| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 1,013,607 | T→A | V121E (GTG→GAG) | SAUSA300_RS04960 → | Serine protease HtrA‑like |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 1,013,607 | 0 | T | A | 98.9% | 243.6 / NA | 90 | V121E (GTG→GAG) | SAUSA300_RS04960 | Serine protease HtrA‑like |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (89/0); minor base G (1/0); total (90/0) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AATCAGGATAGTAAGTCAGCATATAACAGAGATCATTATTTAACAGACGATGTATCTAAAAAACAAAATTCATTAGATTCAGTGGACCAAGATACAGTGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTAAGTTCAG > NC_007793/1013510‑1013702 | aaTCAGGATAGTAAGTCAGCATATAACAGAGATCATTATTTAACAGACGATGTATCTAAAAAACAAAATTCATTAGATTCAGTGGACCAAGATACAgaga > 1:1797174/1‑100 (MQ=255)aaTCAGGATAGTAAGTCAGCATATAACAGAGATCATTATTTAACAGACGATGTATCTAAAAAACAAAATTCATTAGATTCAGTGGACCAAGATACAgaga > 1:611255/1‑100 (MQ=255) aTCAGGATAGTAAGTCAGCATATAACAGAGATCATTATTTAACAGACGATGTATCTAAAAAACAAAATTCATTAGATTCAGTGGACCAAGATACAGAGaa > 1:4132692/1‑100 (MQ=255) tAGTAAGTCAGCATATAACAGAGATCATTATTTAACAGACGATGTATCTAAAAAACAAAATTCATTAGATTCAGTGGACCAAGATACAGAGAAATCaaaa > 1:850576/1‑100 (MQ=255) aGTAAGTCAGCATATAACAGAGATCATTATTTAACAGACGATGTATCTAAAAAACAAAATTCATTAGATTCAGTGGACCAAGATACAGAGAAATCAAAat > 1:18665/1‑100 (MQ=255) aGTAAGTCAGCATATAACAGAGATCATTATTTAACAGACGATGTATCTAAAAAACAAAATTCATTAGATTCAGTGGACCAAGATACAGAGAAATCAAAat > 1:2360301/1‑100 (MQ=255) cAGCATATAACAGAGATCATTATTTAACAGACGATGTCTCTAAAAAACAAAATTCATTAGATTCAGTGGACCAAGATACAGAGAAATCAAAATATTATGa > 1:930501/1‑100 (MQ=255) aGCATATAACAGAGATCATTATTTAACAGACGATGTATCTAAAAAACAAAATTCATTAGATTCAGTGGACCAAGATACAGAGAAATCAAAATATTATGAg > 1:5328857/1‑100 (MQ=255) gCATATAACAGAGATCATTATTTAACAGACGATGTATCTAAAAAACAAAATTCATTAGATTCAGTGGACCAAGATACAGAGAAATCAAAATATTATGAGc > 1:6413750/1‑100 (MQ=255) cctataACAGAGATCATTATTTAACAGACGATGTATCTAAAAAACAAAATTCATTAGATTCAGTGGACCAAGATACAGAGAAATCAAAATATTATGAGCa > 1:1562545/3‑100 (MQ=255) ctataACAGAGATCATTATTTAACAGACGATGTATCTAAAAAACAAAATTCATTAGATTCAGTGGACCAAGATACAGAGAAATCAAAATATTATGAGCaa > 1:5310859/2‑100 (MQ=255) ataACAGAGATCATTATTTAACAGACGATGTATCTAAAAAACAAAATTCATTAGATTCAGTGGACCAAGATACAGAGAAATCAAAATATTATGAGCaaga > 1:3710444/1‑98 (MQ=255) ataACAGAGATCATTATTTAACAGACGATGTATCTAAAAAACAAAATTCATTAGATTCAGTGGACCAAGATACAGAGAAATCAAAATATTATGAGCaaca > 1:6472864/1‑98 (MQ=255) ataACAGAGATCATTATTTAACAGACGATGTATCTAAAAAACAAAATTCATTAGATTCAGTGGACCAAGATACAGAGAAATCAAAATATTATGAGCaaaa > 1:2122715/1‑100 (MQ=255) ataACAGAGATCATTATTTAACAGACGATGTATCTAAAAAACAAAATTCATTAGATTCAGTGGACCAAGATACAGAGAAATCAAAATATTATGAGCaaaa > 1:1134949/1‑100 (MQ=255) ataACAGAGATCATTATTTAACAGACGATGTATCTAAAAAACAAAATTCATTAGATTCAGTGGACCAAGATACAGAGAAATCAAAATATTATGAGCaaaa > 1:5460468/1‑100 (MQ=255) tAACAGACGATGTATCTAAAAAACAAAATTCATTAGATTCAGTGGACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATc > 1:2734928/1‑100 (MQ=255) tAACAGACGATGTATCTAAAAAACAAAATTCATTAGATTCAGTGGACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATc > 1:1922411/1‑100 (MQ=255) gaaCAGACGATGTATCTAAAAAACAAAATTCATTAGATTCAGTGGACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATc > 1:3040926/2‑100 (MQ=255) caCAGACGATGTATCTAAAAAACAAAATTCATTAGATTCAGTGGACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTAAAGCGACTTTATCa > 1:4870135/2‑100 (MQ=255) aCAGACGATGTATCTAAAAAACAAAATTCATTAGATTCAGTGGACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCaa > 1:4467100/1‑100 (MQ=255) aCAGACGATGTATCTAAAAAACAAAATTCATTAGATTCAGTGGACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCaa > 1:1644502/1‑100 (MQ=255) ccgACGATGTATCTAAAAAACAAAATTCATTAGATTCAGTGGACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAAc > 1:1938643/3‑100 (MQ=255) ccGATGTATCTAAAAAACAAAATTCATTAGATTCAGTGGACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTaa > 1:6322536/2‑100 (MQ=255) aaaaaaCAAAATTCATTAGATTCAGTGGACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATa > 1:6038488/1‑100 (MQ=255) aaaaaaCAAAATTCATTAGATTCAGTGGACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATa > 1:6223000/1‑100 (MQ=255) aaaaaaCAAAATTCATTAGATTCAGTGGACCAAGATACAGAGAAATCAAAATATCATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATa > 1:649928/1‑100 (MQ=255) tAGATTCAGTGGACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAGGTAGAATCAACTGa > 1:4917912/1‑100 (MQ=255) tCAGTGGACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATga > 1:2553572/1‑100 (MQ=255) ccAGTGGACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATga > 1:5572725/2‑100 (MQ=255) ccAGTGGACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATga > 1:1970110/2‑100 (MQ=255) cAGTGGACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATgag > 1:2070139/1‑100 (MQ=255) cAGTGGACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATgag > 1:4302125/1‑100 (MQ=255) cAGTGGACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATgag > 1:1329728/1‑100 (MQ=255) cAGTGGACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATgag > 1:2827469/1‑100 (MQ=255) tgTGGACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATgaga > 1:1821512/2‑100 (MQ=255) cctGGACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATgaga > 1:900683/3‑100 (MQ=255) attGGACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATgaga > 1:1062033/3‑100 (MQ=255) aGTGGACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATgaga > 1:5738136/1‑100 (MQ=255) aGTGGACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATgaga > 1:2550719/1‑100 (MQ=255) ttGGACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGaa > 1:1106433/2‑100 (MQ=255) tGGACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGaaa > 1:1040651/1‑100 (MQ=255) tGGACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGaaa > 1:5797629/1‑100 (MQ=255) ggACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAGCCGATAAAGTAGAATCAACTGAAATGAGAAAg > 1:5705264/1‑100 (MQ=255) ggACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTGGAATCAACTGAAATGAGAAAg > 1:2187282/1‑100 (MQ=255) ggACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAg > 1:3399440/1‑100 (MQ=255) ggACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAg > 1:609832/1‑100 (MQ=255) ggACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAg > 1:1917233/1‑100 (MQ=255) ggACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAg > 1:5432318/1‑100 (MQ=255) ggACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAg > 1:5058502/1‑100 (MQ=255) ggACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAg > 1:4557366/1‑100 (MQ=255) ggACCAAGATACAGAGAAATCAAAATATTACGAGCAAAATTCTGAAGCGACTTTACCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAg > 1:1442862/1‑100 (MQ=255) ttccAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGc > 1:5430098/3‑100 (MQ=255) taCCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGc > 1:3405481/2‑100 (MQ=255) gACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGc > 1:2992831/1‑100 (MQ=255) gACCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGc > 1:3857397/1‑100 (MQ=255) cccAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCt > 1:2701620/2‑100 (MQ=255) atcAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCt > 1:1178430/3‑100 (MQ=255) aCCAAGATGCAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCt > 1:1959236/1‑100 (MQ=255) aCCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCt > 1:890943/1‑100 (MQ=255) aCCAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCt > 1:1583530/1‑100 (MQ=255) ccAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTa > 1:3733758/1‑100 (MQ=255) ccAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTa > 1:3570973/1‑100 (MQ=255) ccAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTa > 1:4350765/1‑100 (MQ=255) ccAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTa > 1:395177/1‑100 (MQ=255) ccAAGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTa > 1:5010925/1‑100 (MQ=255) ccaGATACAGGGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTaa > 1:6385082/3‑100 (MQ=255) taGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTAAg > 1:5025725/2‑100 (MQ=255) gaGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTAAg > 1:1354524/2‑100 (MQ=255) caGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTAAg > 1:5592011/2‑100 (MQ=255) caGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTAAg > 1:4148446/2‑100 (MQ=255) aaGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTAAg > 1:2121653/1‑100 (MQ=255) aGATACAGAGAAATCAACATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTAAGt > 1:6519210/1‑100 (MQ=255) aGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGTGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGTAAGCTAAGt > 1:5878292/1‑100 (MQ=255) aGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGaagatcggaa > 1:3374328/1‑92 (MQ=255) aGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTAAGt > 1:169389/1‑100 (MQ=255) aGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTAAGt > 1:763295/1‑100 (MQ=255) aGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTAAGt > 1:744784/1‑100 (MQ=255) aGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTAAGt > 1:1468999/1‑100 (MQ=255) aGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTAAGt > 1:28063/1‑100 (MQ=255) aGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTAAGt > 1:5208054/1‑100 (MQ=255) aGATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTAAGt > 1:5689098/1‑100 (MQ=255) gATACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTAAGtt > 1:6210938/1‑100 (MQ=255) tACAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTAAGTTCa > 1:407285/1‑100 (MQ=255) aCAGAGGAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTAAGTTCAg > 1:5972143/1‑100 (MQ=255) aCAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTAAGTTCAg > 1:1785515/1‑100 (MQ=255) aCAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTAAGTTCAg > 1:6472784/1‑100 (MQ=255) aCAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTAAGTTCAg > 1:5255290/1‑100 (MQ=255) aCAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTAAGTTCAg > 1:2138358/1‑100 (MQ=255) aCAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTAAGTTCAg > 1:490701/1‑100 (MQ=255) aCAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTAAGTTCAg > 1:2444079/1‑100 (MQ=255) aCAGAGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGACAAGTTCAg > 1:1969642/1‑100 (MQ=255) | AATCAGGATAGTAAGTCAGCATATAACAGAGATCATTATTTAACAGACGATGTATCTAAAAAACAAAATTCATTAGATTCAGTGGACCAAGATACAGTGAAATCAAAATATTATGAGCAAAATTCTGAAGCGACTTTATCAACTAAATCAACCGATAAAGTAGAATCAACTGAAATGAGAAAGCTAAGTTCAG > NC_007793/1013510‑1013702 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |