAGTAAATACCAAATGCTGGa   <  1:4897783/100‑1 (MQ=255)
                                                                                          gAACGCGATACCGGCAGTTGCCCATACCATGCTTTGATGTCCGAATAAACGCTTACGAGCGAATGTCGGGATAATTTCTGAGTAAATACCAAATGCTGGa   <  1:1579309/100‑1 (MQ=255)
                                                                                          gAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGCGAGTGTCGGGATAATTTCTAAGTAAATACCAAATGCTGGa   <  1:6325813/100‑1 (MQ=255)
                                                                                          gAACGCGATACCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGCGAATGTCGGGATAATTTCTGAGTAAATACCAAATGCTggg   <  1:3526634/100‑2 (MQ=255)
                                                                                           aaCGCGATACCGGCAGTTGCCCATACCATCCTTTGATGTCCGAATAAACGCTTACGAGCGAATGTCGGGATAATTTCTGAGTAAATACCAAATGCTGGag  <  1:5821625/100‑2 (MQ=255)
                                                                                                   |                                                                                           
AATCAGCATTGTTGAAATTGAGAAGAATGAGTTGATTAACGCACCATTACCCATTGTGAAGAAATGGTGAACCCAAACTAAGAAACTAAGGAACGCGATGCCGGCAGTTGCCCATACCATACTTTGATGTCCGAATAAACGCTTACGAGCGAATGTCGGGATAATTTCTGAGTAAATACCAAATGCTGGAA  >  NC_007793/1054543‑1054733

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑