| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 842,227 | C→A | intergenic (+588/‑54) | SAUSA300_RS04070 → / → SAUSA300_RS04075 | hypothetical protein/transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 842,227 | 0 | C | A | 99.9% | 2322.7 / NA | 821 | intergenic (+588/‑54) | SAUSA300_RS04070/SAUSA300_RS04075 | hypothetical protein/transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (1/0); major base A (817/2); minor base G (1/0); total (819/2) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.47e-01 | |||||||||||
Only 100 of 835 total aligned reads displayed.
TTGCAATTTTTGAAATAGAATAGTACTATTGCAAGTGTAAAGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACCACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGCACAGCAAAAGCTTATACCGGATCTCA > NC_007793/842146‑842326 | tacccgtgtAAAGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAaggaggag > 1:1248913/6‑100 (MQ=255) tctgtgtAAAGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGgt > 1:4311293/4‑100 (MQ=255) gtggtgtAAAGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGgt > 1:5817964/4‑100 (MQ=255) ccctggtAAAGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGgt > 1:114269/6‑100 (MQ=255) taGTGTAAAGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGgta > 1:2645830/2‑100 (MQ=255) gcctgtAAAGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAaggagaagatc > 1:2506757/4‑97 (MQ=255) ctgtgtAAAGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAaggaggtagat > 1:4550544/3‑95 (MQ=255) tgtgtAAAGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAaggaggagatcg > 1:2161776/2‑96 (MQ=255) ggtgtAAAGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAaggagcgagatc > 1:3802608/2‑93 (MQ=255) aGTGTAAAGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAaggaggagatcg > 1:5387850/1‑96 (MQ=255) gtgtAAAGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAaggaggaagatcg > 1:6617432/1‑94 (MQ=255) gtgtAAAGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGgtagt > 1:3922268/1‑100 (MQ=255) gtgtAAAGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAAGAGgcaga > 1:2438250/1‑99 (MQ=255) gtatAAAGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAgggaggagatcgg > 1:519532/4‑95 (MQ=255) ctgtAAAGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGgtagt > 1:4172253/2‑100 (MQ=255) atgtAAAGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAaggaggaagatcg > 1:1845858/2‑94 (MQ=255) tgtAAAGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGgtagta > 1:5528293/1‑100 (MQ=255) ggtAAAGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATgaggaggagatcgga > 1:4844569/2‑94 (MQ=255) ggtAAAGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGgtagat > 1:624081/2‑98 (MQ=255) agtAAAGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGgtagta > 1:4643783/2‑100 (MQ=255) gtAAAGAGGTTAGTTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAagaaggagatcggaa > 1:1591265/1‑93 (MQ=255) gtAAAGAGGTTAATTTTTGTCCCACGTGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGtagtag > 1:2964634/1‑100 (MQ=255) gtAAAGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAatgaggagatcggaa > 1:943459/1‑93 (MQ=255) gtAAAGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAagggggagatcggaa > 1:212142/1‑93 (MQ=255) gtAAAGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGatagatc > 1:556607/1‑97 (MQ=255) gtAAAGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGtagtag > 1:3518356/1‑100 (MQ=255) gtAAAGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGtagtag > 1:2796395/1‑100 (MQ=255) gtAAAGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGtagtag > 1:3107256/1‑100 (MQ=255) aaaGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTg > 1:1644865/1‑100 (MQ=255) aaGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGa > 1:1889083/1‑100 (MQ=255) gagGTTAATTTTTGTCCCACGCGGGACTTTAAAAGGCAACAACTGGTTGTCACATATCCTTATTTACATTTATAAATATTAGGAGGAGGTAGTAGTGaca > 1:1955488/1‑98 (MQ=255) agGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAg > 1:3641084/1‑100 (MQ=255) aaTCTTTGTCCCACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTa > 1:1043928/1‑100 (MQ=255) ccccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGc > 1:6184398/2‑100 (MQ=255) tccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGca > 1:500801/2‑100 (MQ=255) tacACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGca > 1:3600613/3‑100 (MQ=255) gccACGCGGGCCTTTAAAAGGCAACAACTGGTTGTGCCATATCCTTATTTACATTTATAAATATAAGGAGGTGGTAGTAGTGCAAGACTTATTGCAAGca > 1:6289569/2‑100 (MQ=255) ctcACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGca > 1:5959149/3‑100 (MQ=255) cccACGCGGGGCTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGca > 1:5663039/1‑100 (MQ=255) cccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATCAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGca > 1:613730/1‑100 (MQ=255) cccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAATACTTATTGCAAGca > 1:4916894/1‑100 (MQ=255) cccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGca > 1:1735004/1‑100 (MQ=255) cccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGca > 1:3307205/1‑100 (MQ=255) cccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGca > 1:6321512/1‑100 (MQ=255) cccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGca > 1:4453260/1‑100 (MQ=255) cccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGca > 1:6397046/1‑100 (MQ=255) cccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGca > 1:4756494/1‑100 (MQ=255) cccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGca > 1:5711348/1‑100 (MQ=255) cccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTACTGCAAGca > 1:6047233/1‑100 (MQ=255) cccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAAACTTATTGCAAGca > 1:4802915/1‑100 (MQ=255) cccACGCGGGACTTAAAAAGGCAACAACAGGTTGTGACATATACTTATTTACATTTATAAATATAAGGAGGAGGAAGTAGTGAAAGACTTATTGCAAGca > 1:5914895/1‑100 (MQ=255) accACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGca > 1:2241941/2‑100 (MQ=255) accACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGca > 1:5341877/2‑100 (MQ=255) accACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGca > 1:6468051/2‑100 (MQ=255) ctaCGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGcac > 1:1375836/3‑100 (MQ=255) ccACGCGGGACTTAAAAAGGCAACAACTGGTTTTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGcac > 1:6516174/1‑100 (MQ=255) ccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGCCTTATTGCAAGcac > 1:4894738/1‑100 (MQ=255) ccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGcac > 1:5629347/1‑100 (MQ=255) ccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGcac > 1:572689/1‑100 (MQ=255) ccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGcac > 1:1003084/1‑100 (MQ=255) ccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGcac > 1:5079175/1‑100 (MQ=255) ccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGcac > 1:6069963/1‑100 (MQ=255) ccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGcac > 1:765032/1‑100 (MQ=255) ccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGcac > 1:880118/1‑100 (MQ=255) ccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGcac > 1:2548403/1‑100 (MQ=255) ccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGcac > 1:4693050/1‑100 (MQ=255) ccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGcac > 1:3008082/1‑100 (MQ=255) ccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGcac > 1:3415505/1‑100 (MQ=255) ccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGcac > 1:3885432/1‑100 (MQ=255) ccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGcac > 1:2055572/1‑100 (MQ=255) ccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGcac > 1:4246897/1‑100 (MQ=255) ccACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGcac > 1:4368683/1‑100 (MQ=255) ccACGCGGGACTTAAAAAGGCAACAACTGGTAGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGcac > 1:2274092/1‑100 (MQ=255) acACGCGGGACTTAAAATGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGcac > 1:3712072/2‑100 (MQ=255) acACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGcac > 1:1539755/2‑100 (MQ=255) acACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGGAGTAGTGAAAGACTTATTGCAAGcac > 1:283605/2‑100 (MQ=255) cACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGcaca > 1:5123734/1‑100 (MQ=255) cACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGcaca > 1:6578419/1‑100 (MQ=255) cACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGcaca > 1:5423682/1‑100 (MQ=255) cACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGcaca > 1:4101518/1‑100 (MQ=255) cACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGcaca > 1:5273825/1‑100 (MQ=255) cACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGcaca > 1:83247/1‑100 (MQ=255) cACGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGcaca > 1:5460224/1‑100 (MQ=255) cACGCGGGACTTAAAAAGGCAACAACCGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGcaca > 1:3990390/1‑100 (MQ=255) ctgcgGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGCACAg > 1:1457391/3‑100 (MQ=255) aCGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGCACAg > 1:3467234/1‑100 (MQ=255) aCGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGCACAg > 1:3366555/1‑100 (MQ=255) aCGCGGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGCACAg > 1:693616/1‑100 (MQ=255) ttgggACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGCACAGCa > 1:2870556/3‑100 (MQ=255) gcgGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGCACAGCa > 1:3199217/1‑100 (MQ=255) gcgGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGCACAGCa > 1:1301315/1‑100 (MQ=255) gcgGGACTTAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGCACAGCa > 1:2924609/1‑100 (MQ=255) tAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGCACAGCAAAAGCTta > 1:3252251/1‑100 (MQ=255) tAAAAAGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGCACAGCAAAAGCTta > 1:271657/1‑100 (MQ=255) aaaaGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGCACAGCAAAAGCTtata > 1:2600014/1‑100 (MQ=255) caGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGCACAGCAAAAGCTTATAcc > 1:1430746/2‑100 (MQ=255) aaGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGCACAGCAAAAGCTTATAcc > 1:3046919/1‑100 (MQ=255) aaGGCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGCACAGCAAAAGCTTATAcc > 1:4498233/1‑100 (MQ=255) ggCAACAACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGCACAGCAAAAGCTTATACCgg > 1:2392478/1‑100 (MQ=255) caacaaCTGGTTGTGACATATCCTTATTTACATTTATACATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGCACAGCAAAAGCTTATACCGGAt > 1:4594704/1‑100 (MQ=255) | TTGCAATTTTTGAAATAGAATAGTACTATTGCAAGTGTAAAGAGGTTAATTTTTGTCCCACGCGGGACTTAAAAAGGCAACCACTGGTTGTGACATATCCTTATTTACATTTATAAATATAAGGAGGAGGTAGTAGTGAAAGACTTATTGCAAGCACAGCAAAAGCTTATACCGGATCTCA > NC_007793/842146‑842326 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |